Labeo rohita (rohu): 127166445
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Entry
127166445 CDS
T09007
Name
(RefSeq) immunoglobulin-like and fibronectin type III domain-containing protein 1
Organism
lroh
Labeo rohita (rohu)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
I-set
Ig_3
fn3
Ig_DSCAM-DSCAML_C
Ig_2
ig
THB
C2-set_2
Pur_ac_phosph_N
Motif
Other DBs
NCBI-GeneID:
127166445
NCBI-ProteinID:
XP_050967672
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All DBs
Position
6:complement(28793515..28805220)
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AA seq
1661 aa
AA seq
DB search
MVKQAKGTGVAIRKRSRVPGVMITQYVEELPPGSTTPDFIRKPIPLTIQEGKLAIFKAVV
CGYPVPQVLWARNKGDIADPKYISRYDEKNEEYILEIPRVDSDQADVYKCFAINSFGRAV
CTAALNVIEVGFKKRAPAPKNDPEEFRKMLKKTVVKRKEKQWKEGEIDPKFWEVLLSAPR
KDYERICQEFGVTDFRWMLRKLNQKKKEREEEQAKYVEKIHRMKQIEVKTDGTAEFELDM
QLKDPSSKVLLFKDGEMLDYGDGTDESTKHNMQKFGETYLFSIRDVGPEDAGLYQVDVEE
VNMFSTSLMLPDVEFNTALKDTKVTEGQDAVFECALSDPVPQITWCVNDISVDHGEKYDI
TVSEDKQVHKLAVKKCTKEDKGVYTAVAGLRSSQGTLIVEDDPSARGKGEDADELARHLA
EEKARLQREKDEAARRAQAEKDEAARKAQAERDEAARKAQAERDEAARKAQAERDEAARR
AQAERDEAARKAREEQEAAARRAQAERDEAARKDREEQEEAARRAQAERDEAAKKDREEQ
EEAARRAQAERDEAARRAQAERDEAARKAREEQEEAARRAQAERDEAARRAQAERDEAAR
KAWEEEEAARRAQAKLDEAARKARKEEEAARRAQAKLDEAARKAREEEEAARRAQAKLDE
AARKAREEQDEATRRAQAKKDEVARKAQAERDEAARRAQAERDGAAHRAQAEKDEAACRA
QAEKDEAARKAREEQDEAARRAQAEKDEAACKAQAERDEAARKAQAERDEAARRAQAEKD
EEARKAKAAERMAAMVAGNGGSSLGEGNEGDGTGKNGKGGDGVLGDGLGNGKHGKGDALD
LDGSGGDGSGEKRKKRVRVEDLIPNNIIDHGVHFLNGLSDTAASVGESAEMSCKLSSEDS
TGLWYKDGKKLESKDGLTIVKDGAHHKLIIYDCQEGDSGKYKFEAEGRKSEATLIVEDPP
KIDADALKEFSEPVTVKAGENASFRLPFSGKEPSKIQWFKEDEELLEGHGVRIEKSSAHS
RLLLTKCQRKDTGEIKIKIKNEFATVEATSKLTVLDRPAPPQGPVEIVESSLSAIEFKWR
PPKDDGGCPVTNYNLERQQVGRNTWTKIGDIPGQPSYRDTNIDRGRKYCYRIRAKNSEGL
SDVMTTNDIAAGTLAFPGTPAPPKIVSAFKDCINLAWLPPSSTGGGSIIGYNVEKRKKGS
NFWSQANPKDEPIRDKKYAVKDVIEGMEYEFRVSAINTCGPGEPSCPSECAIARDPKKCP
GMVKDLKITGSSYTSLSLSWSKPKEVKGEEDEAKGYFVEIRPTDQLEWSRCNTNAVIQTS
FTVVGLKSLATYWVRVIAVNEGGEGLPQSLDNYIIAMPPPVKPKFTDKKMKSFMVVKAGN
TVRVSVSFEASPLPDITWLKDGAPIAKHVTITNFEKGSQLFIYTSELSDTGIYTVNVKNM
VGQDTFTIEIRVTDDPKPPGPVELEQNVQGTVTLSWTPSPDEKRDNHLHYMVMKRDSVKQ
TWRTVVDRLFNNKFTVINILPGREYNFRVFAKNDIGLSEPSVSPVWGTTKKREKFTYSMP
VSKTLGFQAAPKFIVPLKLHAAPSGYECYMSCAVTGNPTPHITWYHNNVSLNTNPNYYIT
NVCGVCSLLILRVGPKDMGDKVVAESPLGHDECSTKLVVKE
NT seq
4986 nt
NT seq
+upstream
nt +downstream
nt
atggtgaagcaagctaaaggaacaggtgtggcaatcaggaagagatccagagtgcctggt
gttatgatcacacagtatgttgaagaattgccacctggatctactactcctgatttcatc
