Labeo rohita (rohu): 127166644
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Entry
127166644 CDS
T09007
Symbol
dync1i2b
Name
(RefSeq) dynein, cytoplasmic 1, intermediate chain 2a isoform X1
KO
K10415
dynein cytoplasmic 1 intermediate chain
Organism
lroh
Labeo rohita (rohu)
Pathway
lroh04145
Phagosome
lroh04814
Motor proteins
lroh05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
127166644 (dync1i2b)
09142 Cell motility
04814 Motor proteins
127166644 (dync1i2b)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
127166644 (dync1i2b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
lroh03036
]
127166644 (dync1i2b)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
lroh04812
]
127166644 (dync1i2b)
Chromosome and associated proteins [BR:
lroh03036
]
Eukaryotic type
Centromeric chromatin formation proteins
SAC (spindle assembly checkpoint) factors
Motor proteins
Dynein complex
127166644 (dync1i2b)
Cytoskeleton proteins [BR:
lroh04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Dyneins
127166644 (dync1i2b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
Beta-prop_THOC3
WD40_Prp19
Beta-prop_WDR3_1st
WD40
Dynein_IC2
Beta-prop_WDR5
WDR55
Beta-prop_EML
Beta-prop_EML_2
Beta-prop_WDR36-Utp21_1st
WD40_WDHD1_1st
Beta-prop_RIG_2nd
Beta-prop_WDR19_1st
Beta-prop_HPS5
EIF3I
Beta-prop_TEP1_C
Beta-prop_TEP1_2nd
Beta-prop_WDR3_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_EIPR1
Beta-prop_CAF1B_HIR1
WD40_MABP1-WDR62_2nd
ANAPC4_WD40
WD40_RFWD3
Beta-prop_SPT8
Beta-prop_DCAF4
Beta-prop_IP5PC_F
Motif
Other DBs
NCBI-GeneID:
127166644
NCBI-ProteinID:
XP_050968032
LinkDB
All DBs
Position
6:3531154..3549556
Genome browser
AA seq
645 aa
AA seq
DB search
MSDKSELKAELERKKQRLAQIREEKKRKEEERKKKELDGRKEGASPPQDDSDLERKRREA
EALLQSMGIVDASMVQPLRVVTEDTCLFHYLVPPPMSPSAKSVGTPSETGSQDSGDGGTG
PRTLHWDSDPSTLLLHSDSQLGRGPLKLGMSKVTQVDFPPKEMVSYSKETQTPTQTHHKD
DEEEEEDLGVTQPVLEQQEEKDSQKEEEEALPHELTEEEKQQILHSEEFMTFFDHSSRIV
ERALSEQVDVFFDYSGRDLQDKEGESQAGAKLSLNRQFADERWSKHRVVTCLDWSPQYPE
LLVASYSSNEDAPHEPDGVALVWNMKYKKTTPEYVFHCQSAVMSAAFAQFHPNLVVGGTY
SGQIVLWDNRSNKRTPVQRTPLSASAHTHPVYCVNVVGTQNAHNLISISTDGKMCSWSLD
MLSTPQDSLELVFKQSKPVAVTSMSFPLGDVNNFVVGSEDGSVYTACRHGSKAGISEMFE
GHHGPITGLDCHTAAGPVDFSHLFVTSSFDWTVKLWSTKNNKPLYSFEDNSDYVYDVMWS
PTHPALFACVDGVGHLDLWNLNNETEVPTASVTVEGNPALNRVRWAQSGREVAVGDSEGQ
VHIYDVGEQISVPRQDEWTRFVLTLTEINENREDVEELAAQRLAA
NT seq
1938 nt
NT seq
+upstream
nt +downstream
nt
atgtctgacaaaagtgagctaaaagcagaattagaaagaaagaaacaacgactggctcaa
atcagggaggagaagaagagaaaagaggaagaacgcaagaagaaagagctggatggacgg
aaggagggagcgtctcctccgcaggatgactctgatctggagaggaagaggagggaggca
gaggctttgctgcagagcatgggcatagtggacgcctccatggtgcaacctctgcgtgtg
gtaacagaggatacatgtctgtttcactatttagtcccccctcccatgtccccttctgcc
aaatcagtgggcacacccagcgaaacgggcagccaggattcaggagatggcgggacggga
ccgaggactcttcattgggactctgacccctctactctactgctccattcagactctcag
ctcggacgtggtccgttaaaactgggcatgtcaaaggtcacgcaggtggatttcccaccc
aaagagatggtgtcgtactcaaaagagacgcagacgcccacacagactcatcacaaagac
gatgaggaggaagaggaggatttgggagtaacgcagcctgttctggagcaacaagaggag
aaagactctcagaaagaggaagaggaagcgcttcctcatgagctgacggaggaagagaaa
cagcagattcttcactcggaggagttcatgactttcttcgaccacagctctcgtatcgtg
gagcgagctctctccgaacaggtggacgtgttttttgactacagcggacgagaccttcag
gataaagagggagagtctcaggctggagccaaactctccctgaacagacagtttgcagac
gagcgctggtcgaaacacagagtcgtcacctgtctcgactggtcaccgcagtaccctgag
ctgctggtggcgtcatacagcagtaatgaagatgctccacatgagcccgatggtgtggct
ctcgtctggaacatgaaatataagaaaaccacaccagaatatgtcttccactgccagtct
gcagtgatgtcagcagcgtttgcacagtttcatcctaatctggtggttggaggcacgtac
tcggggcagatcgttctgtgggacaaccgcagtaacaaacgcacccctgtgcagaggacg
ccgctctcggcctcggctcacacgcacccggtgtactgtgtgaatgtggtggggacgcag
aacgctcacaatctcatcagcatttccactgatggcaagatgtgctcctggagtctggac
atgctgtcaacaccacaggacagtctggagctcgtgttcaaacagtccaagcctgtggcc
gtcacctccatgtcatttcctctgggtgacgtcaataattttgtggtgggcagtgaggac
ggctccgtctacaccgcatgcagacacggcagcaaagcgggcatcagtgagatgtttgag
ggtcatcatggaccaatcacaggcctcgactgccacacagcggcaggaccggtcgacttc
tctcacctgtttgtcacttcctcttttgactggaccgtcaaactctggagtaccaagaac
aataagcccttgtactctttcgaggacaattcagactacgtgtacgatgtcatgtggtct
cccacacatcccgctttgtttgcctgtgtggacggagttggacatttggacctgtggaac
ctcaacaacgaaactgaggttcccacagcaagcgtaacggtggagggaaatcctgcgctg
aaccgcgtgcgctgggctcagtcgggacgagaggtggccgtcggagactctgagggccag
gtgcacatttacgacgttggagagcaaatctcagtgccgcggcaggacgagtggacgcgg
tttgtgctcacgctcaccgagatcaacgagaaccgcgaggacgtggaggaactggccgct
cagcgattggctgcatga
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integrated database retrieval system
