Labeo rohita (rohu): 127166359
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Entry
127166359 CDS
T09007
Symbol
dnajc6
Name
(RefSeq) putative tyrosine-protein phosphatase auxilin isoform X1
KO
K09526
DnaJ homolog subfamily C member 6
Organism
lroh
Labeo rohita (rohu)
Pathway
lroh04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
127166359 (dnajc6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
lroh03041
]
127166359 (dnajc6)
03110 Chaperones and folding catalysts [BR:
lroh03110
]
127166359 (dnajc6)
04131 Membrane trafficking [BR:
lroh04131
]
127166359 (dnajc6)
Spliceosome [BR:
lroh03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
127166359 (dnajc6)
Chaperones and folding catalysts [BR:
lroh03110
]
Heat shock proteins
HSP40 / DNAJ
127166359 (dnajc6)
Membrane trafficking [BR:
lroh04131
]
Endocytosis
Clathrin-mediated endocytosis
Other core components
127166359 (dnajc6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PTEN_C2
DnaJ
Y_phosphatase
Motif
Other DBs
NCBI-GeneID:
127166359
NCBI-ProteinID:
XP_050967513
LinkDB
All DBs
Position
6:complement(19783596..19828039)
Genome browser
AA seq
977 aa
AA seq
DB search
MSLLGGYKKKSSYDGYESLQLVDSSGDFCTGGRSGGGGGGGGGGLTAVTLGSVKTGPARQ
DDYSTMDSSGPPSPDMDGNYGGGLLDMVKGGAGKFFSNIKDNLKDTIKDTSTKVMNQVAT
YTKGELDIAYITSRIIVMSYPAEAVEMGYRNHTEDIRSFLDSRHADHYTVFNLSQRNYRG
AKFSNRVSECNWPSRQAPSLHNLFAVCKNMYNWLKQNPKNVCVITCSDGRAPSGVLVCAM
FCFCHLFANPVPAMQLLSAKRPGSGLWPSHRRYIGYVCSLVSEKPTIPHSKPLVIKSVTM
SPVPCFNKQRSGCRPFCDVLIGETKIFSTAQEYERMREHRVQEGKVVFPVSVSAQGDVVI
SVYHMRSHALQAKVTNTQIFQIQFHTGFIAPGTTVLKFLKTELDACDSPEKYPQLFHVLL
DIEVESTEKQKDLTPPWEQFPTKDLNPNVLFSCHQEHQDALAIADPAQGHGSCGGRVGPN
EESEPSDDEMLSLSSQQSNASNEKSKAAKKPEPQSTAAPPPAAEEVDLLGLDGDAAKLPP
SSPQPPTTSTTTDLLGDLFGAPPTPQPASGPTSAQSTPRRSATSSSPCPSPRSGDTFDPF
GSGPAPAPKPQDFMGAFLGPGNMGQPDPFLHAARSPSPTMQNMGMGRSSPVPPTTPTVNI
QQQSTTGAWEWNKPAPAGGGFGMGSKSASTSPTSSVHGTPTHQAKPNTLDPFADLGNLGA
GLGGGGSGFSSKPTTPTGTGGAFPPMGSPQRPAPSPQHTASGGWHPGTGFPSWQPGGGAQ
WQPQAQGPQHQTPPKAPGPSMPHTSPQNRPNYNVSFSSMGGASPGATGAKAQPNMGTRPK
VSDANFDDLLSGQGFAGTKEKKGPKTIAEMRKEEMAKEMDPEKLKILDWIEGKERNIRAL
LSTMHTVLWEGETRWKPVGMADLVTPEQVKKVYRKAVLVVHPDKATGQPYEQYAKMIFME
LNDAWSEFESQGQKALY
NT seq
2934 nt
NT seq
+upstream
nt +downstream
nt
atgagcctgctaggtggctacaagaaaaagagcagttacgatggctacgaatctttgcag
ctggtcgatagcagcggagacttctgcaccgggggacgaagcggcggtggcggcggcggc
ggcggcggcggtttgacggcagtgaccctcggcagcgttaaaacaggccccgctcgacag
gacgactacagcaccatggacagctcaggccctccatctccagatatggatggaaactat
ggagggggacttctggatatggttaaaggaggtgctggaaagttcttcagcaacatcaaa
gacaacctcaaagataccatcaaagacacctctaccaaggttatgaaccaagtggccacg
tatacaaaaggagagttggacattgcctacatcacctctcgtattatcgtgatgtcatat
