Labeo rohita (rohu): 127165991
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Entry
127165991 CDS
T09007
Symbol
chrne
Name
(RefSeq) acetylcholine receptor subunit epsilon
KO
K04817
nicotinic acetylcholine receptor epsilon
Organism
lroh
Labeo rohita (rohu)
Pathway
lroh04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
127165991 (chrne)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
lroh04040
]
127165991 (chrne)
Ion channels [BR:
lroh04040
]
Ligand-gated channels
Acetylcholine (nicotinic)
127165991 (chrne)
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Gene cluster
GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
Motif
Other DBs
NCBI-GeneID:
127165991
NCBI-ProteinID:
XP_050966996
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Position
5:22742741..22751104
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AA seq
519 aa
AA seq
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MAMADLFGRTCILAFALVATVLQVSANEESQLIADKFKNYNKNIRPARHPNEKVKVQVKL
TLTNLISLNEKDETLTTNVWIEIQWHDYRLAWNTSEYHGISLIRVPYNTVWLPDIVLENN
IDGKFDVAYYANVLISSDGSMYWLPPAIYRSTCAIEITYFPFDWQNCTLVFRSQTYSANE
IDMVLAEDADTGKPIEWVDIDPEAFTENGEWAIKHRPARKLTNPRYSPDDLEYQEVYFNL
IIQRKPLFYIINIILPCSLISSLVVLAFFLPAKAGGQKLTVSISVLLAQTVFLFLIAQKI
PETSLSVPLIGKYLIFVMCMTTLIGTNCIIVLNFSLRSPSTHNMSHTIRHIFLEVVPRFL
GMAPFLDEEEPSSGMYEMRERRRSSFGLMQRAEEYVLKQPRSEMMFDKQRERHGLMRTIV
DEIDVSSTANLYKSLAKTAPEIKECVDACNFIAESTKQQNDIGSEMESWVLIGKMIDKVC
FWAAILLFSVGTVAIFLMGHYNQVPEYPFSWENKKYVPE
NT seq
1560 nt
NT seq
+upstream
nt +downstream
nt
atggccatggccgacctgttcggcaggacgtgtatacttgcgtttgcgctggtggccact
gttttacaagtcagtgcaaatgaggagtcacagttaatcgcagataagtttaagaactac
aataaaaatattcgaccggcaagacaccctaatgaaaaagtgaaggttcaggtcaagtta
accctcaccaacctcatctccttgaatgaaaaagacgagactctaactacaaatgtttgg
attgagattcaatggcacgattaccgccttgcatggaatacatctgagtatcatggcatt
agtctgatccgtgtgccatacaacactgtgtggctaccagatatagtattggaaaacaac
attgatggcaagtttgatgtggcttactacgctaacgtgctgatttcgagcgatggctcc
atgtactggcttccccctgccatctaccgcagtacctgtgctattgagatcacctatttc
cctttcgactggcaaaactgcacactagtcttcaggtctcaaacatacagtgcaaatgaa
attgatatggtattggcagaagatgcagatacaggaaagcctattgagtgggtggacatt
gaccctgaggccttcacagagaacggggagtgggcaataaagcatcggcccgctcgtaag
ctgacaaacccacgttactctcctgatgatctggagtaccaagaggtgtatttcaacctc
atcatccagagaaaaccactcttctatatcatcaacatcatcctgccctgctctctcatc
tcctctctggttgttctggccttttttctacctgcaaaagctggagggcagaagttgacc
gtgtccatttctgtactcttggctcagactgtgtttctcttcctgattgctcaaaagatt
ccagaaacgtcactttctgttcctcttattggcaagtatctaatttttgtcatgtgtatg
actacactgattgggaccaactgcatcattgtcctcaacttctccctccgtagtcctagt
acacacaacatgtcgcacaccatcagacatattttccttgaggtggtccctcgtttcctt
ggcatggccccatttctggatgaggaggagcctagcagtgggatgtatgaaatgagggag
agacggcgcagttcttttggactgatgcagagggctgaggaatatgttttgaaacagcca
cgcagtgagatgatgtttgataaacaaagagagagacatggactcatgcgcacaattgtg
gatgaaattgatgtgagcagtacggcaaacctttacaagagtctggcaaagacagcacca
gaaataaaagagtgtgtggatgcctgtaacttcattgctgaatccactaagcagcaaaat
gacattggatctgagatggagagttgggtgctgattggtaagatgattgacaaggtttgt
ttctgggcagccatcttgctattctctgttggcacagtggccatcttcctcatgggtcac
tacaaccaggtacctgagtacccattttcttgggagaacaaaaagtatgtacctgagtag
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