Labeo rohita (rohu): 127166766
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Entry
127166766 CDS
T09007
Name
(RefSeq) toll-like receptor 13
KO
K18808
toll-like receptor 13
Organism
lroh
Labeo rohita (rohu)
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
lroh04054
]
127166766
Pattern recognition receptors [BR:
lroh04054
]
Membrane-bound pattern recognition receptors
Toll-like receptors
127166766
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
TIR
LRR_5
TIR_2
LRR_1
LRR_9
LRR_LRWD1
LRR_NXF1-5
ThsB_TIR
Motif
Other DBs
NCBI-GeneID:
127166766
NCBI-ProteinID:
XP_050968266
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Position
6:complement(34164684..34169140)
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AA seq
955 aa
AA seq
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MRQSSAFFFILNCCVLITLTDGFSFSNCTIYFPFEYSGHLKVLCNRMGYWKIPSPLPRNI
VNLDISYNYIYQIAEGDFNRLSNLIILNISHNRISEIHANALSDLPNLEELNLSHNKIKT
VTTKMLDGLASLSQLRLDFNNLEMIENQTFATLSNLRLVNLTNNMLKDISKLHPLLQVPH
LENLYLGNNHFRVFNSSDIPSAFVGLKKLDLSVNPLTVFRMMENIFPALEYLDLSTCFQT
NTFDWFILDKAFLKTVKILNFSRNHVDEKQLGYIMQSFPSVSWMALDGLQGFKVEMLLQK
ACFPSLRGLHLEDNQLSLLTDRIFKPCVHLNELHLRNNGVLKMYKSSFKHLVNLTELRIQ
KNLLTQLNETLQVLPNLRVLDLHLNNIENLACSDFANLTQLRQLYLHRNRIVTIESCVFK
DLETLEELIMNSNQILTVTGTFKLGPRNLRYLYLTNNKLSAIQNDTFKALDSLQMLHLSD
NQIFIIEPHAFAGLINLAEMYLSSNKITGRTLSNHLVFAGTPNLQKLELSCNYFAYESQQ
ALQSPPFVLLSELRTLQINSQRRGLNYIPSNFLNGLKNLQVFYAGNLNIENLHVDTFIHT
PNLTYLDLTANNLANRNALTSRLFGPISGLNKITLGRTHLKSLDFLVDANLSSLTVLRAS
TNDLQFINKTIIQSLPQLKVLDLQNNSFTCDCSNAWFIDWAVKNNKTQVLYLNKYECRYP
LSLSGKSLAAFNTESCNVNYDFICFIYSSSIVILTLLISFVYHFLKWQLVYAYYLFLAFL
NDKKRKQTPNLDFQYDAFISYNAQEEPWVLEELVPKLEDQHGLRLCLHHRDFQPGKAIID
NIVDAIYNSRKTICLITHNYLKSVWCSHEIQVASFRLFDEQKDILVLVFLEDIPAHQLSP
YYRMRKLVKKRTYLRRPKPGEDTRAFWQKLKMAIETKENMEDRKILSGKDEDDHI
NT seq
2868 nt
NT seq
+upstream
nt +downstream
nt
atgaggcaaagttctgcatttttcttcattctgaactgttgtgtcctcataaccctgacc
gatggattttctttcagtaactgcacgatttatttccctttcgaatactctggccatctg
aaggtgctgtgcaacaggatgggctactggaaaataccttcaccgttaccacgcaacatt
gtcaatctggacatttcctacaattacatctatcagatcgctgaaggggacttcaacagg
ctttcaaatctgatcattctaaacatatctcacaacaggatatctgaaatacacgccaac
gcactgagtgacctaccaaacctggaagagctcaacctgtcccacaataaaatcaaaacc
gtaaccacaaaaatgctcgacggtcttgcaagtctctcccagttaagactcgacttcaac
aacctagagatgattgaaaaccagacctttgcgacactttcgaatttgaggcttgtgaac
cttaccaataacatgttaaaggacatttccaaactccatcctcttcttcaagtaccacat
