Labeo rohita (rohu): 127166264
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Entry
127166264 CDS
T09007
Symbol
nelfcd
Name
(RefSeq) negative elongation factor C/D
KO
K15181
negative elongation factor C/D
Organism
lroh
Labeo rohita (rohu)
Pathway
lroh03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
127166264 (nelfcd)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lroh03021
]
127166264 (nelfcd)
Transcription machinery [BR:
lroh03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
NELF complex
127166264 (nelfcd)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TH1
DUF4817
Motif
Other DBs
NCBI-GeneID:
127166264
NCBI-ProteinID:
XP_050967342
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Position
6:complement(30386690..30395013)
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AA seq
608 aa
AA seq
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MTYYTRAVRCSHTYFVNSRFSGLKKSFFLMDEEYYGNAGEWEAQDGNMEDGYADAEADGK
VQEECLQKFSSRDYIMEPTVFNTLKTYFQAGGSPEHVIQLLSENYSAVAQTVNLLAEWLI
QMGVEPAQVQERVENHLKSLLIKHFDPQKADSIFTVEGETPAWLEQMIAHTTWRDLFYKL
AEAHPDCLMLNFTVKLISDAGYQGEITSVSTACQQLEVFSRVLRTSLATLLDGGEQNLEK
NLPEFAKMVCHGEHTYLFAQAMMSILAQEEQGGSAMRRIGQEVQKYAHERGHDASQITLA
LGTAAAYPRACQALGAMLSKGALNPADITVLFKMFSSMDPPPVELIRVPAFLDLFMQSLF
KPGAKINQDHKHKYIHILAYAASVVETWKKNKRVNINKDELKSTSKAIETVHNLCCNENK
GATELVAELSTLYQCIRFPVVAMGVLKWVDWTVSEPRYFQLQTDHTPVHLALLDEISTCH
QLLHPQVLQLLIKLFETEHSQLDVMEQLELKKTLLDRMVHLLSRGYVLPVVGYIRKCLEK
LNTDISLIRYFVTEVLDVITPPYTSDFVQLFLPILENDSIAGTIRTEGEHDPVAEFIAHC
KSNFIMMN
NT seq
1827 nt
NT seq
+upstream
nt +downstream
nt
atgacgtattatacgcgcgccgttcggtgttcacatacgtattttgtaaacagtcgcttc
tctggattaaagaaatcatttttcttaatggacgaagaatactacggcaatgctggagaa
tgggaggcacaagacggcaacatggaggatggatacgcggatgctgaagctgatggaaaa
gttcaggaggagtgtctgcagaaattttccagcagagactatatcatggagcccaccgtg
tttaacaccctgaaaacgtatttccaggcaggaggttcacctgagcatgtcatccagttg
ctctcagagaactactccgctgtcgcacagacggtcaatctactggcggaatggctcatt
cagatgggtgtggagcccgctcaggtgcaggagcgtgtggagaatcatttaaagagtctc
ttgattaaacactttgaccctcagaaagcagattctattttcactgttgagggagagaca
ccagcatggctggagcagatgatagcacacacaacatggagagatctgttctacaaactg
gctgaggctcatccagactgcctgatgctcaacttcactgttaagttgatttcagatgca
ggataccaaggagagatcacaagcgtgtccacagcctgtcaacagttggaggttttctcc
agagtcctgcgaacctctctcgccacgctgctggatggaggagaacagaacctggagaaa
aatctcccagagtttgccaagatggtgtgtcacggtgagcacacgtacttgttcgcccag
gccatgatgtccatcctcgctcaggaggagcagggcggctcagcaatgcggcgaattgga
caggaagtacagaaatacgcccacgagaggggacatgatgccagtcagatcacattagcg
ctgggcacagctgctgcatatccgcgcgcatgccaggctcttggtgctatgctgtccaaa
ggggctctgaacccagcagacatcacagtcctttttaagatgttcagtagcatggatcca
cctcctgtagagctgatccgagttcctgcctttttggatctgttcatgcagtcgctattt
aaacccggagctaaaatcaaccaggaccacaagcacaaatacatccacatcttagcgtat
gctgctagtgttgtggaaacatggaaaaagaacaagcgtgtgaatataaataaggatgag
ctgaagtcaacctcaaaggccattgagacggttcataatctctgctgcaatgaaaacaag
ggagctactgaactagtagcagaactcagcacattataccagtgcataaggtttccagtg
gtagcgatgggagtgctgaagtgggtcgactggacggtgtctgagcctcgttacttccag
ctacagacggaccacactcctgtccatctagcgcttctggatgagatcagcacatgccat
cagcttctccatccgcaggtgttacagttgcttatcaaactgttcgagacagagcactcg
cagctcgatgtcatggagcagctggagctcaagaagaccttactggaccgtatggttcat
ctactgagtcgaggttatgttcttccagtggtcggctatatccgcaaatgtcttgagaag
ctcaacacagatatttcactcatcagatactttgttacagaggttctagatgtgataaca
cctccgtatacctcagacttcgtccagctgtttttgcccattttagaaaacgacagcata
gcaggaacaatccgtactgagggagaacatgatcctgtagccgagttcattgctcactgc
aaatccaacttcattatgatgaactaa
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