Labeo rohita (rohu): 127165871
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Entry
127165871 CDS
T09007
Symbol
arap1a
Name
(RefSeq) arf-GAP with Rho-GAP domain, ANK repeat and PH domain-containing protein 1 isoform X1
KO
K18439
Arf-GAP with Rho-GAP domain, ANK repeat and PH domain-containing protein 1
Organism
lroh
Labeo rohita (rohu)
Pathway
lroh04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
127165871 (arap1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lroh04131
]
127165871 (arap1a)
Membrane trafficking [BR:
lroh04131
]
Endocytosis
Arf GTPases and associated proteins
Arf associated proteins
127165871 (arap1a)
Endosome - Golgi transport
Arf GTPase associated proteins
127165871 (arap1a)
Others
Rho GTPase associated proteins
Rho GTPase-activating proteins
127165871 (arap1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RhoGAP
ArfGap
PH
PH_11
PH_8
PH_3
RA
SOS1_NGEF_PH
PH_2
PH_6
PH_4
Ank_2
Motif
Other DBs
NCBI-GeneID:
127165871
NCBI-ProteinID:
XP_050966778
LinkDB
All DBs
Position
5:32452406..32477349
Genome browser
AA seq
1091 aa
AA seq
DB search
MALKQEDLLRDMQKCFINLKAEEDRKETVNWREREDSIDIQCTDFPDFSEDFRQIVKAGW
LEKTPPKGGKIYQRRWVQLDSEYLRYFQSIKEVYSKRMVSLGSVDKVVSVGDLRFELRSQ
SRTFLFRAESTQERNDWVCCIEKILSDRKQHLEPRNLFFRNGSVNISFEGYMEMLSPRTK
VYTLISKDKLFIFKSHEEYFQGVGITDIDMRMANVRDGENKRSFTLTTPYRAFSFMVDSE
SEKQRWCEALTECVSRALSCEGLCESIWRVPSNRLCADCSSSMPEWASINLCVLLCEKCA
GAHRSLGQNVSKVRSLKLDERVWTDDLIRVFLLLGNGKANQFWGANIPPSESLCSSANSE
KRLEHITAKYKDGKYRKYHILYGQQEALNSALCSAVQSGDLLETLSLLNCGADINCNTGI
PELPTPLSLAKRSGQTVQAELLMQNLSTESFTRVDKDVSIRSQCGYLFKTASSARPITDH
KTKADFTQRWCSLNDGMFNYFKSEQSHNKCGGMKTSEIICVSVNSPGKHGYEYTFELYSE
EGRVYLFGSDDGSIVKNWIRTIAMAVLPPALFDVCGTCERLGRLRCAEGNHGIGWFCLSG
FKLQVLLEDNVQTIDLRKLVTLNFSDSAGSMVLVWRGGPLHLLADRRPHFVGWQTFIQQR
SGAGDQPLSQQQLTEVGVPVTVDRCLDHITRNGLMSSGIYRKSGINSRVTKLLERFQNDA
RSVTMLESDYSVDDMANTLKRFLREVKDGVFNGQENSDSWLRAAGLKDRGEKVHRYQILL
SNLPEVNRETLKALIHHLVCVQHLSDENQMTIRNLGIVFGPTLFQTDGKDVTGSQVVEEL
IQNYCSIFNVSESDLQRQLNMTSEILNKHKSQRPLSRTPSSTICAVYLEKIDEGAEVLVQ
IAADMTVVKLVSVVLELKGIQQANEEFWSCYEVLEKDKMERTLHYQERVLPIYFSLSCQS
HLLIKRNHFIFSIMRFLEDIENLCKSGPLRVCEFKNESSKNFHTRHCELSGTTFKLHKEL
QGSPCEREYPVKELKLYHGCRSKLHPPTPWGLTLIHDKQQWYLCCENEDELTEWTATFYS
IQYNGDIWPSW
NT seq
3276 nt
NT seq
+upstream
nt +downstream
nt
atggccttaaagcaggaggatctgttgcgagatatgcagaagtgttttatcaacctgaaa
gctgaagaggatagaaaagagacagtaaattggagagaacgtgaggacagtattgatatc
caatgtacagactttcctgatttctcagaggatttccgtcagattgttaaagccggctgg
ctagagaaaactcctccgaaaggtgggaagatttatcagcgccgatgggtgcaactggat
tcagaatatttgagatattttcaatccataaaggaagtatactctaaaaggatggtgtct
ctgggatctgttgataaggtggtcagtgttggagacttgagatttgagctccgcagtcag
agccgcactttcctgtttcgggcggaaagcactcaggaaagaaatgactgggtgtgctgt
attgaaaagattctgagtgatcgcaaacaacatctggagccccggaatttgttctttaga
aacggaagtgtgaatattagtttcgagggctacatggagatgttgtcaccacgcaccaaa
