Labeo rohita (rohu): 127166674
Help
Entry
127166674 CDS
T09007
Symbol
chl1b
Name
(RefSeq) neural cell adhesion molecule L1-like protein isoform X1
KO
K06758
L1 cell adhesion molecule like protein
Organism
lroh
Labeo rohita (rohu)
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
lroh04515
]
127166674 (chl1b)
Cell adhesion molecules [BR:
lroh04515
]
Immunoglobulin superfamily
L1 family
127166674 (chl1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
I-set
Ig_3
fn3
Ig_2
ig
Bravo_FIGEY
V-set
FN3_DSCAM-DSCAML_C
Pur_ac_phosph_N
Ig_5
C2-set_2
C2-set_3
Fn3_VIN3
Ig_PDGFR_d4
Ig_C17orf99
Izumo-Ig
Motif
Other DBs
NCBI-GeneID:
127166674
NCBI-ProteinID:
XP_050968090
LinkDB
All DBs
Position
6:27799977..27898175
Genome browser
AA seq
1259 aa
AA seq
DB search
MRLLRKILLLLGACLNMSCRYQSNALDIPLEVLARINMEQLPTITEHSPASLIAFPFEES
FPMKCEATGNPGPEFKWTKNGQDFDPYQDPRLITLDDSGTFIIPNNGNLTEFQGNYRCFA
TNKLGTAMSEEIEFVVPNVPKFPKEIIDPIEVMEGQSVILECNPPKGIPPLQIYWMTISL
QHIEQDERVSVGLNGNLYFSNAIETDSRRDYCCFAAFPRIRTIVQKTAMSVVVKSNKLMK
DSGSGSGRGYANSLLERKPSLLTPTGKESHTYLVKGEDLQLECIAEGFPTPKVEWVKTGF
HKLPERAVVESHGKLLTVEMVNEEDEGKYMCRAKNPHGEVMHYFHVTVEEPPEFEIEPQS
QLVTIGADVVIKCVVKGNPQPTVAWRVNGRPLNEVPTSNRKVLKDGTISIHNAKPENSAV
FQCEATNRHGTILANANIMIMNIQPLILTENNLQYMAVEGKGVVMHCKVFSSPTSSITWS
KADSADVVEGERFSVHKNGSLEIHNAMKEDMGEYSCFAQNTEGKVAIAATLEVKDPTRIV
DPPHDLRVLVGTTIQFSCQAEYDPSIGEDFEIIWEKDGMALNGSENARYILDDGVLEIIN
VSFGDQGLYVCVARTPVDQDMAVAQLSVVDVPDPPEDVILTEHNGRSVKLQWIPGDDHNS
SITEFVIEFEESQHEPGSWREMRRVPGNHHSALLKLHGHLDYRFRVSAVNEVGRGRPSQD
TERYKTPASAPDKNPENIKIEGHLPHEMDINWEPLSPIEHNGPGLEYKVSYRRQGAEEEW
MEHMVKRHSFVVKNTPTFVLYEVKIQAKNHAGWGPDPKIITAYSGEDFPSASPEDVSVEV
MNNTMVKVRWDHVHKDKLNGHLGGYRISFWRLRSLQDSKKTHGDKHTLTFSGERNHAVVT
GLRPFSEYSLIVMAFNSRGNGPGSHPVSFKTPEGAPGQPAAFSVTNIQKHKVTLTWSPPV
DANGVIIGYILQYQLINDTEELGSLMTLNISADSNKLHLQDLEALSKYKFYLRSCTRVGC
GPAVSEERTTVPEATLLNISTSVSHNFANISWIPGTEQTESELYVAFMNNREGNWKISDA
LNSSKTFHLIEGLEPGTEYTVRLMTKSWVDNSSIFEDVIRTSAKGLASIHGGISNQGWFI
GLMCAIALLTLIVLIACFVNRNKGGKYSVKEKEDLHPDLESQGINDDTFCEYSDNDEKPL
KSSQHSLNGDLKGGDSGDSMVDYGDEDAHFNEDGSFIGEYSGRKERVSMEIKGNNQSTA
NT seq
3780 nt
NT seq
+upstream
nt +downstream
nt
atgcggttgctacggaaaatcctcctccttttgggcgcttgccttaatatgagctgcagg
tatcagagtaatgccttggatattccacttgaagttttagcacgcataaacatggagcag
ctgcccacaattacagagcactcacccgcctctctgattgcctttcccttcgaagagagc
ttcccaatgaagtgtgaggccacaggaaaccctggaccggaattcaagtggacaaagaac
ggtcaagactttgatccttatcaggatcccagattgataacattagatgattccggaaca
ttcatcattcccaataatggaaatctcacagagttccagggcaattaccgctgctttgca
accaacaagttaggaacggctatgtcggaagagattgaatttgttgttccgaatgttcca
aagttccctaaagagatcatcgatccgattgaggttatggaaggtcagtcagtcattctg
gagtgcaacccacctaaaggaatccccccactgcagatctactggatgacaattagtcta
cagcacatcgagcaggacgagagagtatcagtgggtctgaacggaaacctgtacttctca
aatgctattgagaccgacagtcgcagagactactgctgctttgctgccttcccacgcata
cgaaccatcgtccagaaaaccgccatgtctgttgtggtcaaaagcaacaagttaatgaag
gactcaggctctggtagcggcagaggttatgcaaactctctcctggagaggaagcccagt
ctactgacgcccacaggaaaggagtcgcatacatatttggtgaaaggcgaagatcttcaa
ttggagtgtattgcagagggcttccccacaccaaaggtggagtgggttaaaacaggcttc
