Labeo rohita (rohu): 127166918
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Entry
127166918 CDS
T09007
Symbol
shmt2
Name
(RefSeq) serine hydroxymethyltransferase, mitochondrial isoform X1
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
lroh
Labeo rohita (rohu)
Pathway
lroh00260
Glycine, serine and threonine metabolism
lroh00630
Glyoxylate and dicarboxylate metabolism
lroh00670
One carbon pool by folate
lroh01100
Metabolic pathways
lroh01200
Carbon metabolism
lroh01230
Biosynthesis of amino acids
lroh01240
Biosynthesis of cofactors
lroh04981
Folate transport and metabolism
Module
lroh_M00141
C1-unit interconversion, eukaryotes
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
127166918 (shmt2)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
127166918 (shmt2)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
127166918 (shmt2)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
127166918 (shmt2)
Enzymes [BR:
lroh01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
127166918 (shmt2)
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Motif
Pfam:
SHMT
Flavi_NS5
Motif
Other DBs
NCBI-GeneID:
127166918
NCBI-ProteinID:
XP_050968575
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Position
6:35111997..35136508
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AA seq
499 aa
AA seq
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MLTLTLRQLIRPVCRRVTATAGVRSQHSAAAFADDERSWTGQESLAQDDPEMWDLLQKEK
DRQCRGLELIASENFCSRAALEAQGSCLNNKYSEGYPGKRYYGGAEVVDQIELLCQKRAL
EAFDLDPALWGVNVQPYSGSPANFAAYTAVLNPHERIMGLDLPDGGHLTHGYMSDVKRIS
ATSIYFESMPYKLNTKSGLIDYDQMELTARLFRPKLIIAGTSAYARLIDYSRIKKLCTEL
NAYMLADMAHISGLVAGKAIPSPFEHSDLVTTTTHKSLRGSRAGLIFYRKGVRSVDKKGK
EVMYDLEEKVNFSVFPSLQGGPHNHAIAGVAVALRQATTPMFREYVAQVLKNSKAMADAL
LKKGYTLVSGGTDNHLVLMDLRPQGMDGARAERVLELVSITANKNTCPGDKSALTPGGLR
LGTPALTSRQFKESDFQQVVDFIDQGIKIALDVKKKTKKLSDFKSFLLEDAETASRIADL
RGRVEAFARPFPMPGFHDH
NT seq
1500 nt
NT seq
+upstream
nt +downstream
nt
atgttgacattgacattgagacagctgatcaggcccgtgtgccggcgcgttacggccacg
gccggcgtcagatcccagcattcggcggcggcgttcgccgacgacgagcgctcgtggacg
ggacaggagagtctggctcaggacgacccggagatgtgggaccttctgcagaaggagaag
gacagacagtgccgaggactggagctcatcgcctctgagaacttctgcagtcgtgcggct
cttgaggctcaaggttcgtgtctcaacaacaagtactctgaaggatacccgggaaaaagg
tattacggcggtgcggaggtggttgatcagatcgagttgttgtgtcagaagagggcgctg
gaggcgtttgacctcgacccggcgctgtggggcgtcaatgttcagccctactccggatct
ccagctaatttcgccgcttacacggccgtcctgaaccctcacgagcgcatcatgggcctg
gacctgcccgacggcggacatctcactcacggatacatgtctgacgtcaagcggatctcg
gccacctccatctactttgagtcgatgccctacaaactcaacactaaatccggtctgata
gactacgatcagatggagttgacggctcgactcttccgacccaaactcatcatcgccggc
accagcgcttacgctcgcctcatcgactacagccgcatcaagaagctgtgcaccgagctg
aacgcgtacatgctggcggacatggctcacatcagcgggctggtggccgggaaagccatt
ccctcgccgttcgaacactccgacctcgtcaccacgaccacccacaaatcgctgcgagga
tccagggcggggcttatattctaccgtaagggcgtgcgctcggtggataagaagggcaag
gaggtcatgtacgacctggaggagaaggtcaacttctctgtgttcccttcacttcagggc
ggcccgcacaatcacgccatcgccggcgtcgccgtggctctcagacaggccacgacgccc
atgtttcgtgaatacgtcgctcaggttctgaagaactccaaggccatggccgacgcgctg
ctgaagaagggctacacgctggtctcgggaggaaccgataatcatctggttctgatggac
ctgaggcctcaggggatggacggagcgcgtgcggagcgggttctggagctggtgtccatc
acggccaacaagaacacctgtcccggagacaagagcgcgctgacgcccggcggcctgaga
ctcggaacccctgctctcacgtcccgccagttcaaggagtctgatttccagcaggtggtg
gatttcatcgatcagggcatcaagatcgctctggacgtcaagaagaagaccaaaaaactg
tcagatttcaagagtttcctgctggaggacgcagagacggcgtctcgtatcgctgatctg
cgcggtcgcgtggaggctttcgcccgtccgttccccatgcctggattccacgaccattaa
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