gtctacacacttattagcaaggacaaactgttcatctttaagagccatgaggaatatttt
cagggtgtaggcatcactgatatagacatgcgaatggccaatgtgagagatggagaaaac
aagcgttctttcacgctcaccactccgtacagagcattcagttttatggtggattcagaa
agtgagaagcagagatggtgtgaggcgcttactgagtgtgtgagtcgcgctctgtcctgt
gaagggttgtgtgagagcatttggcgtgtgccatcaaaccgtttgtgtgcggactgcagc
tcttcgatgccggagtgggcttcaatcaacctgtgtgttctgctgtgtgaaaagtgtgca
ggtgcacacagaagtctgggccagaatgtgtcaaaggttcgcagtctgaagctggatgaa
cgagtgtggactgatgacctcatcagggttttcctgctgctgggtaacggcaaagcaaat
cagttctggggtgcaaatattcccccgagtgagagtctctgttcgagcgcgaacagcgag
aaacgtcttgaacacatcacagcaaaatacaaagatggaaaatatcgcaaataccacata
ctctatggccagcaggaggcgctcaacagtgctctgtgttcagcggtgcagtctggtgat
ttgttggagactctctcgctgctgaattgtggggcggatatcaactgcaacactggtatc
ccagaactccctactccactgtctctggccaaacgcagtggccaaacagtacaagcagag
ctgcttatgcagaacttgagcacagagtcgtttacacgagtggataaagatgtctccatt
cgatctcagtgtggctatctttttaagaccgcttcatcagctcggccaatcacagatcac
aaaaccaaagcagatttcactcagcgttggtgttctcttaatgatggaatgttcaactac
tttaagagtgaacagagtcacaataagtgtggtggcatgaagaccagtgaaatcatctgc
gtgtctgtcaacagcccagggaaacatggctatgaatacacatttgagctgtactcagag
gaggggagagtctacctatttggatctgatgatggcagcattgtgaagaactggatccga
actattgccatggctgtgctgcctcctgcactgtttgatgtgtgtggaacctgtgaacgt
ctgggtcgcctgcgctgcgctgagggcaatcatggcattggttggttttgcttgagcggc
ttcaaactgcaggtgttactggaagacaatgtacaaacaatcgacctccgcaagctagtc
acacttaatttctctgacagtgctggctccatggtgcttgtttggagaggtgggcctctg
catttgctggctgaccgcaggcctcattttgtgggctggcagaccttcattcagcagaga
tctggtgctggagatcagccactatcacaacagcaactcactgaagtgggtgtccctgtg
actgttgaccgttgcctggaccatataacacgtaacggacttatgtcatcaggaatctac
cgaaagagtggcattaattctcgtgtgaccaaactgctggagaggtttcaaaatgatgca
cgaagtgtaacaatgcttgagtcagactattctgtggatgacatggctaacacgctgaaa
cgatttctcagggaggttaaagatggagtgtttaatggacaagaaaacagcgacagctgg
cttagagcagcaggtctgaaggacagaggtgagaaggttcatagataccagattctcctt
tcaaacctcccagaagttaacagagaaacactcaaagcactcatacaccacctggtttgc
gttcagcacctgtctgatgagaatcagatgactatacgaaaccttggtatcgtattcggt
ccaacactttttcagactgatggaaaagatgtcacaggatctcaggtggtggaggaactg
atccaaaactactgcagcatttttaatgtctcagagtcagaccttcagaggcagctaaac
atgacatctgaaatcctgaataagcacaagtcccagaggcccttaagtcgaactccttcc
agcaccatttgtgctgtttacctagagaagatagatgagggtgcggaggtgcttgttcag
attgcagcagatatgacagtagtcaagttggtttctgtggttttggagcttaaaggaatt
cagcaggccaatgaagaattctggagctgctatgaagttctagagaaagacaaaatggag
agaacgctgcattaccaggaaagagtgctgccaatctatttctctcttagttgtcagtct
cacctgctgatcaagaggaatcactttatcttcagcatcatgaggttcctggaggatata
gagaatctatgtaaaagtggaccattgcgtgtttgtgagtttaaaaatgaaagtagcaag
aacttccacactcgtcactgtgagctttctggcaccacctttaaactgcacaaggaactg
cagggttctccatgtgagagagaatatcctgtgaaagagctcaagctctatcatggttgc
cggagcaaactgcatccacccacaccatggggacttacactaattcatgacaagcagcag
tggtatctgtgctgtgagaatgaggatgaattgactgaatggaccgccacattttacagc
atccagtataatggtgacatctggccctcctggtga
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