Labeo rohita (rohu): 127166514
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Entry
127166514 CDS
T09007
Symbol
srsf3a
Name
(RefSeq) serine/arginine-rich splicing factor 3a isoform X1
KO
K12892
serine/arginine-rich splicing factor 3
Organism
lroh
Labeo rohita (rohu)
Pathway
lroh03040
Spliceosome
lroh05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
127166514 (srsf3a)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
127166514 (srsf3a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
lroh03041
]
127166514 (srsf3a)
Spliceosome [BR:
lroh03041
]
Common components
Common spliceosomal components
SR proteins
127166514 (srsf3a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_5
Motif
Other DBs
NCBI-GeneID:
127166514
NCBI-ProteinID:
XP_050967802
LinkDB
All DBs
Position
6:complement(25692792..25700748)
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AA seq
215 aa
AA seq
DB search
MCQCLYSPECTDLLFGKRKSERGHLRTPFPVICQLFRCAFEFEIGEDMGDPSLSRDCPLD
CKVYVGNLGNSGNKTELERAFGYYGPLRSVWVARNPPGFAFVEFEDPRDATDAVRELDGR
TLCGCRVRVEMSSGEKRSRYRGPPPSWNRRPRDDYRRRSPPARRRSPRRRSFSRSRSRSL
SRERRRERSLSRDRNYKPSRSFSRSRSRSRSNGRK
NT seq
648 nt
NT seq
+upstream
nt +downstream
nt
atgtgtcagtgtctttattcgcctgaatgcacggacctgctttttggcaaaagaaaaagc
gagaggggacatctcaggacaccttttccagtgatctgccagctttttaggtgtgcattt
gagtttgagattggtgaagacatgggagacccttccctaagccgggactgcccactggat
tgtaaggtctatgttggtaatttgggcaacagtggtaacaaaactgaactggagagagca
tttggctattatggtcccctgaggagcgtatgggtggcaagaaatcctcccggctttgct
tttgtggagtttgaggaccccagagatgcaaccgatgctgtgagagagcttgatggaaga
acactgtgtggttgtcgagtgcgcgttgaaatgtccagtggtgagaagcggtcaagatat
cgaggaccacccccttcttggaatcgtcggccacgtgatgattatagacggcgcagtcca
cccgctagacgccggtcacctaggaggcggagctttagtcgtagtcggagcaggtccctt
tccagagagaggagaagagagaggtctttgtctcgcgatagaaactataaaccttcaagg
tctttctcaagatcacgcagtcgttcacgttccaatggtcggaagtga
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