KEGG   Labeo rohita (rohu): 127166250
Entry
127166250         CDS       T09007                                 
Symbol
kdm4aa
Name
(RefSeq) lysine-specific demethylase 4A isoform X1
  KO
K06709  [histone H3]-trimethyl-L-lysine9/36 demethylase [EC:1.14.11.66 1.14.11.69]
Organism
lroh  Labeo rohita (rohu)
Brite
KEGG Orthology (KO) [BR:lroh00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:lroh03036]
    127166250 (kdm4aa)
Enzymes [BR:lroh01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.66  [histone H3]-trimethyl-L-lysine9 demethylase
     127166250 (kdm4aa)
    1.14.11.69  [histone H3]-trimethyl-L-lysine36 demethylase
     127166250 (kdm4aa)
Chromosome and associated proteins [BR:lroh03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    127166250 (kdm4aa)
SSDB
Motif
Pfam: JmjC Tudor_2 zf-HC5HC2H_2 PHD_2 JmjN zf-HC5HC2H PHD Tudor_5 DUF4537 PHD_4
Other DBs
NCBI-GeneID: 127166250
NCBI-ProteinID: XP_050967318
LinkDB
Position
6:3105466..3129203
AA seq 1767 aa
MASDSVSQSSQSPVTKIMTFHPTKEEFKDFNRYIAYMESQGAHRAGMAKVVPPKDWKPRR
TYDDIDDLVIPAPIQQVVTGQSGLFTQYNIQKKPMTVREFRKTANTDKFCNPRYADFDEL
ERKYWKNLTFNPPLYGADISGTLYDSDVTEWNIGHLNTILDTVERESGITIKGVNTPYLY
FGMWKSTFAWHTEDMDLYSINYLHFGEPKSWYIVPPEHGKRLERLARGFFPGSAQSCEAF
LRHKMTLISPSILRKYGIPFEKVTQEAGQFIVTFPYGYHAGFNHGFNCAESTNFATQRWI
DYGKLATLCSCRKDMVKISMDLFVRKFQPERYKLWKAGKDNAPIDHSKLPPEAAEFLTDG
KTENETGELSDSSKAETEKKRGETETGEEQKANKDGGEEGKTETLKSETDGAKEKGGLEV
EGKKPVSDEEPSSTSEQINSSSPKQNVAQKRLRPSSDNEAKKDNQVKVEQEEEVEKKKAK
LSQTETDNKNEQSISTDPGDVQAEETMETDTPPPQQQENQAPPCMEVELLASNPTSSSDI
TTQQRDDVTPFEPSDVTSSSQSTNSIADEAPNSDIASQSEHVTQSCDVQSKPDDITPNGD
LTDAQQSDIPVISVTSSISSVHGINSTHTCDVFAEPSDSTINTIIPSPGEPGINSSHPHD
VQPEPSDITVSPNQEPGINSTHSCDPQPKLSNISISPKHEPNVSPTHSCDVITEPTDITA
SPEHEPSISSAPSCDAQPEPTDITVNAEHEPSISSAHSCDAQPEPTDITVNAEHEPTISS
AHSCDAQPEPTDITVNAEHEPSISSAHSLDIQLEPSNNTISADHEPSISSAHSCDVQLEP
SDSTASAENESSINSAHSCDVQPAPSDITISSEHEPSISSAHSCDAEPEPTDITVSDENK
PSISSAHSCDVKLDSSNNIINTEHEPSLSSAHSCDAQVEPTDITVSAENEPSISSAHNCD
VQPEPTDITVSIEHEPSISSAHSCDVNLEPSDNIINTENEPSISSGHSLDVQSEPIDNTI
SAEHELSFSSAHTFDAQPEHTDVTIRAEHEPSINSALTGDIQPELGNITLDTKYEPSVNS
AHTCDVTHEFSDITISPKHEHGINSALTGDIQPELGNITISPKHEYAVNSTHACDVTAEP
SSITVNPEPEPNINSAYICDVQPELTNITISLEHKPTINSAHTYDVITTPSNITVGPKHE
PSVYSAHTYDAIIEPSGSAINLKVSESRYRSASAGGTQVCPPAVQHIFQRTLSPAEVLHV
HSYAKGDYSDLEPRIRHERDRDSDSDSESQEDSKKEVEHPVEAQHRLPRLPRHHPLMKDS
ISDEELQDQAASEEDGLDGEAWARPLAQLWQNRPYNPEREREYNREMGLRPPYCAVCALF
QAHQRSEGGESEPAVVLPGGQMRTKPLIPERCFTTTTEDSADAQPSTPHLEEDGTSLLIS
CSLCSVRVHTSCYGVAPAKVSKDWKCARCKANALTESCCLCSLRGGALHRANNGKWVHVL
CAVAVLEARFVNIAERSPVDLSGIPLQRFKLKCYYCKRRMKKTLGCCVQCSHGRCPTSYH
PTCAQAAGVIMHPDDWPFVVYVTCCRHKGPVQSERNKAAMRELSVGQKVICKHKNGRYYQ
CEVIQLTKETFYEVNFDDGSFSDNLFPEDIVNRDCAQLGPPPQGEVVQVRWTDGLVYGAK
FVAAHVIQMYQVEFEDGSQLTAKRDDVYTLDEELPKRVKSRLSKASDMRFDGMFGEKKVQ
