Labeo rohita (rohu): 127165823
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Entry
127165823 CDS
T09007
Symbol
pomt1
Name
(RefSeq) protein O-mannosyl-transferase 1
KO
K00728
dolichyl-phosphate-mannose-protein mannosyltransferase [EC:
2.4.1.109
]
Organism
lroh
Labeo rohita (rohu)
Pathway
lroh00514
Other types of O-glycan biosynthesis
lroh00515
Mannose type O-glycan biosynthesis
lroh01100
Metabolic pathways
Module
lroh_M00872
O-glycan biosynthesis, mannose type (core M3)
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00515 Mannose type O-glycan biosynthesis
127165823 (pomt1)
00514 Other types of O-glycan biosynthesis
127165823 (pomt1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
lroh01003
]
127165823 (pomt1)
Enzymes [BR:
lroh01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.109 dolichyl-phosphate-mannose---protein mannosyltransferase
127165823 (pomt1)
Glycosyltransferases [BR:
lroh01003
]
O-Glycan biosynthesis
O-linked Man type
127165823 (pomt1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PMT
PMT_4TMC
MIR
PMT_2
Motif
Other DBs
NCBI-GeneID:
127165823
NCBI-ProteinID:
XP_050966696
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All DBs
Position
5:complement(15763909..15771273)
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AA seq
721 aa
AA seq
DB search
MQCVKLPISLTVEINLVLVTVTALALTTRLYGIHFPKAVVFDEVYYGQFLSLYMKQVFFI
DESGPPFGHMILALGAYLGGFDGNFVWNRIGAEYTSNIPVWSLRVIPALAGSFCIPLAYL
LVVELGYSHFSALGACVLLLMENSLIVQSRFMLLESVLIFFLLLAVLSYLRFHKAQNNSS
FRWFWLVICGVSCACGIGVKYMGMFTYFLLLGLAAVHTWQLIGDRTLSHGKVVVQVLVRF
LALVVLPVIMYLGFFYIHLTLLYRSGPHDQMMSSAFQASLEGGLARITQGQPLDVAFGSQ
VTLRTVSSKPVPCWLHSHKANYPIRYENGRGSSHQQQVTCYPFKDVNNWWIIKDPGRHSV
VVSSPPRPVRHGDIIQLLHGMTSRYLNTHDVAAPMSPHSQEVTGYIDFNVSMPAQNLWRV
DIVNRESDREIWKTILSEVRLVHVNTSAVLKLSGASLPEWGFKQLEVVGDKIYKGYQQSG
MWNVEEHRYGRSQEQKERELELKSPTQSDIKRNLTFMAKFFELQWKMLTVKNEESEHKYS
SSPLEWITMDTNIAYWLHPSSNAQIQLIGNIVNWSIANLALVVYCLMFLTYLLRRRRKVE
DVPQDSWEQLVLAGVVCFGGWAVNYLPFFLMEKTLFLYHYLPALTFKILQIPMVVEHLYI
HVLRSPAQRKAFGGVILAVLCSVYVSYHNLSPLTYGQPALSSDELAALRWRESWDILLRK
R
NT seq
2166 nt
NT seq
+upstream
nt +downstream
nt
atgcagtgtgtaaaactgcccatcagtttgacagtggagatcaatctggtgctggtgaca
gtgacagcactagcgctcacgaccagactatatggcattcactttcctaaagctgtagtg
tttgatgaagtttattacggacagttcctgtctctgtacatgaagcaagtgttttttatt
gatgagagtggaccaccttttggccacatgatactagctttaggagcttatttaggagga
tttgatggcaactttgtttggaacagaattggagcagaatacaccagtaacattcctgtt
tggagtcttcgggtaattccggcccttgctggctccttttgtataccacttgcttatctt
ctggtggtggagctcggatattcccatttctcagcattgggggcctgtgttctgctcctc
atggaaaactccttgattgtgcaatcacgcttcatgctgctggagtctgttttaatcttt
ttcctgctgttagctgtgctgtcttacctccgcttccacaaagcacaaaacaattcatct
tttaggtggttttggcttgtgatctgtggtgtcagttgtgcatgtggaattggggtaaag
tacatgggtatgttcacatacttcttactgctaggcctggcggctgtacacacctggcaa
cttattggagatcgaaccttaagccatggtaaagtagtggtgcaggttttggttcgcttc
ctggctcttgtggtgttacccgtcatcatgtaccttggatttttctacatccatcttacc
ctgctgtatcgtagtggaccgcatgaccagatgatgagcagtgcttttcaagcaagtcta
gagggcggcctagcgcggatcactcaggggcagcctttagatgtcgcattcggctcacaa
gtcactcttcgcactgtgtccagtaaacctgttccatgttggcttcactcccacaaggct
aattatccaatcagatatgaaaatggccgtggtagctcccaccagcagcaggtgacctgc
tatcctttcaaagacgtcaacaactggtggattattaaagaccctgggcggcacagtgtg
gtggtcagcagcccacccagacctgtcagacatggcgatattattcagctgctgcatgga
atgacctctcgctaccttaacacgcatgatgttgcagcaccaatgagtcctcattcacag
gaagtgactggctacattgactttaatgtttctatgcctgctcagaatctatggagagtg
gacatagtgaacagggagtccgatagagagatctggaagacgattttatcagaggtgcga
ctagtccacgtgaacacttcagctgttttaaagctcagtggagcgtctctgccagagtgg
ggtttcaaacagctggaggtggttggggataagatttataaaggttaccagcagagtggc
atgtggaacgtggaagagcatcgttacggcagaagtcaggaacagaaggaaagggagttg
gagctgaaatcacctacccagagtgacatcaaaagaaacctcacttttatggccaaattt
tttgagctgcagtggaagatgctgacagtaaagaatgaagagtctgagcacaaatatagt
tcatcacctttggaatggatcacaatggacaccaacattgcatactggcttcatccttca
agtaatgcacaaattcagctgatagggaatattgttaattggtccattgcaaaccttgcg
ctggttgtttactgtcttatgtttctaacctacttactaagacggcggaggaaagttgaa
gacgttcctcaagactcttgggagcagctggttttggctggtgttgtttgttttggaggc
tgggcagtgaattacctgccattcttcctaatggagaagactctgtttctgtaccactat
cttccagcgctcaccttcaagatcttgcagatacctatggttgtagagcacctgtacatc
catgtattgagatctccagctcaacggaaagcatttggtggtgttattctggcagtcctt
tgttcagtgtacgtgtcctatcacaacttgagtcctctgacctacggccagccagcatta
tcgtcagatgagcttgctgcactgcgctggagagagagctgggatattcttctacgaaaa
cgctga
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