agaaaacccatacccttaactatacaggagggcaaactagccattttcaaagcagttgtg
tgtggatatccagtaccacaagttttatgggcacgtaacaagggagatatcgctgatcca
aaatatatttcacgatatgatgagaagaatgaagaatatattctagagataccacgtgta
gattcggatcaagcagatgtatacaaatgttttgctataaattcatttggaagggctgtt
tgtactgctgcactgaatgtcattgaagttggattcaagaaaagagcaccagctcccaaa
aatgaccctgaggagttcagaaaaatgctgaagaaaacggttgtgaagagaaaagaaaag
caatggaaagaaggagaaatcgatccgaagttctgggaggtgttactgagtgcacccagg
aaagattatgaacgcatctgtcaggaatttggagtcactgacttcaggtggatgctgaga
aaacttaaccagaagaagaaagaaagagaggaagagcaggccaagtatgttgagaaaatc
cacagaatgaaacagattgaggtgaaaacggatggcacagcagaatttgaacttgacatg
cagttgaaggatcctagcagtaaagtcctcctcttcaaagatggggaaatgcttgactat
ggagatggaactgatgagtccacgaagcataacatgcagaaatttggtgaaacatacttg
tttagcattagggatgttggcccagaagatgctgggttatatcaagtggatgtagaggag
gtgaacatgttctcaacttcgctaatgctgcctgatgtggagtttaataccgcactgaaa
gacactaaagtgactgaggggcaggatgcagtgtttgaatgtgccttatcggaccctgta
ccccaaatcacctggtgtgtcaatgacatctctgttgaccatggggaaaaatatgacatt
acagtgtcagaagacaagcaggtccacaaactagcagtgaaaaaatgtacaaaagaagac
aagggagtgtatacagctgttgctgggctcaggtcaagccaggggactctgattgtggaa
gatgatcccagtgcccgtgggaaaggtgaggatgcagatgaactagccagacatttagca
gaagagaaagccagactgcagagggaaaaggacgaggcagccaggagggcacaagctgaa
aaagatgaagcggccaggaaggcccaggctgaaagagatgaagcagctaggaaggcccag
gctgaaagagacgaggcggccaggaaggcccaagctgaaagagacgaggcggccagaagg
gcacaggcagaacgagatgaggcagcaagaaaagctcgggaagaacaagaagcagcagcc
aggagggcacaggcagaacgagatgaggcagcaagaaaagatcgggaagaacaagaagaa
gcagccaggagggcacaagcagaacgagatgaggcagcaaaaaaagatcgggaagaacaa
gaagaagcagccaggagggcacaggcagaacgagatgaggcagccaggagggcacaagca
gaacgagatgaggcagcaagaaaagctcgggaagaacaagaagaagcagccaggagggca
caggcagaacgagatgaggcagccaggagggcacaagcagaacgagatgaggcagcaaga
aaagcttgggaagaagaagaggcagccaggagggcacaggccaagctagatgaggcagcc
agaaaagctcggaaagaagaagaggcagccaggagggcacaggccaagctagatgaggca
gcaagaaaagctcgggaagaagaagaggcagccaggagggcacaggccaagctagatgag
gcagccagaaaagctcgggaagaacaagacgaggcaaccaggagggcccaagctaaaaaa
gatgaggtggcccgtaaagctcaggctgaaagagatgaggcggcccgtagagcccaggct
gaaagagatggggcggcccatagagcgcaggctgaaaaagatgaggcggcctgtagagcc
caggctgaaaaagatgaggcagccagaaaagctcgggaagaacaagacgaggcagccagg
agggcccaagctgaaaaagatgaggcggcctgtaaagcccaggctgaaagagatgaggcg
gcccgtaaagcccaggctgaaagagatgaggcggcccgtagagcccaagctgaaaaagat
gaggaagccaggaaggccaaggctgctgaaaggatggcagctatggtggcaggaaatgga
ggatctagcctgggagaagggaatgaaggtgatggaacagggaagaatggaaaaggagga
gatggtgtcttgggagatggattaggaaatgggaaacatggaaaaggagatgcattggat
ttggacggatcaggtggagatgggtcaggtgaaaagcggaagaagcgtgttagagtcgaa
