Labeo rohita (rohu): 127165772
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Entry
127165772 CDS
T09007
Symbol
scarf2
Name
(RefSeq) scavenger receptor class F member 2
KO
K24319
scavenger receptor class F member 2
Organism
lroh
Labeo rohita (rohu)
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
lroh04990
]
127165772 (scarf2)
Domain-containing proteins not elsewhere classified [BR:
lroh04990
]
Laminin domain-containing proteins
Laminin EGF-like domain-containing proteins
127165772 (scarf2)
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GFIT
Motif
Pfam:
EGF_laminin
EGF_TEN
EGF_PEAR1L
EGF_2
DSL
EGF_C8A_B_C6
Motif
Other DBs
NCBI-GeneID:
127165772
NCBI-ProteinID:
XP_050966627
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All DBs
Position
5:complement(40377414..40415591)
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AA seq
921 aa
AA seq
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MLSRRGAWRDAVSSTMDLKGTLAVLVLLLLCLCPVFSQELNPKGRNVCKIPGSTGFTCCS
GWAQQGEECLTPLCEGNFTCNENEVCVRPNECRCRHGYFGASCDTKCPAQFWGPDCKGMC
TCHPNGKCDDVTGKCTCYPNRWGENCEKPCNCQKGKCDQETGKCTCHAGYWGPQCNNNCY
CSINSVCDQNTGRCICNPGWFTRNCGTQCACNNSPCEQFTGRCQCRERLWGQRCERHCQC
ANGKCNPVDGSCTCKPGYRGKLCREPCPAGFYGQNCRIKCGHCKGQQPCKVTEGHCETCE
SGWNGTKCDQMCKEGYFGENCKDQCPPCKDGHYCNRINGKCSHCNPGWIGDRCEVRCPNG
TYGENCEKDCSHCFNGDCHFATGECLCDPGFYGTYCNLTCEFGQFGVNCAQDCPCHDRNC
NPVSGACNLYPNQRMGVIAAGTLVTFLLVVLLSLLCCCFLCSNKNNRNPDQENSTNSKKA
KIILCGGFSRISTKLPRIPLRRQKLPKVVVTHHDPENTTFNSIIEPPSVVDQPSPSWSSQ
ESFSSFETSEDGPVYCVPHEETTNECCDKQNSSTVQEIPLTPNDDDAGEYTSLKDTTKQY
VNDGSEQPLLKSSDSEGSTSGSESTIGAVYAHVARLSKYSKEEEDNTSPEKTKEKTKPRP
PDPSTKPKVSWIHGTSATNPTEQSQTPSPQKEKRKNDSESSGKLDEKQRPKEKSSKNREK
HQDSKKADGPESPSKSRSQKASETIEHLNGTFQNALKKIGNFHSDKKTNDTNKDPPKSPK
IMHPHMNSEAATLLAAQLKEKTQSLNRNEGLTVGIRPNGVSTPQANREKPTPPQKTKRSA
TGTNKPLLPTSSNLQKMVAPISDSTPEPKSPGVNGTKVEGDATPKKTPIKKPPRKKGKEG
TLETEGKTTPKTAIMPPQIVK
NT seq
2766 nt
NT seq
+upstream
nt +downstream
nt
atgctgagcagaagaggcgcatggagagatgctgtttcttctaccatggatctgaagggc
actttagcggttttagtgcttttgcttctatgcttgtgtcctgttttcagccaagagctc
aatccaaagggtaggaacgtgtgcaaaattccagggtcaacagggtttacgtgttgcagc
ggatgggcgcagcaaggcgaagagtgtttaacacctctctgtgaaggcaacttcacttgt
aatgaaaacgaggtgtgtgtccgaccaaacgaatgccgctgtcgtcatggatattttgga
gcaagttgtgacacaaagtgtcctgctcagttctggggtcccgactgcaagggcatgtgt
acgtgccaccctaatggtaaatgcgacgacgtgactgggaagtgcacgtgctacccaaac
cgctggggtgagaactgtgagaagccctgcaactgtcagaaagggaaatgtgatcaggag