cctgctgaggcggtggagatgggctacaggaaccacacagaggatatccgttcttttctg
gactcgcggcatgccgaccactatactgttttcaacctgtcacagaggaactatcgaggg
gccaagttctccaacagagtttctgaatgcaattggccttccaggcaggccccgagtctt
cacaacctatttgctgtgtgtaagaatatgtacaactggctcaagcaaaaccccaagaat
gtgtgtgtgatcacctgttcggatggcagagctccttcaggcgtgctggtttgtgccatg
ttctgtttctgccaccttttcgccaacccggtgccagccatgcagcttctcagcgccaag
aggcctggatctggcctgtggccctcccataggaggtacataggttatgtatgcagttta
gtctcagagaagccaaccataccacactccaaaccgctagtcattaaatccgtcacaatg
agtcctgttccttgcttcaacaaacagcgcagtggctgtcggccattttgtgacgtactt
attggcgagaccaagatattttctacagctcaggagtatgagagaatgagggaacacagg
gttcaagagggcaaagtagtgtttcctgtgagtgtgagtgcccaaggagatgtggtgatt
tcggtctatcacatgcgttctcatgcacttcaggccaaggtaacaaatacccagatattc
cagattcagttccatactggtttcatcgcccctggcaccacagtcttaaagtttctaaag
acagagctggatgcctgtgattctccagagaaatacccgcagctgtttcatgtgctgtta
gacattgaggttgaaagtacagagaaacaaaaagatctcaccccaccgtgggagcagttc
cccaccaaagacctgaaccccaacgtgcttttctcctgtcatcaggaacaccaggatgca
cttgctattgcagatcctgcccagggccatgggagttgcggaggcagagtgggcccgaat
gaagagagcgaaccgtcagatgatgaaatgctctcgctttctagtcagcagagcaacgcg
agcaatgagaaatcaaaagcagctaaaaaaccagagccccagtctacagcggcccctcct
ccagcagctgaggaagtagatctgctgggactggatggtgatgcagcgaagcttcctcca
tcctccccacaacctccgaccaccagcaccaccacagacctgctgggggacctgtttgga
gctccaccgacaccacagccggccagcggcccaacttctgctcagtccacaccacgaaga
tccgcaacctcctcttcgccctgtccatcacctcgatctggagacacttttgacccattt
gggtctgggcccgctcccgcccctaagccgcaggacttcatgggggctttcctgggtcca
ggtaatatggggcagccagaccccttcctgcatgctgcacgatctccgtctcctacaatg
cagaacatgggcatgggtcgcagttcacctgtgccgcccactactcccactgtcaacatc
cagcagcaaagcactacaggagcatgggaatggaacaaaccagcacctgcaggtggaggt
tttggtatgggaagtaagtctgccagcactagcccaaccagctcagttcacggtactccc
acccaccaggccaaacccaacactttggacccgtttgctgatctgggtaacctcggagcc
ggtctgggaggaggtggttcgggattctccagcaagcccaccacacctactggcaccggg
ggagcatttccgcccatgggctccccgcagcgtcccgctccctctccccagcacactgcc
tctggaggctggcatcctggcacaggcttcccctcatggcagccaggaggtggggctcag
tggcagccacaggcccagggtccacagcaccagaccccacctaaagcaccaggaccctcg
atgcctcacacttcaccacagaacagacccaactacaatgtcagcttctccagcatgggt
ggagcttcgccaggagccacaggggcaaaagcacagcctaacatgggaaccagaccaaag
gtttcagacgctaattttgatgacctgctctcaggccagggctttgctggcactaaagag
aagaaagggccaaaaaccatagcagaaatgagaaaagaggagatggcaaaagaaatggac
ccagagaaactcaagatcctggactggattgaggggaaggagaggaacatcagagcattg
ctatccaccatgcacacggtgctttgggagggagaaacacgctggaaacctgtaggcatg
gctgaccttgtcacaccagagcaggtgaagaaggtttaccgcaaagctgtgctggtagtg
caccctgacaaggctaccggacagccctacgaacaatatgccaagatgatttttatggaa
cttaatgatgcgtggtcagaattcgaaagccaaggacagaaagcactgtactaa
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