Labeo rohita (rohu): 127166428
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Entry
127166428 CDS
T09007
Symbol
cfap52
Name
(RefSeq) cilia- and flagella-associated protein 52
KO
K24728
cilia- and flagella-associated protein 52
Organism
lroh
Labeo rohita (rohu)
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
lroh03037
]
127166428 (cfap52)
Cilium and associated proteins [BR:
lroh03037
]
Motile cilia and associated proteins
Other motile cilia associated proteins
127166428 (cfap52)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_WDHD1_1st
WD40_Prp19
Beta-prop_EML
WD40_CDC20-Fz
Beta-prop_EML_2
WDR55
WD40_MABP1-WDR62_1st
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
EIF3I
Beta-prop_TEP1_2nd
WDR90_beta-prop_4th
Beta-prop_CAF1B_HIR1
Beta-prop_IFT140_1st
WD40_like
Beta-prop_IFT122_1st
ANAPC4_WD40
Beta-prop_HPS5
Beta-prop_WDR75_1st
NBCH_WD40
Beta-prop_RIG_2nd
Beta-prop_Vps41
Beta-prop_NWD2_C
Beta-prop_SPT8
Beta-prop_NUP159_NUP214
Beta-prop_VPS8
Beta-prop_DCAF4
Beta-prop_SCAP
PEP5_VPS11_N
KNTC1_N
Beta-prop_RIG_1st
Beta-prop_WDR35_TULP_N
WDR54
Motif
Other DBs
NCBI-GeneID:
127166428
NCBI-ProteinID:
XP_050967638
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All DBs
Position
6:complement(14655539..14665536)
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AA seq
617 aa
AA seq
DB search
MAEDTQEVPQLALVAVIGFNGHVFSGLKVHPDKEHLIYPLGCTVIIKSLKSGRQTFLHGH
TNNVSCISVSKSGRYIASGQVTFMGFKADVIIWDYEKKEIYARLMLHKARVEDLSFSPND
KYLVSLGGQDDGSIVVWNIESKEAICGSPASAQSAGHCLTIEYTNLNDEIFVSAGNGTLR
VWELDLPNRKIRPTECQTGQLKRIVKCLEIPDDDNYFYCGTTSGDILKVNLKTRLLNSCG
PVKQKFSKGVNTLKVLKTGDILVGSGDGMLSLCSGGNFKTIKSVQLEGGVTSVTLRGDGQ
QFYVGTEAAQIYNLGYTDFKPELIATNHNSAVKDVAFPFATSELFATCSQNDIRVWHTET
SKELLRITVPNITCNALGFVQDGRSIFSAWNDGKIRVFTPESGKLRLIIHNAHSMGVTAI
AATNDCKRIVSGGGEGQVRVWEIFQNSYRLIETMKEHKATVNCIKIKSNDKECVTASSDG
ACIIWDLVRFVRNQMVLSNTLFSVVCYHPEEFQIITSGTDRKIGYWEVYDGSAIRELEGS
LSGAINGMHISEDGKYFVTGGDDKLLKLWHYSDGEVTHVGIGHSGSITNVRICPNSRYIV
STSADGAILRWRYPQTS
NT seq
1854 nt
NT seq
+upstream
nt +downstream
nt
atggcagaagacacgcaagaagtccctcaactcgcattagtggctgttattgggtttaat
ggtcatgtgttttctggactcaaagtgcacccagacaaagaacatctcatttatcctctc
ggctgcactgttattattaagagtctgaaaagtggaagacaaactttccttcatggccac
accaacaacgtatcctgcatttctgtgtccaaaagtggacgctatattgcatctggacag
gtcacgttcatgggatttaaggctgatgttattatctgggactatgagaagaaggagatt
tatgcccgtctcatgctacataaagctagagttgaagatcttagcttctccccaaatgat
aagtaccttgtatcgttgggtggacaggatgatggcagtatcgtagtgtggaacatcgag
agtaaggaggctatatgtggcagtcctgcttcagcacagagtgctggtcactgcctcacc
atcgagtacaccaacctgaacgatgaaatctttgtctctgctggaaatggaactctgcgt
gtatgggagcttgatttgcccaacagaaagatccggcccacagaatgtcagactggacag
ctcaagagaattgtcaaatgcctagagatcccagatgatgataattatttctactgtgga
actactagtggagatattctgaaagtgaacctgaagacaaggttgctgaacagctgtggt
cctgttaaacaaaaattcagcaagggagtgaacactcttaaagtcttgaagactggtgat
attttagttggatcaggagatgggatgttgtctttgtgctcaggagggaatttcaaaacc
attaagagtgttcagttggagggaggggtgacatcagtaaccctgcgtggagacgggcag
cagttctatgttgggacagaagctgcacagatctacaatttaggctacacagacttcaaa
ccagagcttattgctacaaatcataacagtgctgtgaaggacgtggcctttccttttgcg
acatcagagctttttgccacctgttcacagaatgacatacgagtgtggcatactgagacc
tccaaggagcttctgcgtatcacggtgcctaacataacatgcaacgctctgggctttgta
caggatggcaggagcatcttcagtgcttggaatgatgggaagatccgtgtgttcacccca
gagagtgggaagctgaggctgataattcataatgcccacagtatgggagtgactgccata
gcagcgaccaatgactgcaagaggattgtcagtggagggggagaaggacaggtgagagta
tgggagatattccagaactcatatcggctcatcgagaccatgaaggagcacaaagctacg
gttaactgcattaagatcaagagtaacgacaaggagtgtgtgacagccagctctgatgga
gcttgcatcatctgggacctggtgaggttcgtgaggaatcaaatggtcttgtctaacacc
ctgtttagtgttgtatgttaccaccctgaggaattccagatcatcaccagtggcactgac
agaaagattggctactgggaggtgtatgacggttctgcaatcagagaactcgagggctcc
ttgtcgggagctataaatggcatgcacatttctgaggacggaaaatattttgtgactggt
ggagatgacaaattactaaagctctggcactattctgatggtgaagtgacccatgttggc
atcgggcacagtggaagcatcacaaatgtgaggatctgtcccaacagcagatatattgtc
agtaccagtgccgacggagctatcctaaggtggagatacccacaaacctcatag
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