KEGG   Labeo rohita (rohu): 127166486
Entry
127166486         CDS       T09007                                 
Symbol
kdm4c
Name
(RefSeq) lysine-specific demethylase 4C isoform X1
  KO
K06709  [histone H3]-trimethyl-L-lysine9/36 demethylase [EC:1.14.11.66 1.14.11.69]
Organism
lroh  Labeo rohita (rohu)
Brite
KEGG Orthology (KO) [BR:lroh00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:lroh03036]
    127166486 (kdm4c)
Enzymes [BR:lroh01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.66  [histone H3]-trimethyl-L-lysine9 demethylase
     127166486 (kdm4c)
    1.14.11.69  [histone H3]-trimethyl-L-lysine36 demethylase
     127166486 (kdm4c)
Chromosome and associated proteins [BR:lroh03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    127166486 (kdm4c)
SSDB
Motif
Pfam: JmjC zf-HC5HC2H_2 Tudor_2 zf-HC5HC2H PHD_2 JmjN PHD Tudor_3 Tudor_5 Rad9_Rad53_bind LBR_tudor
Other DBs
NCBI-GeneID: 127166486
NCBI-ProteinID: XP_050967744
LinkDB
Position
1:complement(35119384..35137382)
AA seq 1493 aa
MAGVGASAPANPACKIMTFRPTMEEFKDFNQYLVYMESQGAHRAGLAKVIPPKGWKPRRN
YDDIDDFVIQAPIQQMVAGQSGLFTQYNIQKKPLTVQEFRRLANSDMYCTPRYLNYEDLE
RKYWKNLTFVSPIYGADVSGTLYDEDIEEWNIGHLNSILDVIEEDCGVSIQGVNTPYLYF
GMWKTSFSWHTEDMDLYSINYLHFGEPKSWYAIPPEHGKRLERLAIGFFPNSFKSCEAFL
RHKMTLISPSVLKKYSIPFDKITQEAGEFMITFPYGYHAGFNHGFNCAESTNFASIRWIN
YGKVATQCTCSKDMVKISMDPFVRRFQPDRYQAWTQGKDSCPLDHTLATPSTTPELQSWL
QRRRRKAPSTTSVHYPRACSKRLKTVDTAPGKGVSRRSRGAALTSKNKDKEDLEKQEKES
QYSGLAGPCRQMCVVKVTRVENDLLAHSTKQVTDASSERLSTPPLSPTSRESDPNPGHSS
SETSLIFDEGRLSTNTNSTAQPGPEPTSESNVTANVTLGSERTAESPNQTLNCESVSETS
APSIPVTHSPRLNSTGAAVLFSETDSQQAKIETEETVADILTESSIDCGTSALYKERSSI
CLDSALQGSQTSENRTNSEIQTTPFCEMPLLMPELIEERANPQSLAPEMPSLTLAVRPDT
TRPHSPNNNAPVLHLEKLHSPPGITDDVGTCSERPCPDWPFVAPQEGVSQSQNSISDTFI
AKPASSSLVPQWGLPEESKQEGHEHTNPSTDQNTQNESISHFKITTHNILQCSTVADLMD
TRDSEMEREDKQTSLCLEEHSSCLTSSQGSFVESKPFTIWKNLSSQNPAVLIESLQPELV
VGLTTGVSSLTDYAHESLSYTMWSESGCQPEKFPDSPNSSPCTQTWTNLEPIPMQCSDAD
MAPNAPPDLKQENMELEPAEACVLSEQAGSQEPQEEEFKAQEYYEGAKSEHDGSVSDSDS
CESGDKGADSSSESSEENAMSDPEYVETGLEPGEVCTYHMQTVKKTTKSWRHPLRKPTAR
AVPSAVKQQAASDDETLEECATKEEEPETEEWAKPLVHLWQHRKTHFQYEREYNTSAAKT
APHCAVCALFMPYYQPDNLEDRRHDVLMSAAAESQGSCSQEVGLRSRPLIPEICFAYQEG
PCPLNTLLEEDGSSPLVACNSCCVQVHASCYGVAAHDVSPVWTCDRCVSGDLAAGCCLCN
LRGGALKRTIDDRWAHVMCAVGLPEVKFIDVVKRAPIDISAIPVQRYKLKCIYCRNRIKK
LSGACIQCSCGRCPTSFHVTCAHAAGVPMEPDDWPYVVFITCHRHQSRSSSAKVKVSKSE
LEVGQTVISKHKNLRYYSSRVTQVMAQTFYEVMFDDGSFSNDTFPEDIVSRDCAQLGPPE