ctggagaacctttacttgggaaacaatcactttagagttttcaactcaagcgacatcccg
tcagcattcgtcggtttgaaaaagttggatctgtcggtgaatcccttgacagtgttccgg
atgatggaaaacatctttcctgctcttgagtacttggacttgtcaacctgtttccagacc
aatacattcgattggtttattctagacaaggcgtttctgaagacagttaaaattctcaac
ttcagtaggaatcacgttgatgagaaacagctgggttatataatgcagagtttcccgtct
gtgtcctggatggcgctggatggtctacaggggttcaaagtggagatgcttttacagaag
gcatgttttcctagtctgaggggtctccacttggaggataaccaactttccttactcacc
gatcgcatttttaaaccatgcgtgcatttgaatgagttgcacctaagaaacaacggagta
ctgaaaatgtacaaatcgtcattcaaacatctagtcaacttgacggagttacgaatacaa
aagaaccttctgacgcaactgaatgaaactcttcaggttctccccaacttacgggtcctc
gaccttcatctcaacaacattgaaaatcttgcctgctctgattttgccaatctgacgcag
ttgcgacaactctatttgcacagaaaccgaattgtgacaatcgagtcgtgtgtatttaag
gatttagaaactctcgaagagctcattatgaacagcaatcaaatactaacggtcactggc
acctttaaactaggcccccggaacttacgatacctgtacttaacgaacaataagttgagt
gccatccaaaatgacacttttaaagctttggattcccttcagatgttgcatctctcagat
aaccagatatttattatcgaaccacatgcgtttgcaggactgatcaatttagcagaaatg
tacctttcatctaacaagatcacaggaagaactctaagcaaccatcttgtgttcgctggt
acacctaacctacaaaaattagaactgagttgcaactactttgcatacgagagtcaacag
gccctacaaagtccaccattcgtcctgttaagtgaactgagaactttgcagattaatagc
caacgtcgaggcttaaactacatcccctcgaacttcctgaatggtctcaaaaacttgcaa
gtcttttatgctgggaatcttaatatagagaatttacatgtggacacatttattcacact
cccaatcttacgtacttggatttgacagctaataatcttgcgaacaggaatgccttgaca
tccaggcttttcgggccaatatcaggcctaaataagattacgttgggtcggactcacctt
aagtctttggacttcttagtcgacgcaaacctctccagtttgacggtcctacgagccagt
acgaatgaccttcaatttataaacaaaaccatcatccagtcgcttcctcaactcaaagtg
cttgacttgcaaaacaacagcttcacgtgcgactgtagtaacgcttggttcatcgactgg
gctgtcaagaacaataagacgcaggtgctttacctgaacaagtacgaatgtcgctatccc
ctctctttaagcggaaagagtctggcggccttcaacactgaatcctgcaatgtgaattac
gacttcatatgcttcatctacagttcttccatcgtcattctcactctactcatttcattt
gtctaccactttctaaaatggcagctggtctacgcgtactacctcttcttagctttcctc
aatgacaagaagaggaagcaaaccccaaatctggattttcaatatgacgctttcatttcg
tacaatgctcaagaggagccatgggtcctggaggaacttgtgcccaaactggaggatcag
cacggcttgagattgtgccttcatcatcgagacttccagccaggaaaagccattatcgac
aacatcgtggacgcaatatacaacagccgcaaaaccatctgcctgatcacgcacaactac
ctgaagagcgtctggtgttcgcatgagatccaggtggccagcttcagactttttgatgag
cagaaagacattttggttctagtttttcttgaggatattcccgcgcaccagctttcgccg
tattaccgaatgcggaagctggtgaagaaacggacgtatctacgtcgccccaaacctgga
gaagatactcgagcattctggcagaaacttaaaatggccatcgagactaaagagaacatg
gaggacagaaagattctttctggaaaagacgaagatgatcatatttaa
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