ESKRQRVINSRYRGDYIEPVIYRAIME
NT seq 5304 nt   +upstreamnt  +downstreamnt
atggcttcagactcggtctctcaaagctcccagagtcctgtcaccaagatcatgaccttt
catcccacaaaagaggagttcaaagacttcaacagatacattgcatatatggagtcgcag
ggagctcacagagccgggatggctaaggtggtgccaccaaaggactggaagcctcggcgc
acatatgacgacattgatgacctggtgattcccgcccctattcagcaggtggtcactggc
caatcaggtctcttcactcagtacaacatccagaagaagccaatgaccgtccgcgagttc
cgcaaaactgccaacacagacaagttctgtaatcccagatatgctgattttgatgaacta
gagaggaaatactggaagaatttaacattcaatcctccactatatggggcagatatcagt
ggaaccctctacgattctgatgtgacggagtggaatatcggccatctgaacactattttg
gacacggtggaaagagagagcggaatcacaatcaaaggagtaaacactccatatctttat
tttgggatgtggaaaagcacgttcgcctggcacacagaggacatggatctctacagcatc
aactaccttcactttggagaacccaagtcctggtacattgtgcctccagaacatgggaaa
cgactggagcgtcttgctagaggattttttcctggaagtgcccaaagctgcgaagccttc
ctgcgacacaaaatgactttaatttcaccgtcaattctgaggaagtatggaatacccttt
gagaaggtcacacaggaagcaggccagttcattgtgaccttcccgtatggatatcatgct
ggttttaaccatggtttcaactgtgcagaatccaccaacttcgccacccagcgctggatc
gattatggaaagctggcaacattatgttcctgccggaaggatatggtgaagatatccatg
gatctgtttgttcgcaagttccagccagaacgctataagctttggaaagcaggaaaagac
aatgcgcccattgaccactcaaagctcccgccagaggcggcagagtttctgacagatgga
aaaacagagaatgagacaggagagctcagtgatagcagcaaagcagaaacagagaagaaa
agaggagaaacggagactggagaggagcagaaagcaaacaaggatggtggagaggagggc
aaaaccgaaacgttgaaaagtgaaacagatggtgcaaaggagaaaggaggtctggaggta
gagggaaagaagcccgttagtgatgaagaaccaagcagcacttcagagcagatcaacagt
agcagtccaaagcagaatgtggcgcagaagcggctcagacccagcagtgacaatgaagca
aaaaaagacaatcaagtgaaggtagaacaagaggaggaagtcgagaagaagaaagccaaa
ctcagccagactgagacagacaacaagaatgaacaatccatctccactgacccaggtgat
gtgcaagctgaggagacgatggagacagacacgccccctccacagcagcaagagaatcaa
gcccctccctgtatggaggtggagctcttggcatcaaaccccacctccagcagtgacatt
acaacgcagcaaagagatgacgtcactccctttgaacccagcgacgtcacctcatcctca
caatccacaaacagcattgctgatgaggctccaaacagtgatattgcctctcagtccgaa
cacgtcactcagagctgtgatgtccaaagcaagcctgatgacatcactccaaacggtgac
ctcactgatgcccagcagagtgacatccctgtcatatctgtaaccagcagtatctcctct
gtccacggcattaactccacccacacctgtgatgtctttgcagaacccagtgacagcact
ataaataccatcatccctagtccaggtgagcctggcattaactcctcccacccccatgat
gtccaaccagaacccagcgacatcacggtcagcccaaaccaagagcccggcattaactcc
acccacagctgtgatccccaaccaaagctcagcaacatctccatcagccccaaacatgaa
cccaatgttagccccacccacagctgtgatgtcatcacagaacccactgacatcaccgcc
agccctgaacacgaacccagcataagctccgcccccagctgtgatgcccaaccagaaccc
actgacatcactgtcaacgctgaacatgaacccagcataagctccgcccacagctgtgat
gcccaaccagagcccactgacatcactgtcaacgctgaacacgaacccaccataagctcc
gcccacagctgtgatgcccaaccagaacccactgacatcactgtcaacgctgaacatgaa
cccagcataagctctgcccacagccttgatatccaattagaacccagcaacaataccatc
agcgctgaccatgagcccagcataagctccgcccacagctgtgatgtccaactagaaccc
agcgacagcactgccagtgctgaaaacgaatccagcattaactccgcccacagctgtgat
gtccaaccagcacccagcgacataaccatcagctctgaacacgaacccagcataagctct