VGEAVQVKWPDGLFYGAKYLGSNTSYMYQVEFEDGSQVLAKREDIYTLDEDLPKKVKGRL
STASSMRFQDAFFTTQGERKRRRTPNSRFQTDYIAHISPRTFTRNSETRSKAN
NT seq 4482 nt   +upstreamnt  +downstreamnt
atggcaggtgttggggcaagtgccccggctaaccctgcctgtaagatcatgaccttcaga
cctactatggaggagtttaaggactttaaccaatacctggtttatatggagtctcaggga
gctcatcgtgctgggttggccaaggtaattccacccaagggctggaagccacgtcgcaat
tatgatgatattgatgatttcgtcatccaagcacctattcagcagatggtggctggccaa
tcaggactcttcacgcagtacaacattcagaagaaaccactcactgtgcaggaattccgc
agacttgccaacagtgacatgtactgcacacctcgctacctgaactatgaagacctggag
aggaagtactggaagaatctgacattcgtctcgcccatctatggtgctgatgtgagcggc
acactctatgatgaggacattgaagagtggaacatcgggcacttgaactcaatcttggat
gtgattgaagaggattgtggggtgtccattcagggtgtaaacacaccttatctgtacttt
ggaatgtggaaaaccagcttctcttggcacacggaggacatggacctgtacagcatcaac
tacctgcactttggggagcccaaatcctggtatgccatccctccagaacatgggaagaga
ttggagcgtcttgctataggtttctttcctaacagctttaaaagctgtgaggcgttcctg
agacacaagatgacactgatatccccctctgtactaaagaaatacagcataccatttgat
aagataacacaagaagcgggggagttcatgatcacatttccctatggctaccacgctggc
ttcaaccacggcttcaactgtgctgaatccaccaatttcgctagtatccggtggatcaat
tatggaaaggttgctacgcagtgtacatgcagtaaggacatggtgaagatctcaatggat
ccgtttgtcagaagattccagccggatcgctatcaggcttggacacaaggcaaagactca
tgtccattggatcacaccttggccacacccagcaccactccagagctgcagagctggctt
cagagacgtcgcagaaaagcaccctccaccacaagtgtccattatccacgtgcatgctcc
aaacgactgaagactgtggacactgcaccagggaagggggttagtcggaggagtagaggg
gcagctttaacatcaaaaaacaaggataaggaagacctagaaaaacaggaaaaagaatca
cagtactcagggctcgctggtccatgtcggcagatgtgtgttgttaaagtaacaagagtg
gagaatgacttgctggctcactccaccaaacaagttacagatgcttcctctgagcgactc
tcgacccctccactcagccccacatccagagagagtgaccccaatccaggtcactcaagc
tccgagacatctttaattttcgatgaaggtcgattatccacaaacacaaactccactgca
cagcctggacctgaaccaacctcagagagcaacgtcactgcaaatgtgactctgggctcc
gaaagaactgctgaaagtcctaatcaaacattaaactgtgaatctgtctcagaaacaagt
gctccttctattcctgtgacccattcaccgagacttaattccactggtgctgcggtttta
ttttcagaaaccgattcccaacaagctaaaattgaaacagaagagacggtcgccgatatc
ttaactgagagcagcatcgattgtggcacatcagcactttacaaagagcgaagctcgatc
tgtctagactctgctcttcagggttcacaaacctcagaaaacagaacaaactcagaaatc
cagactactccgttttgtgaaatgcctcttctgatgcccgagctcatagaagaaagagcc
aatcctcaatctctcgcacctgaaatgccctccctgactctcgctgtccgacctgacacc
acaagacctcacagtccaaacaataatgcacctgttctccatctggaaaaattacactcg
cctcctggtataacagatgatgtggggacttgttctgaaagaccttgtcccgattggccc
tttgttgcaccccaagaaggtgtaagccaatcacaaaactcaatctcagacacttttata
