Labeo rohita (rohu): 127166836
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Entry
127166836 CDS
T09007
Symbol
ube3a
Name
(RefSeq) ubiquitin-protein ligase E3A isoform X1
KO
K10587
ubiquitin-protein ligase E3 A [EC:
2.3.2.26
]
Organism
lroh
Labeo rohita (rohu)
Pathway
lroh04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
127166836 (ube3a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lroh04121
]
127166836 (ube3a)
Enzymes [BR:
lroh01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
127166836 (ube3a)
Ubiquitin system [BR:
lroh04121
]
Ubiquitin ligases (E3)
HECT type E3
127166836 (ube3a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
AZUL
Motif
Other DBs
NCBI-GeneID:
127166836
NCBI-ProteinID:
XP_050968388
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Position
6:24267224..24280885
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AA seq
857 aa
AA seq
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MKRAAAKHLIERYYHQLTEGCGNEACTNEACGSSPGFQRMDNNAAAIKALELYKNNAKLC
DPHPSKKGASSAFPENSAKGAHNFSACSNGKMNHKDLQPSREDFRDLNYLTEEKVYEILS
LCSETEDYSPLIRVIGRVFSSAESLVQSFRKAKQHTKEELKSLQAKDEDKDEDEKETASG
SSTAMEVEPEASASSGDGSSHGENNVQKLGPVEVSVDIEAVRRVYDRLLSNEKIEAAFLN
ALVYLSPNVECDLTYHNVYAADSNYLNVFIIVMENSNLHSPEYLEIALPQFCKAMSKLPL
PALAKLARLWSQYGADQIRRLVETFQQLITYTVISNEFSSENLVNEDDGVVAATKCLKIV
YYANVLGGDLDMDHNEEDDDEPIPESSELTLQELLGEERRNKKGPRVDPLETELGIRASD
CRKPLIPFEEFINEPLNEVLEMDKDYTFFKVETESKFSFMTCPFILNAVTKNLGLYYDNR
IRMYSERRITALYSLVQGQQLNPYLRLKVRRDHIIDDALVRLEMIAMENPADLKKQLYVE
FEGEQGVDEGGVSKEFFQLVVEEIFNPDIGMFTYDESTKLFWFNPSSFENEGQFTLIGIV
LGLAIYNNCILDVHFPMVIYRKLMGKKGTFRDLTDSHPVLYQSLKDLLEYEGNVEEDMMI
TFQISQTDLFGNPLMYDLKEGGDKIPVTNENRKDFVALYAEYMLNKSVEKQFKAFRRGFH
MVTNESPLKYLFRPEEIELLICGSRNLDFLALEESTEYDGGYNKDSRIIKDFWETVHSFE
QEQKRLFLQFTTGTDRAPVGGLGKLKMIIAKNGPDSDRLPTSHTCFNVLLLPEYSTKEKL
KERLLKAITYAKGFGML
NT seq
2574 nt
NT seq
+upstream
nt +downstream
nt
atgaagcgagcggctgcaaagcatttaattgagcgctactaccaccagttaacagagggc
tgtggaaatgaggcctgcacgaatgaggcttgtggctcttctccgggtttccagcgcatg
gataacaatgcagcggccatcaaggccctggagttatataagaataacgccaaactgtgt
gatcctcatccctctaagaaaggagccagttcagccttcccggagaacagtgccaaagga
gctcacaacttctctgcttgcagcaacgggaagatgaaccacaaggatctgcaaccctca
agggaggactttagagatctgaattacttgacagaggagaaggtgtatgaaatcctgagc
ctctgcagtgagaccgaggactattctcctctaatccgtgtcatcggtagggttttctca
agcgcggagagtctggttcagagtttccgcaaagcgaaacaacacaccaaggaagagctc
aagtcccttcaggccaaggatgaggacaaagatgaagatgagaaagaaacggcctctggt
tcgtccacagccatggaggtggaacccgaagcctcggcgtcaagtggagatgggtcatct
cacggagaaaacaacgtccaaaagttaggtcctgtagaagtttcagtagacattgaggcg
gtaagaagagtgtacgaccgactattatcgaacgagaagatcgaagcagcattcctcaac
gcgttagtctacctgtcacccaacgtagagtgtgacctcacctatcacaacgtgtatgcc
gctgactctaattacctgaacgtcttcatcatcgtcatggagaacagtaatctccacagt
ccagaatacttagaaatcgccctgccgcaattctgcaaggcaatgagcaagctacctctt
ccggctctggccaagcttgcgcggttgtggtcgcagtacggcgccgaccagatccgacgt
ctggtcgagactttccagcagcttattacctacacggtcatcagcaatgagttcagcagc
gaaaacctggttaatgaggacgatggtgtggtggcagccaccaagtgcttgaaaatcgtc
tactatgcaaatgtgctgggcggcgacctagacatggatcacaacgaggaggatgacgac
gaaccgatcccggaatccagtgaactgacgctgcaggagcttctcggcgaggaacgacgc
aataagaaaggccctcgggtggatccgctagagacggaactaggcattcgtgcctcggac
tgtcggaaacccctcatccccttcgaggagttcatcaacgaaccgctcaatgaggtgctg
gaaatggacaaagactacaccttcttcaaggtggaaacagaaagcaagttctcctttatg
acctgcccgttcattcttaacgctgtgactaagaatctaggcctgtactatgacaaccgg
attcggatgtacagcgagcgcaggattactgccctctacagtttggtgcagggacagcag
ctgaacccttacctgcgactcaaagtgcgcagagaccacatcatagatgatgctcttgtc
aggttggagatgattgctatggaaaacccggcagacctgaagaaacagctgtatgtggaa
tttgagggtgagcaaggagtggatgaaggaggagtatccaaagagttctttcaactggtg
gtagaggagatctttaacccagatataggcatgtttacctatgatgaaagcacaaaactt
ttctggttcaacccctcatcatttgaaaatgaaggccagttcaccttgataggcatcgtc
ctgggcttagctatctacaataactgcattctcgatgtgcacttccctatggtgatttac
agaaaactaatgggaaagaaaggaacgtttagagacctcacagactctcatccggttcta
tatcagagtctgaaggacctactggagtatgaaggtaatgtggaagaagacatgatgatt
accttccagatctcacaaacagacctgtttggaaacccactaatgtatgatttaaaggaa
ggaggagataaaatcccagttaccaatgaaaacagaaaggattttgtggcactctatgca
gagtacatgctgaacaaaagtgtggagaaacaattcaaggccttcagaagaggattccac
atggtcactaatgaatctccgctgaagtatctgtttcgaccagaggaaattgagctgctt
atatgtggcagcaggaatcttgactttctagcacttgaagagagtacagaatatgacggt
ggatacaacaaagactctcgcattattaaggatttctgggagactgtgcactcatttgag
caggagcagaagaggctgtttcttcagttcaccactggcacagatagagctccagttgga
ggtttaggcaaactcaagatgattattgccaaaaatggccctgactcagacaggttaccc
acctctcatacttgcttcaacgtgctgctcctccctgaatactccaccaaggagaaactt
aaagagagactccttaaagccatcacttacgccaaaggcttcggcatgctctga
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