Labeo rohita (rohu): 127166944
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Entry
127166944 CDS
T09007
Symbol
stx3a
Name
(RefSeq) syntaxin-3
KO
K08486
syntaxin 1B/2/3
Organism
lroh
Labeo rohita (rohu)
Pathway
lroh04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
127166944 (stx3a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lroh04131
]
127166944 (stx3a)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
lroh04147
]
127166944 (stx3a)
Membrane trafficking [BR:
lroh04131
]
SNARE
Syntaxin (Qa)
Stx-PM
127166944 (stx3a)
Exosome [BR:
lroh04147
]
Exosomal proteins
Exosomal proteins of epithelial cells
127166944 (stx3a)
Exosomal proteins of other body fluids (saliva and urine)
127166944 (stx3a)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Syntaxin
SNARE
Syntaxin_2
DUF3540
FUSC
Baculo_PEP_C
FlaC_arch
Relaxase_C
Baculo_F
Spectrin_Anc-1
PI_PP_C
GNVR
Occludin_ELL
Nsp1_C
Motif
Other DBs
NCBI-GeneID:
127166944
NCBI-ProteinID:
XP_050968629
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All DBs
Position
1:22788527..22793897
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AA seq
285 aa
AA seq
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MKDRLEQLKAKSDQTPDDVEIPVENKEFMDEFFTQIEEIRTSIDKIDENVTEIKRLYSVI
LSAPTSEQKTQDELEAVTNEIKKLANNARNKLKSIEQSLASNTEERVSADMRIKKSQHAI
LAKKFVEVMTKYNEAQMEFRDKSKGRIQRQLEITGKATTDEELEEMLDGGNAAVFTAGIM
DSGISKQALSEIEARHKDIMRLESSIKELHDMFVDIAMLVENQGSMIDRIESNMDQSVGF
VERAVADTKKAAKFQQEARRKKMMIMLCCTILAVIGGSLVYSWLT
NT seq
858 nt
NT seq
+upstream
nt +downstream
nt
atgaaggaccgactggaacaactaaaagcgaagtcggatcaaactcctgatgatgtggaa
attccagtggaaaataaagaatttatggatgagttcttcactcagattgaagaaatccgc
accagcatagacaagattgatgaaaatgtaactgagataaagcgactgtattctgtcatc
ctctctgcacctacttcagaacagaagacacaggatgaattggaagcagttaccaatgag
ataaagaaactggctaacaatgctcgcaacaaactcaaaagcattgagcagagtttggca
tctaacactgaggagagggtttcagcagatatgcggataaagaaatctcagcatgccatt
cttgctaagaagtttgtagaggtgatgacgaaatacaatgaagcccaaatggagtttaga
gacaagagcaaagggcgtatccaaagacagctggagatcactggcaaagccactactgat
gaagagctggaggaaatgctggatggaggaaacgctgcagtattcacagcaggaattatg
gactctgggatatcaaaacaggcactaagtgagattgaggcacgacacaaagatattatg
cgactggagagcagcataaaagagttgcatgacatgtttgtggacattgcaatgctggtg
gagaatcagggaagcatgattgacaggattgagagcaacatggaccagtcggtgggtttt
gtggaaagagctgtggctgacactaaaaaggctgccaagttccaacaagaagcacgcagg
aagaaaatgatgatcatgctctgttgcacaattcttgcggtcatcggtggttctctggtg
tacagctggctgacataa
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