cacaagcttccagaaagagccgtggtggagagtcatgggaagctgcttactgtagagatg
gtgaatgaggaggatgaagggaaatatatgtgcagagccaaaaatccccatggagaggtt
atgcattattttcatgttacagtagaggagcctcctgagtttgagattgaacctcaaagc
cagttggtgacaattggagctgatgtggttatcaagtgtgtcgtgaaaggaaatcctcaa
cctactgttgcgtggagggtcaacggccgaccactgaatgaggtcccgacctccaatagg
aaagtcttaaaagatggcacaatttccatccacaacgcaaagcctgaaaacagcgctgtt
ttccagtgtgaggccacaaacagacacggcaccatcctagccaatgccaacatcatgatt
atgaacatccagcccctgatcttaacagaaaacaatctgcaatatatggcagtggagggg
aaaggtgtggtcatgcactgtaaggtcttcagctcaccaacatccagtattacatggagc
aaagctgacagtgccgatgtagtggaaggagaacggttttctgttcataagaatggttca
ctggagatccacaacgcgatgaaagaggacatgggggagtattcttgttttgctcaaaac
actgagggcaaagttgccattgctgcaacacttgaagtcaaagatcccaccagaatagtc
gatcctccacacgatttgcgggttttggttggaaccacaatccagttttcatgccaggca
gagtacgatccctcaatcggtgaagactttgagatcatctgggaaaaagatggcatggcc
ctcaatggcagcgagaacgcacgatatatcctggacgatggagtgcttgaaatcattaat
gtgagctttggagaccagggattgtatgtctgtgtggcaagaacaccagtcgaccaggac
atggcggttgcacagctttcagttgtggatgttcctgatccaccagaggatgtgatcctt
accgaacataatggcagaagtgtgaaactgcagtggattccaggagacgaccataacagc
tccattactgagtttgttatagagtttgaggaaagccaacatgagccgggcagctggagg
gagatgaggagagtaccgggaaaccatcactccgctctgctgaagcttcatggacacctg
gactaccgatttagagtctctgccgtcaatgaggtgggaagaggtcggccaagccaggac
actgaaagatacaaaactccagcatcagcacccgacaagaacccagaaaatatcaagatc
gaaggtcatttgccacatgaaatggatatcaactgggagccactgtcacctattgaacac
aacggacctggtctggagtacaaagtaagctacagaagacaaggtgctgaagaggagtgg
atggagcacatggtgaagaggcactcattcgtggttaaaaacacccctactttcgtcctt
tacgaggtcaaaattcaggccaagaaccacgcgggctggggtccggaccccaaaataata
acagcgtactcaggagaagacttcccttcagcatctccagaggatgtcagtgtagaagtg
atgaacaacaccatggtgaaggtcagatgggaccatgttcacaaggacaaactcaatgga
catctgggtggctacaggataagcttttggaggcttcgtagtctgcaggactcaaagaaa
acacatggtgacaagcacacattgacattctccggcgagaggaaccatgcggtggtcaca
gggcttaggccattctctgaatacagcctcattgtcatggcctttaacagcagaggaaac
gggcctggcagtcatccggtcagctttaaaacacctgagggagctcctggtcaaccagct
gctttcagtgttacaaacatccagaaacacaaggtcaccttgacctggtctcctccggtt
gacgcaaatggagtcataattggctacatcctccaatatcagctaataaatgacacagag
gaactaggttctctgatgaccctcaacatctctgctgacagcaataagctgcacctccag
gatctggaagcactgagcaaatacaagttttacctacggagctgcacgcgggtgggctgc
ggaccagctgtcagcgaggagcgcaccactgtccccgaagccactttgttgaatattagc
acctcagttagtcacaactttgcaaatatcagctggattccaggcacagagcagacggag
tcagagttatatgttgcctttatgaacaaccgtgaaggtaactggaagatttccgatgcg
ctaaattcttctaagactttccacctcattgaagggctcgaacctgggactgaatacaca
gtgcgtcttatgactaaaagctgggttgataattctagtatttttgaagacgttatcagg
accagtgccaaaggtctggccagtattcacggaggcatctccaaccagggctggttcatc
gggctcatgtgcgccatagcgctgctcaccctcatagtgctcatagcgtgcttcgtgaac
cgaaataaaggcggaaagtactcagtgaaagaaaaagaggacctgcaccccgatttggag
tcccagggcataaatgacgataccttctgtgaatacagtgataatgatgagaaaccactg
aaaagcagccagcattcgttgaatggcgacttgaaaggaggggacagcggagacagcatg
gtggactacggcgacgaggacgctcacttcaacgaggacggctcttttatcggagagtac
tctggacgcaaggagagggtctccatggaaatcaagggaaacaatcagagcacagcataa
DBGET
integrated database retrieval system
