Labeo rohita (rohu): 127166858
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Entry
127166858 CDS
T09007
Symbol
cntn4
Name
(RefSeq) contactin-4
KO
K06762
contactin 4
Organism
lroh
Labeo rohita (rohu)
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
lroh04515
]
127166858 (cntn4)
Cell adhesion molecules [BR:
lroh04515
]
Immunoglobulin superfamily
Contactins
127166858 (cntn4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_3
I-set
Ig_2
ig
fn3
V-set
Ig_C17orf99
C2-set_2
Sp38
V-set_CD47
Pur_ac_phosph_N
Tissue_fac
NDNF
Interfer-bind
Motif
Other DBs
NCBI-GeneID:
127166858
NCBI-ProteinID:
XP_050968434
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All DBs
Position
6:28144140..28336959
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AA seq
1028 aa
AA seq
DB search
MKLLWKLLVLQSFLGCLAGNTLQSPVFTKQPGSIVFPVDSMEKNREVVFSCEAQGDPPPF
YRWKLNGSLLNPKPSSHHSLSGGNLRINRLNKDEDAGTYQCLASNSFGTIVSREASLTFA
YLENFKTHKRSSVSVREGQGVVLLCGPPPHSGALTFSWIFNEYPSFVKQDSRRFVSQETG
NLYIAKVEPSDVGNYTCVVTNTVTKTRVQGPPTPLILRNDGVMGEYEPKIEVQFPEIVQV
AKGSTVRLECFALGNPVPSISWHRVDGVPFARKVDVRKTSGVMEIPYFQQEDAGTYECVA
ENTKGRNSVQGKLSFFASPQLIEKPQDVQKAIDDSLVWECKATGKPKPSYRWMKNGENLE
PTEERVQVINGALSITRLALADIGMYQCVAGNKYGEVYSNAELRVIAVAPDFSQNQLKGH
TLVKEGGDVLIECKPKMSPRGTISWRKGNDALRESSRIAILESGSLRISNATKSDAGTYA
CVARNQFGEASSSGNLVVKEPTIITTAPNTLDVTVGESIILPCQVSYDPSLELKFTWFFN
EQLIHFGSHGGYFEKVGGQHSAGDIMIRNIQLRHAGKYTCAVQTKVDSSSIATDLIVRGP
PGPPTSIHVEEITDTTATLSWRPGPDNHSPITAYTIQARTPFSLGWQAVSTVPEVVGGSH
LTATVIELNPWVEYEFRVLASNAVGTGEPSKPSKKARTKETVPKVTPANVSGGGGSRSEL
VITWEPVPEELQNGAGFGYVVAFRPFGATGWMQAAVPSPEASKYVFKNETILPFSPFQVK
VGVYNNKGEGPFGPVVTIYSAEEEPGRAPSRLRAKSLSAFDVEVSWKALPWSTSKKRVLG
YELKYWEKNEKEDTASVLRTVGNRTLAIIQGLKGSTTYYITVRAYNTAGTGPPSPAVNVT
TKKPPPSQPPSKVMWNTSNSKIILNWEQVKPLENESEVMGYKVLYKRNRFSRPSIMETNT
TSVELSLPTDEEYIIQIRPFGEGGEGSSSRQITIPKISGPNAIGSASSVSTLSALSTIAL
SLTARTSL
NT seq
3087 nt
NT seq
+upstream
nt +downstream
nt
atgaagttgctatggaaactgctggttctgcagtcattcctggggtgccttgcaggcaac
acgctgcagagccccgtgttcacgaagcagccaggcagcattgtgtttccagtagactcc
atggagaagaacagggaggtggttttcagctgtgaggcacaaggtgaccctcctcctttt
tacaggtggaagctaaatggcagtctgctcaaccccaaacccagctcccatcacagcctc
tccggaggcaaccttcgcatcaaccgtctcaataaagacgaggacgctgggacgtaccag
tgccttgcttccaactccttcgggactattgtcagcagggaggccagcctaacctttgcc
tatttggagaatttcaaaacccacaagcggagttctgtgtctgtccgggaaggacaagga
gtggtgcttctctgcgggccgccccctcactccggagctttgacgttctcctggattttt
aatgagtacccgtcattcgtcaagcaagattctcgtcgatttgtgtcccaggagacaggg
aatctatacatcgctaaagttgagccatctgatgtgggcaactacacctgtgtcgtgacc
aacactgtcaccaagacacgcgtccaaggcccgcctactcctctgatactgcgcaatgac