acggggaaatgcacctgccatgccggttactgggggccgcagtgcaacaacaattgctac
tgtagcatcaactcagtgtgcgaccagaacacgggccggtgcatctgcaaccctggctgg
tttacccgtaactgcggcactcagtgtgcgtgcaacaactcgccttgtgagcagtttacg
ggccgatgtcagtgcagggagaggctctggggtcagcgctgtgaacggcactgtcagtgc
gccaacgggaagtgtaaccctgtggatggatcgtgtacctgtaaacccggatacagagga
aagctatgccgggagccgtgtccagctgggttctatggacagaactgcagaatcaagtgt
ggccactgtaaaggccagcagccctgtaaggtgacggagggtcactgtgaaacgtgtgag
agcggctggaatgggacaaaatgtgatcagatgtgtaaggagggttacttcggagagaac
tgtaaggatcagtgtccgccatgcaaagacggtcactactgcaaccgcatcaacgggaag
tgttcccactgcaatcccggctggattggagatcgctgtgaggtgcgctgtcctaacggc
acctatggagaaaactgtgaaaaggactgcagccattgttttaatggagactgccatttt
gccacaggagagtgtctctgtgaccctggcttctatgggacatactgcaacctgacctgc
gagttcggtcagttcggagtgaactgcgcccaggactgtccatgtcacgacaggaactgc
aacccagtgtcaggagcctgcaacttatatcctaatcagcggatgggagtaatagctgcg
ggaacactggtgacgttcctgctggtggttcttctctctctgctgtgctgctgctttctc
tgtagcaacaaaaacaaccgcaaccctgaccaggaaaactccaccaacagcaagaaggcc
aaaataatcctctgcggcggattcagtcgaatcagcaccaaactccccagaatccctctg
aggagacagaaattacccaaagttgttgtcacccaccacgatcctgagaacaccaccttc
aacagtattatcgagccgccctccgtggtggaccagccttctccgtcatggtcgtcccag
gagtccttctcttcttttgagacgagtgaagatgggcctgtttactgcgtaccccacgaa
gagactacgaatgagtgctgtgacaagcaaaactctagcactgttcaagaaataccacta
acccccaatgacgatgacgcaggagagtacacatccctcaaagacacaacgaagcagtac
gttaacgatgggagcgagcagccactcctgaagtcttcagacagcgagggctccaccagt
ggttctgagtcaaccataggagccgtttacgcccatgtcgcccgcctttccaaatactcc
aaagaggaggaggacaacacttcaccggagaagacaaaagagaagacgaaacctcgtcct
ccagacccttccaccaaaccaaaggtgtcctggatccatggaacatctgcaaccaaccca
acagagcaaagccagactccgtcaccgcaaaaagagaaaagaaagaacgactcggaaagt
tctggaaagttggatgagaagcagcgaccaaaggagaagtcaagcaagaaccgtgaaaag
caccaggacagtaagaaagcagatggacccgaatcaccaagcaaaagcagatctcaaaaa
gcttcggagaccatcgagcacctcaacgggacattccagaacgccctgaagaagatcgga
aacttccactcggataagaaaacaaacgacaccaacaaagatccacccaagagcccaaag
atcatgcatccgcacatgaactctgaggccgccacgctactcgcggctcagctgaaggaa
aagacccaaagccttaaccggaacgagggtctcacggtgggcatcagacccaacggtgta
tcaacacctcaagccaaccgagagaaacccaccccacctcaaaagaccaagcgctctgca
actgggaccaacaagccccttcttcccacctccagcaacctccagaagatggtggctccc
atttcagactctacacctgaacctaaaagcccaggggttaatgggaccaaagttgaagga
gacgccacaccaaagaaaacacccatcaaaaaaccaccgagaaagaaaggaaaggaggga
acactggagacggaaggcaaaaccactccaaagacggccattatgccacctcagattgtc
aaatag
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