Labeo rohita (rohu): 127165888
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Entry
127165888 CDS
T09007
Symbol
tars1
Name
(RefSeq) threonine--tRNA ligase 1, cytoplasmic
KO
K01868
threonyl-tRNA synthetase [EC:
6.1.1.3
]
Organism
lroh
Labeo rohita (rohu)
Pathway
lroh00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
127165888 (tars1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
lroh01007
]
127165888 (tars1)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
lroh03016
]
127165888 (tars1)
Enzymes [BR:
lroh01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.3 threonine---tRNA ligase
127165888 (tars1)
Amino acid related enzymes [BR:
lroh01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
127165888 (tars1)
Transfer RNA biogenesis [BR:
lroh03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
127165888 (tars1)
Prokaryotic type
127165888 (tars1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2b
HGTP_anticodon
TGS
tRNA_SAD
Motif
Other DBs
NCBI-GeneID:
127165888
NCBI-ProteinID:
XP_050966800
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All DBs
Position
5:complement(19640454..19652054)
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AA seq
718 aa
AA seq
DB search
MADESVTEQMKDLKMDEKKNGKDGGKKKNKNAGGDAGGRAELNPQPQYIDERLSIYNKLK
AEHDGLLAEKAAKESKPIKITLPDGKVVDGESWKTTPYQVACGISQGLADNTVISKVNSE
VWDLDRPLEGDCSIVFLKFDDEEAQAVYWHSSAHIMGEAMERVYGGCLCYGPPIENGFYY
DMFLENEGVSSNDFPCLENLCKKIIKEKQPFERLEVKKETLLEMFKYNKFKCRILNEKVT
TPTTTVYRCGPLIDLCRGPHVRHTGKIKALKIHKNSSTYWEGKADMESLQRIYGISFPDP
KMLKEWEKFQEEAKNRDHRKLGREQDLFFFHDLSPGSCFFLPKGAYIYNTLIEFIRSEYR
KRGFQEVVTPNIYNSKLWQTSGHWQHYSENMFSFEVEKEIFALKPMNCPGHCLMFDHRPR
SWRELPLRMADFGVLHRNELSGALTGLTRVRRFQQDDAHIFCSMDQIESEIKGCLNFLRT
VYDVFGFTFKLNLSTRPEKFLGEPEVWDQAERQLENSLNDFGENWVLNPGDGAFYGPKID
IQIKDAIGRYHQCATIQLDFQLPIRFNLTFVSHDGDDKKRPVIIHRAILGSVERMIAILT
ENYGGKWPLWLSPRQVMVVPVGPTCEEYAQRVQQEFHKVGLMTDVDLDPGSTLNKKIRNA
QLAQYNFILVVGEKEKSSDTVNVRTRDNKVHGERSLKDCMERLKELKASRTRNAEEEF
NT seq
2157 nt
NT seq
+upstream
nt +downstream
nt
atggcggatgagagcgttaccgaacaaatgaaggatttgaaaatggacgagaagaagaat
ggcaaagatggagggaagaagaaaaacaagaatgctggtggagatgcaggtggcagggct
gagttgaatcctcagccacagtacatcgatgagcgtctgtccatttataacaagctgaag
gcagaacatgatggcctgctggctgagaaagcagcaaaagagagcaagcccatcaagatc
acgctgcccgatggaaaagtagtagatggggagtcctggaagaccacaccgtaccaggtt
gcttgtggcatcagccaaggccttgctgataatactgtgatctccaaagtgaacagtgag
gtgtgggatctggacaggcccttagagggagactgcagtatagtgtttctcaaattcgat
gacgaagaagcacaagcagtttattggcactccagtgcccacataatgggagaggccatg
gagcgagtctacggaggatgcctttgttacgggccgcccattgagaatggcttttactat
gacatgtttcttgaaaacgaaggtgtatcgagtaatgatttcccctgtttggagaacttg
tgtaagaagatcatcaaagagaagcagccctttgaaaggctggaggtgaagaaggagact
ctgttggagatgttcaagtacaacaaattcaagtgcaggatcctaaatgaaaaggttacc
accccaacaactacagtttacaggtgtggacctttgatcgatctgtgcagagggcctcat
gtaagacatacaggaaagatcaaggccttgaagatccacaagaattcttctacttactgg
gagggcaaagctgacatggagagcctccaaaggatctatggcatctctttccctgatcct
aagatgctgaaagaatgggagaaatttcaggaagaagccaagaacagggatcatcgcaaa
ctaggaagggagcaagacttgtttttcttccacgacctgagtccgggtagctgtttcttt
ctgcctaaaggagcctacatctataacacgctgattgagtttattaggagtgaatacaga
aagaggggattccaggaagtggtcacaccgaacatctacaacagcaaactatggcaaacc
tcaggacactggcagcattacagcgaaaacatgttctcctttgaggtggagaaggagatc
tttgctctcaagcccatgaactgccctggacactgtctgatgtttgaccaccggccacgc
tcttggagggaactgcctctgcgtatggctgattttggggtcctgcaccgtaacgagttg
tctggagcacttactggcctgaccagagtcagacgtttccaacaagatgacgcgcacatc
ttctgctctatggaccagatcgagtctgagataaagggttgcctgaacttcctgcgtaca
gtgtatgatgtgtttggcttcaccttcaaattgaacctttccaccaggccagagaagttc
ctaggagaacctgaagtgtgggaccaggctgagaggcaactggagaacagcctgaatgat
tttggagagaattgggttctgaatcctggtgatggagctttctatggaccaaagattgat
atccagataaaggatgccatcggcaggtatcaccaatgtgccaccattcagctggacttc
cagttgcccattcgcttcaatcttacatttgtgagccatgatggtgatgacaagaagaga
cccgtgatcatccacagagcaatcctgggttcagtggaacgcatgatcgccatcctgact
gaaaactatggtggaaagtggccactgtggctgtccccacgtcaggtgatggtggttcct
gtaggacccacttgtgaagagtacgcccagagagtacaacaggagttccacaaggtaggg
ttgatgacggatgtggatctggacccaggcagcaccttgaacaagaagatcagaaatgct
cagttggctcagtacaatttcattttagtggtgggagagaaggagaagagcagtgacacg
gtgaacgttaggactcgtgacaacaaggtgcatggagagaggagtctaaaggactgcatg
gagcgactcaaggagctgaaggcctcaagaacccggaacgcagaggaggaattctaa
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