Labeo rohita (rohu): 127165992
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Entry
127165992 CDS
T09007
Symbol
top3b
Name
(RefSeq) DNA topoisomerase 3-beta-1
KO
K03165
DNA topoisomerase III [EC:
5.6.2.1
]
Organism
lroh
Labeo rohita (rohu)
Pathway
lroh03440
Homologous recombination
lroh03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
127165992 (top3b)
03460 Fanconi anemia pathway
127165992 (top3b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lroh03032
]
127165992 (top3b)
03400 DNA repair and recombination proteins [BR:
lroh03400
]
127165992 (top3b)
Enzymes [BR:
lroh01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
127165992 (top3b)
DNA replication proteins [BR:
lroh03032
]
Eukaryotic type
DNA Topoisomerases
127165992 (top3b)
DNA repair and recombination proteins [BR:
lroh03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Bloom's syndrome complex (BTR)
127165992 (top3b)
FA (Fanconi anemia) pathway
127165992 (top3b)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_TOP3B
Toprim
Fer4_11
Motif
Other DBs
NCBI-GeneID:
127165992
NCBI-ProteinID:
XP_050966997
LinkDB
All DBs
Position
5:39374558..39394011
Genome browser
AA seq
861 aa
AA seq
DB search
MRTVFMVAEKPSLAQSIAKILSKGSCSTRKGLNGACSVHEYTGSFMGQNVRFKMTSVCGH
VMSLDFIGKYNNWDKVDPAELFSKAPTEKKEANPKLNMVKFLQVEAKGCDYVVLWLDCDK
EGENICFEVLDAIQPLMNKSFGSDRTVYRAKFSSITDTDICNAMNRLGEPNKNEALSVDA
RQELDLRIGCAFTRFQTKYFQGKYGNLDSSLISFGPCQTPTLGFCVERHDKIQSFKPEAY
WVVQAKVFRGKDSPLILDWDRVRVFDRDVGQMFVNMAKTAKEAKVDSVSKKEKAKQRPLA
LNTVEMLRVASSALGMGPQHTMQIAERLYTQGYISYPRTETTHYPENFDLKGTLKQQANS
SFWGETVKALLSEGINRPRKGVDAGDHPPITPMRAASESELGSDGWRLYDYITRHFIATV
SPDCKYLQTTISFSIATESFTCSGKTLISAGYTEVMPWQGIPQEEALPVCERGDTFTVDE
IKLLEKQTNPPDYLTEAELITLMEKHGIGTDASIPVHINNICQRNYVTVESGRKLKPTNL
GIVLVHGYYKIDADLVLPTIRSAVEKQLNLIALGKANFHQVLQHTLDIFKRKFHYFVDFI
AGMDELMEVSFSPIAATGKPLSRCGKCHRFMKYIQAKPSRLHCSHCDETYSLPQNGAIKL
YKELKCPLDEFELVLWTSGSRGKSYPVCPYCFSNPPFRDMKKGMGCNECTHPSCQHSLNS
LGIGQCVECETGVLVFDPTSGPKWRMACNKCNVVVHFFEHAHKVQVSQDSCDSCEASLVI
VDFNKTRSPLPDGETQHTGCVFCDPAFQDLVELKHATMRHPMHRAGGARRGRGKGRGRRP
MGRGNPKKPKDKMAALAAYFV
NT seq
2586 nt
NT seq
+upstream
nt +downstream
nt
atgaggactgtgtttatggtggctgagaagccctctctggctcagtccatcgccaaaatc
ctctctaagggtagctgttcgacccgaaaaggcctgaatggagcatgttcagtccatgag
tacacaggaagcttcatgggccaaaatgtgaggttcaagatgacgtcagtgtgtggacat
gtcatgagtctggactttatcggaaagtataacaactgggataaagttgatccagctgag
ttgttcagtaaagctccaactgagaagaaagaagcaaaccccaaactaaatatggtcaaa
ttccttcaggttgaagcgaaaggttgtgactatgtcgtcctgtggttggactgtgacaag
gaaggagagaacatttgttttgaggtgttggatgccatccagcctctaatgaataagtct
ttcggtagtgatcgtaccgtgtatcgcgccaagttcagctccatcacagacacagatatc
tgtaacgccatgaaccgactcggagaacccaacaagaatgaggctctgtctgtagatgct
cgtcaggaactggacctcagaatcggctgtgctttcacacgtttccagaccaaatacttc
caagggaaatatgggaatttagactcttctttgatctcgtttggtccctgtcagactccc
acactgggtttctgtgtggaacggcatgacaagatccagtccttcaaacctgaagcgtac
tgggtcgtacaggcaaaggtttttagaggcaaggacagtccactcatcttggactgggac
cgtgtgcgagtttttgaccgagatgttggtcaaatgtttgttaacatggcaaaaactgct
aaggaggctaaagttgactctgtgtctaagaaagaaaaagccaagcagagacctctcgca
ttgaatacagtggagatgttaagagtggccagctctgcgttgggaatgggtccccagcat
actatgcagatagcagagcgtctctacacacagggttatatcagttaccctcgaacagag
acgacacattatcctgaaaactttgacctgaagggcaccctcaaacaacaggccaacagc
tccttctggggagaaacggtaaaagccctgctctctgagggcattaacaggccaaggaaa
ggagtggatgcaggggaccatccaccaatcacacccatgagagccgcctctgaaagcgag
ctaggcagcgatggctggcgtttgtatgattacatcacaagacacttcattgccacggtc
agccccgactgtaaatacctgcagaccacaatttcctttagcatcgccacagaaagcttc
acatgcagcgggaagacgctcatctctgctggatacactgaggtgatgccctggcagggt
attccacaggaagaggccttgccggtgtgtgagagaggagacacattcacagtggatgag
atcaaactactggagaaacagaccaatccaccagactacctgactgaggccgagctcatc
acactcatggagaaacacggcatcggtacggatgccagcatccccgtccacattaacaac
atctgccaaaggaactatgtgacggtagaaagtggccgcaaacttaaacccaccaacttg
gggattgttctggtacacggttactataaaattgatgcagatttggtgctgcccaccatc
cgcagtgctgtggaaaaacagctgaatctgatagctttaggaaaggcaaacttccaccag
gtcttacagcacactctagatatcttcaagaggaagttccactactttgtggacttcatt
gcaggcatggatgagctgatggaggtgtccttttctcccatcgccgctactgggaaacct
ctctcgcgctgtggcaaatgccatcgcttcatgaagtatatccaggccaaacctagtcgt
ctgcactgctctcattgcgatgaaacctacagtttgcctcagaatggagccattaagctg
tacaaagagctcaagtgtcccctggatgagtttgagctggtgttgtggacctcgggttct
cgtggcaaaagctaccctgtgtgtccatactgcttcagcaaccctcccttcagagacatg
aagaaagggatgggctgtaatgagtgcacacacccttcctgtcagcactccctcaactct
cttggcatcggtcagtgcgttgaatgtgagacgggcgtcttggtcttcgatcccacctct
ggtccgaagtggcgtatggcttgcaacaaatgcaacgtggtggtgcatttcttcgagcac
gcccataaagtgcaggtgtcccaggacagctgtgattcctgcgaggcctccctggtcata
gtggacttcaacaagacacgctcaccattgcctgacggtgaaacgcagcacaccggatgc
gtgttttgtgaccctgcgttccaggatctggtcgagctgaaacacgcgaccatgcggcat
cccatgcaccgggccgggggagcccgcagagggagagggaagggacgagggaggaggccc
atggggagagggaatcctaaaaagcctaaagataaaatggcagccctggcagcgtatttt
gtatag
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