gacctgattcctaacaacatcatagaccatggagtccacttcctgaacggcttgtcagat
actgcagccagtgttggagaatcagcagagatgtcctgcaaacttagcagcgaagatagc
accggattatggtacaaagatggaaaaaagctggagtctaaggatggacttacaattgtc
aaagatggggctcaccacaaacttatcatctatgactgccaggaaggcgattctgggaaa
tataagtttgaggcagaaggacgtaaatcagaggctacattaattgttgaagatccacct
aaaattgatgcagatgccttgaaagaattctcagaaccggttactgtcaaagcgggagaa
aatgcgtctttcagactaccattttcaggaaaagaaccatctaagattcagtggtttaaa
gaggacgaagagttgctggagggtcacggtgtcaggatcgaaaaatcttcagctcatagc
cgtctacttctcactaagtgtcagcgcaaagacactggagagataaaaatcaaaatcaag
aatgaatttgccactgtagaggcaacatcaaaacttacagtacttgacaggccagctcca
ccacaaggacctgtagaaattgtagaaagctccttgtccgccattgagtttaaatggaga
cccccaaaggacgatggtggttgtccagtgactaattacaacctggagcgacagcaggtg
ggacggaacacctggactaaaattggagacattcctggacagccttcctacagagacaca
aacatagatcgtggccgaaaatactgttacagaatccgggcaaagaactcagagggcttg
agtgatgtcatgacaactaatgatattgctgccggcactttggcattccctggcactcct
gctcctcctaaaatagtcagtgccttcaaagactgcattaacttggcctggcttccaccc
tccagcactggagggggcagtatcattggatataatgtggaaaaacgcaaaaagggcagc
aatttttggagtcaagcaaacccaaaagatgaaccaatcagagacaaaaaatatgcagta
aaagatgtaatcgaaggtatggagtatgagttcagagtaagtgctattaacacatgcggg
cctggggaaccaagttgcccatctgaatgtgcaattgcaagggaccccaaaaagtgtcct
ggtatggttaaagacctcaaaataactggatcaagctacaccagtctgtctctttcctgg
agtaaacctaaagaggtcaaaggtgaggaagatgaagcaaaaggctattttgtggaaatc
agacccacagaccaacttgagtggagccgttgcaatacaaacgcggtgattcagacttcc
ttcactgttgtgggattgaagtcactggccacgtattgggttagagtgatcgcagtcaat
gaaggaggagaggggcttcctcagagcttggacaattacatcattgccatgcctcctcca
gttaagccaaagttcactgacaaaaaaatgaaaagtttcatggttgttaaagctggaaac
actgttcgtgtcagcgtcagttttgaggcttctcctttaccagacataacatggctaaag
gatggtgctcctatagccaaacatgtgacgattactaattttgaaaaaggttctcagcta
tttatttacacatcagagctgtctgacactggcatctatacagtcaatgtgaagaatatg
gtgggccaggacaccttcactattgaaataagagtcactgatgaccccaagcctccaggt
ccggtagaactggaacaaaatgtccagggcactgtgactctgtcgtggactccttctccc
gatgagaaacgggacaaccatctgcattacatggtgatgaagcgggactctgtcaagcaa
acgtggcgtacagtggttgaccgcttgttcaacaacaaattcacagtcattaacatcttg
cctggaagagagtacaatttcagagtgtttgctaagaacgatataggcctctcagaaccc
tcagtgtctccagtctggggaacaaccaaaaaaagagaaaaattcacatatagcatgcct
gtatcaaagaccctcggcttccaggcagcccccaaatttattgtccctttgaaacttcac
gctgctccttcaggttatgagtgctacatgagctgtgctgtgacgggcaacccaacccca
catattacctggtaccataataatgtcagcctcaacacaaaccctaactactacatcaca
aacgtgtgtggtgtttgttcgctgctcatcctgagggtcggacccaaagacatgggagac
aaagttgtagccgaaagcccccttggtcatgatgagtgctccaccaaacttgtagtcaaa
gaataa
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