ggtgttatgggagaatatgagccaaagattgaagtgcagtttccggagattgttcaagtg
gccaaaggttcaaccgtgcgactagagtgttttgcactggggaatccagtaccgtccata
agctggcatcgggtggacggagtcccgttcgcccgtaaagtcgatgtaaggaaaaccagc
ggcgtgatggaaatcccttacttccagcaagaagacgcgggcacgtacgaatgtgtggcg
gagaacacgaaaggaagaaactctgtgcagggaaagctgtctttctttgcctccccccag
ctaattgaaaagccccaggatgtgcagaaggccatcgatgactctctggtgtgggaatgc
aaggccacagggaaacccaagccctcttacaggtggatgaagaatggagaaaacctggag
cctaccgaggagagggtgcaggtcattaatggcgccctgtccatcactcgcctggcgctc
gctgatattggaatgtaccagtgtgtggctgggaacaagtatggagaagtgtactccaac
gctgaactcagagttatcgctgtcgcccctgatttctcccaaaaccagctgaagggccac
actttagtcaaagaaggcggcgatgttctcattgaatgcaaacccaagatgtctcctcga
ggcacaatctcctggcgcaaaggcaacgacgccctccgagaaagcagcagaattgctata
ttggagagcggaagccttcggatatccaacgctaccaaatcggatgctggaacgtacgcg
tgcgttgcccgtaaccagtttggcgaggccagcagctcagggaacctggttgtgaaagag
ccaacaattattacaactgctcccaacacgctggacgtgactgtcggcgagagcatcatt
cttccctgccaggtgtcctacgatccctcgctggagctcaagttcacctggtttttcaac
gagcagctcatccacttcggcagccatgggggatacttcgaaaaagttggcggacagcac
tcggcaggtgacatcatgatccggaacattcagctgaggcatgctgggaagtacacgtgt
gccgtgcagaccaaggtggacagcagctccatcgcaactgacctgattgtcagaggtccc
cccggcccccctaccagcatccatgtggaagaaatcacagataccactgccactctctcc
tggaggcctggtcctgataatcacagtccaattactgcctacaccatccaggctagaacc
cctttctccctcggctggcaagctgttagcacagtgccggaggtggtcgggggctcgcat
ctgactgctacagtcatcgagctcaacccctgggtggagtatgagttcagagtgttggca
agcaatgcagtgggcacaggagagcccagcaaaccctcgaagaaagccaggacgaaagaa
acagttcccaaggtcaccccagccaacgtgagcggaggaggtggcagtcgatcagagtta
gtcatcacttgggagcccgttcctgaagagctccagaacggagcggggtttggctacgtc
gttgctttccggccctttggcgccaccgggtggatgcaggcggcagttccctctcccgaa
gcctctaaatacgtcttcaaaaacgagaccattttacccttctctccattccaagtcaaa
gtgggggtgtacaataacaagggggaaggacctttcggacccgtggtcaccatctactct
gctgaggaggagcctggaagggcacccagtcgacttagagccaagagtctttcagcgttt
gacgttgaggtgtcctggaaagcccttccctggagcacaagcaagaaacgtgttctcggc
tatgagttgaaatactgggagaagaatgagaaagaagatacagctagcgtgctaaggaca
gtaggaaaccggacattggccattattcagggcttaaaaggaagtaccacctattatata
acggtgagagcctacaacacagctggaacaggaccaccaagtccagcagtcaatgttaca
accaaaaaacctccccccagccagccgccctcaaaagtcatgtggaatacatcaaattct
aaaatcatcctgaactgggaacaggtgaaacctctagaaaatgaatctgaggtcatggga
tacaaggtactgtataagcggaaccgattcagcaggcccagcattatggagaccaacacc
acctcagtggagctctcgctgcccacagatgaggagtacatcatccagatcaggcctttt
ggagaaggaggggaaggcagcagtagccggcagatcaccattcccaaaatatcaggtccc
aatgccatcggctcagcttccagcgtgtccactctctctgctctcagtacaatagctctc
tccctcacagctcgcacatctttatga
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