KEGG   Labeo rohita (rohu): 127166617
Entry
127166617         CDS       T09007                                 
Symbol
tubb1
Name
(RefSeq) tubulin beta-1 chain
  KO
K07375  tubulin beta
Organism
lroh  Labeo rohita (rohu)
Pathway
lroh04145  Phagosome
lroh04540  Gap junction
lroh04814  Motor proteins
lroh05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:lroh00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    127166617 (tubb1)
  09144 Cellular community - eukaryotes
   04540 Gap junction
    127166617 (tubb1)
  09142 Cell motility
   04814 Motor proteins
    127166617 (tubb1)
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    127166617 (tubb1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:lroh03036]
    127166617 (tubb1)
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:lroh04812]
    127166617 (tubb1)
   04147 Exosome [BR:lroh04147]
    127166617 (tubb1)
Chromosome and associated proteins [BR:lroh03036]
 Eukaryotic type
  Centrosome formation proteins
   Microtubules and associated factors
    Other tubulins
     127166617 (tubb1)
Cytoskeleton proteins [BR:lroh04812]
 Eukaryotic cytoskeleton proteins
  Microtubules
   Tubulins
    127166617 (tubb1)
Exosome [BR:lroh04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   127166617 (tubb1)
  Exosomal proteins of colorectal cancer cells
   127166617 (tubb1)
  Exosomal proteins of bladder cancer cells
   127166617 (tubb1)
SSDB
Motif
Pfam: Tubulin Tubulin_C Misat_Tub_SegII Tubulin_3 Tubulin_2
Other DBs
NCBI-GeneID: 127166617
NCBI-ProteinID: XP_050967995
LinkDB
Position
6:30436282..30442121
AA seq 469 aa
MREIVHLQIGQCGNQIGSKFWEVISDEHGINRTGAYEGDMDVQLERVNVYFNEAHGGKYV
PRALLVDLEPGTMDSVRGSHIGQLFRPDNFIHGNSGAGNNWAKGHYTEGAELVEQVVDRV
RNEAESCDCMQGFQFIHSLGGGTGSGMGTLIINKIREEYPDRIMNSFSVMPSPKVSDTVV
EPYNATLSIHQLIENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSLTMSGVTTSL
RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTARGSQQYRALTVPELTQQMFDARNMM
TACDPRRGRYLTVAGIFRGRMSTKEVDEQMLAIQQKNSNYFVDWIPHNVKVAVCDIPPRG
LKMASTFIGNNTAIQEIFKRIGEQFSLMFRRKAFLHWYTGEGMDELEFTEAESNLNDLVS
EYQQYQDATADMDYDAEDEVTEEEGLSSTARSTLVEIKTEVVTETSVSE
NT seq 1410 nt   +upstreamnt  +downstreamnt
atgcgtgagatcgttcatctacagatcggacagtgtggaaatcagatcggctcaaagttc
tgggaggtgatcagtgatgaacatggtattaacagaacaggagcgtatgagggcgacatg
gacgttcagctggagagggtcaatgtttacttcaatgaagcacatggtggcaaatatgtt
ccaagagcattgttagtggacctggagccagggactatggacagcgtgaggggcagtcac
ataggacagcttttcagaccggataactttatacacggcaattctggagccggcaataac
tgggccaaaggtcactatactgagggcgcagaacttgtggagcaggtcgtggatcgcgtt
cgtaacgaagccgagagctgcgactgcatgcagggctttcagttcatccactctctgggc
ggtggcaccggttcgggaatgggtaccctgattatcaacaagatccgagaagagtatcct
gaccgcatcatgaatagtttcagcgtaatgccctcaccgaaggtctccgatacagtagtc
gagccgtataacgcgaccctatcgatccaccagctgattgagaatacagacgagacgtat
tgtattgataacgaagcgctgtacgatatctgcttccgcactcttaagctcacaacacca
acttatggagatctcaaccaccttgtatccctcaccatgagcggggtcacgacctccctc
cgcttcccaggtcagctaaacgctgaccttcggaagcttgccgtcaatatggtgcccttc
ccgcgtctccatttcttcatgcctggtttcgctcctctcacagcacgcgggagccaacaa
taccgtgccctaacggtgcccgagctcacccagcagatgttcgacgcccgaaatatgatg
accgcgtgcgacccgcgtcgagggcgctatctcacagtggcaggcattttccgtggtcgc
atgtccactaaagaggtcgacgagcaaatgctagccattcagcagaagaacagcaattac
ttcgtggactggatccctcacaacgtcaaagtggccgtttgcgacatcccgccacgaggc
ctcaaaatggcctccaccttcatcggaaacaacaccgccatccaggagattttcaagcgc
ataggagagcagttctcgctcatgtttcgacgcaaggccttcctgcattggtacacgggg
gagggcatggatgagctggagttcaccgaggccgagagcaacctgaatgatttggtttca
gagtaccagcaatatcaggatgccaccgccgacatggattacgatgcagaagatgaagtg
acagaggaggagggtctgtcatcaacagcacgcagcaccctagtggagattaagactgag
gtggtcactgaaacttctgtcagcgaatga

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