Labeo rohita (rohu): 127165786
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Entry
127165786 CDS
T09007
Symbol
barhl1a
Name
(RefSeq) LOW QUALITY PROTEIN: barH-like homeobox 1a
KO
K09360
BarH-like
Organism
lroh
Labeo rohita (rohu)
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lroh03000
]
127165786 (barhl1a)
Transcription factors [BR:
lroh03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ANTP: NKL
127165786 (barhl1a)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Homeodomain
DUF7645
Homeobox_KN
Motif
Other DBs
NCBI-GeneID:
127165786
NCBI-ProteinID:
XP_050966639
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Position
5:28736166..28740322
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AA seq
300 aa
AA seq
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MEVSNGSSFGIESLLSHRPSSPCMSKXGECRSPAELSPRSDLDSGCSSPPSPRRTSVEDA
VQRHARALGLDSPLQISQQPRTVTSSFLIRDILADCKPLAACAPYSSTGQSAQDAEDCMD
KLHSNSSSDSEYRVKDEADREISSSRDSPSSRLKKPRKARTAFTDHQLAQLERSFERQKY
LSVQDRMELAASLNLTDTQVKTWYQNRRTKWKRQTAVGLELLAEAGNYSALQRMFPSPYF
YPQSLVSNLDPGPGLYLYRGPSAPPPPVQRPLVPRILLHGLQGAGDPASLPGVIPRHTPR
NT seq
903 nt
NT seq
+upstream
nt +downstream
nt
atggaggtatcaaacgggtcgagctttgggatcgagtctttactttctcacagaccgagc
agtccgtgtatgtcaaagnngggggagtgcaggtctccggcggagttgagcccgcggtcg
gaccttgacagcggctgctcgtcgcctccgtccccgagacggacctcggtggaagacgcg
gtgcaaagacacgctcgggctctcggactagactctcctttacaaatatcccagcagccg
cgaacagtcacgtcctccttcctcatcagagacatactagcggactgcaaacccctggca
gcctgtgctccttattccagcactggacagtcagcacaagatgctgaagactgtatggac
aaacttcacagcaattcgtcctcggacagtgaatacagggtgaaagacgaagctgatcga
gaaatctccagcagtagagacagtcccagctcccggctgaagaagcctcgtaaagcccgc
actgcgttcactgatcaccagctggcgcagctcgaacggagcttcgagcgtcagaagtac
ctgagcgtgcaggacaggatggagctggcagcgtctctcaacctcaccgacacacaggtc
aaaacatggtaccaaaaccgcagaacgaagtggaaacggcagacagcggttggactggag
ctcctagcggaggcagggaattactcagccctacagagaatgtttccctcaccctatttt
tacccccaaagtctggtgtctaacctcgacccgggaccagggttgtatctgtacagagga
ccgtccgcgcctccaccaccggttcagcggcctctggttccgagaatcctcctgcacggt
ctccagggtgccggagacccagcatctctccctggagtgataccgcgacacacgccgcga
tga
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