gcccacagctgtgatgctgaaccagaacccaccgacatcactgtgagtgatgaaaacaaa
cccagcattagctccgcccacagctgtgatgtcaaactagattccagcaacaacatcatc
aacactgaacatgaaccaagcttaagctccgcccacagctgtgatgcccaagttgaaccc
accgacatcaccgtcagcgctgaaaacgaacccagcattagctccgcccacaactgtgat
gtccaaccagaacccaccgacatcactgtcagcattgaacatgaacccagcataagctcc
gcccacagctgtgatgtcaacttagaacccagcgacaacattatcaacactgaaaatgaa
cccagcattagctccggccatagccttgatgtccaatcagagcccattgacaacaccatc
agcgctgaacacgaactgagctttagctccgcccacacctttgatgcccaaccagaacac
accgacgtcactatcagggctgaacacgaacccagcattaactccgccctcaccggtgat
atccaaccagaactcggcaacatcaccctcgacactaaatacgaacccagtgttaactcc
gcccacacctgcgatgtcacccatgaattcagtgacatcaccatcagccctaaacacgag
cacggcattaactccgccctcaccggtgatatccaaccagaactcggcaacatcaccatc
agccctaaacatgaatatgccgttaactccacccacgcctgtgatgtcaccgcagaaccc
agcagcatcaccgtcaaccctgaacccgaacccaacattaactccgcctacatctgtgat
gtccaaccagaactcaccaacatcaccatcagccttgaacacaagcccaccattaactct
gcccacacatatgatgtcatcactacacctagcaacatcaccgttggccctaaacacgaa
cctagcgtttactccgcccacacgtatgatgccatcattgaacccagcggcagcgccatc
aaccttaaggtcagcgaatcacggtatcgctctgcgtcagcgggcggcactcaggtgtgt
ccgcctgcagtccagcacatcttccagagaacgctgagccccgcggaggtgctgcacgtc
cacagctacgctaaaggagattacagcgatctcgagccacgcatccggcatgaaagagac
agagacagcgactctgacagcgagtctcaagaggacagcaagaaagaagtcgaacatcca
gtggaagctcagcacagacttcccagactccccaggcaccatcctctgatgaaggacagc
atcagtgacgaagagctgcaggatcaggctgcgtcagaggaggacgggctggacggagag
gcctgggcgcgacctttggcccagctgtggcagaacagaccgtataatccagaaagagag
agagaatacaacagagagatgggcctgcggcctccgtactgcgctgtgtgcgcgctcttc
caggcacatcagcggtctgaagggggcgagagcgagccggccgtggtactgcctgggggt
cagatgaggaccaagcctctgattccagaaagatgtttcaccaccaccacagaggacagc
gcagatgctcagccgtccactccgcacctggaggaagacggcaccagtctgctcatcagc
tgctccctgtgcagtgtccgtgtgcacactagttgttacggtgtggctccagcaaaagtt
tccaaagactggaaatgtgcccgctgtaaagccaacgccctcactgagagttgctgtctg
tgttcattaagaggcggagcgttgcacagagccaataatggcaaatgggttcacgtcctg
tgtgcggtggcagtgctggaagctcgctttgtgaacatcgctgagcgatcacctgtggat
ctgagcggcattcccttacagagattcaagctaaaatgctactactgcaaacggcggatg
aagaaaacgttgggctgttgtgtgcagtgctctcatggtcgctgcccgacctcatatcac
ccgacctgcgcacaggccgccggtgtcatcatgcacccggacgactggcccttcgtcgtc
tacgtcacctgttgccgccacaaagggccggtacaatctgagcgtaataaagcagccatg
agagagctcagcgtgggtcagaaggtcatctgcaagcacaaaaacggacgttactaccag
tgtgaagtcatacagctgacaaaagagacattttatgaggtcaactttgacgatggctcc
ttcagcgataaccttttcccagaggacattgtgaaccgagactgtgctcagctgggtccg
ccaccgcagggtgaagtggttcaggtcagatggacagacggtcttgtctatggagccaaa
ttcgtagcagctcacgtcattcagatgtaccaggtggagtttgaggatggatcacagctg
actgctaagagagatgacgtctacaccctagatgaagagctgcccaagagagttaaatct
cgtctgtctaaggcatcagacatgcgttttgatggcatgtttggagagaagaaggtccag
gagagcaagagacagagagtgatcaactccaggtacagaggcgactatatcgagcccgtc
atctaccgagccatcatggagtag

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