gcaaaaccagcttcttcttccttggttccacaatggggactaccagaggagtccaaacag
gaagggcatgaacacacaaacccatccacagaccaaaacactcaaaatgagtccatttca
cactttaaaatcactactcacaatattttacaatgttctaccgtagcagatttaatggac
acccgtgactctgaaatggaaagagaggacaaacaaacttctctatgtctcgaagagcac
tcaagctgtctcacgtcctcccagggctccttcgtggagtccaaacccttcaccatttgg
aaaaacctcagctcccagaatcccgcagtgctcattgagagcttgcagcctgagctggta
gtaggtctcaccacaggtgtgagcagtcttacagattatgcacatgaatcgctatcctac
accatgtggtccgaatcaggttgccaaccagagaagttccctgattccccaaactcttca
ccatgcactcagacctggaccaacctggagcccattcccatgcagtgctctgatgcagac
atggctccaaatgcacctccagatttgaagcaggagaacatggagttggaaccagctgaa
gcttgtgtgctcagtgagcaagcaggctctcaggaacctcaggaggaagagtttaaagct
caggagtattacgaaggtgcaaagtcagagcatgatgggtctgtgagtgactctgattcg
tgcgaatcaggagataaaggtgctgacagcagcagtgaatccagtgaggagaatgcgatg
agtgaccctgagtatgtggaaacgggcctggagccaggggaagtttgtacatatcacatg
caaactgttaagaagacaactaagagttggcgtcaccccctcagaaagcccacggcaaga
gcagtgccaagtgctgtgaaacagcaggctgccagcgacgatgagactttagaggagtgt
gcaactaaagaggaggagccagaaactgaggaatgggcaaagcctttagtgcatctgtgg
caacacagaaaaactcattttcagtatgaacgagagtataacacatctgcagctaaaact
gctccacactgtgctgtctgcgcccttttcatgccgtactatcagcctgacaatttagag
gatagaaggcatgatgttttgatgagcgctgccgcagagtctcaggggtcatgttcacag
gaggtgggcttgagatcacgacctttgatccctgaaatctgctttgcgtaccaggagggc
ccatgtcccttgaacacgctactggaggaggatggatccagtcctcttgtggcctgtaat
agctgctgtgttcaagttcatgccagttgctacggtgttgctgctcatgatgttagccca
gtgtggacatgtgaccgatgtgtgagcggagacctggcagctggatgctgtttgtgtaac
ctaaggggaggtgcattaaaaagaaccatagatgacagatgggcccatgtaatgtgtgct
gtgggtctccctgaggtgaagttcattgacgtggtgaagagagctcctattgacatcagt
gccatacctgtacagagatataaactaaagtgtatatattgccgtaacaggataaagaag
ctgtctggagcatgtattcagtgctcatgtggtcgttgtccaacctcgttccatgtcact
tgtgcacatgcggctggagtgcccatggagcctgatgattggccgtatgtggttttcatc
acctgtcacaggcaccaatcacggagctccagtgctaaagtaaaagttagcaaaagtgaa
ttagaagtgggccagacggtgatctccaaacacaaaaatcttcgttactacagctcacgt
gttacccaggttatggcccaaacgttttatgaggtcatgtttgatgatggctcattcagc
aatgatacattccctgaagacattgtgagcagagattgtgcccagcttggacctcctgaa
gtgggggaggctgttcaggtgaagtggcctgatggacttttttatggagccaagtacctt
ggctctaacacgtcatatatgtatcaggtggaatttgaagatggatcccaagtactggca
aagagagaagacatttatacgctggatgaagacctacccaaaaaagtcaaaggtcgtttg
tcaacggcgtccagcatgcgtttccaggatgcgttcttcaccacacaaggtgaaaggaaa
aggcgacgcacaccaaattctcgattccagacggattatatcgcccatattagccctcga
accttcaccaggaactctgaaacacgcagtaaagccaactaa

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