Labeo rohita (rohu): 127166984
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Entry
127166984 CDS
T09007
Symbol
usp43a
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 43a isoform X1
KO
K11856
ubiquitin carboxyl-terminal hydrolase 43 [EC:
3.4.19.12
]
Organism
lroh
Labeo rohita (rohu)
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
lroh01002
]
127166984 (usp43a)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lroh04121
]
127166984 (usp43a)
Enzymes [BR:
lroh01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
127166984 (usp43a)
Peptidases and inhibitors [BR:
lroh01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
127166984 (usp43a)
Ubiquitin system [BR:
lroh04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
127166984 (usp43a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
UCH_1
Ist1
Motif
Other DBs
NCBI-GeneID:
127166984
NCBI-ProteinID:
XP_050968684
LinkDB
All DBs
Position
6:complement(14558541..14654219)
Genome browser
AA seq
1157 aa
AA seq
DB search
MDTPRETRKQTIKAKSTTRKNKTHKSQKLFRRRSLKSLGNFMSRIIKTLGTLAHLGDADQ
PDAAEEDDGGFGDTLSAHNLNYRESSVRKTAAPSSSYGSVKDRLSWCYGEKTPGVQGLKN
HGNTCFMNAVVQCLSNTELLAEYLGLEQYKCELNERRINGMMKSEEVKGEVTEKLASLVR
ALWTLDYTPQLSVEFKSVVSKYGSQFKGNAQHDALEFLLWLLDCVHEDASLSINNNHSNK
AKPSSKGPVGLEESSCPGPANSQQPGTRHSFVQEHFQAQYRSSLTCPHCLKQSNTFDPFL
CISLPIPLRQTRALNVILVFTNEGKRFLRVGLAVPLFGSISTLRAMVAEEGKISPDQVIL
TEMNSNGFQRSFSDEDDITSISESDVIYAFQAPPLFTRGGSMRFSGFHHSLPSSPYTAEP
EGHRLPPSGTLSSEFLNQGGSSKILLLICNVAGSGQQTTRFGPPLMMRVERTLSWDHLQQ
SVCNKLYLFQKNTIIKTTELFRIRVVGGSASCSYLSPHDSRPLCHPTVDRALKLCGPGGP
LHVKLVIEWENRIKECLFGNIQEEVIEDAESVRIQQQNHVQQHNCTLDECFQLYTKEEQL
APDDAWKCPHCKQMQQGMVKMSLWTLPDILILHLKRFRQVGKRRNKLSTLIRFPVSGLDM
TPHVVKRSQSMKNLTPWPSTWKHGDTDFLYDLYAVCNHHGGMHGGHYTAYCRNSVDGHWY
SYDDSSVEVVPEEELCTRGAYILFYQRRNVIPPWSANSSVRGSTSSSMSDHWLIRLNGDS
KRGSMVSRSSTICPSSIPDSPESPVFLNEPSVEERVSLGGFESRPFVRGIQGRSVSMKSP
TKTRVLPLRWSFGNKDRRKPAQAPGQAPAELVEYLESGRRPRCTKDPIVALMTRPSDKED
DTKKPTAKSSSHSSLGPSEHLKTLQGQERSSSEKATGQKPSANSRPKEDGTLTRRSSRKS
KQESRKSSSAGIQSSPSGPSGWETTQRDDPGEEQDQLEEKQRKGQEIKRHDSVFAFLKGG
FIKKDSLRRSRDSESVKRGDDGVKSPSGVPLSNGTQNRTSEGKANSTNQVRSRPGGEVAN
GKVSRGSSDIKRSQSSSNIQSKADLGLRRTASLHRNGTTAAQPQSVPMDRGSQNTLQRTR
YSTNSLGRKKPVPESSF
NT seq
3474 nt
NT seq
+upstream
nt +downstream
nt
atggatacgccgagggaaaccaggaaacaaacaatcaaagccaaatcaaccacgcgcaag
aataagacacacaaatcccagaagctgttccgaaggagatcgctaaaatcccttggaaat
tttatgagcaggattatcaaaactttgggcactttggcacacttgggggacgcggaccag
ccggacgcggcggaggaggatgatggtggctttggagacactctgagcgcccacaacttg
aattacagagagagctcggtgaggaaaaccgctgcaccctcatctagttatggatctgtc
aaagacagactgtcctggtgctacggcgagaaaactccgggagttcagggtttgaagaac
cacggaaacacctgtttcatgaacgccgtggtgcagtgcttgagtaacacggaacttctg
gcggagtatttgggtctggagcagtataaatgtgaattaaatgagcggaggatcaacggg
atgatgaagagtgaggaggtcaagggggaggtgacggagaagctggcatcgctagtgagg
gcgctctggacgctcgattacacgcctcagctgtcagtggaatttaagagtgttgtgtcc
aagtatggctctcagttcaaggggaatgctcaacatgacgctttggagttcctgttgtgg
cttctggactgtgtgcatgaagatgccagcctctccatcaacaacaaccacagcaacaaa
gccaagccatccagcaagggtcctgtgggattggaggagagttcatgccctgggccagca
aactcacaacagcctggaactcgacacagtttcgtacaggagcacttccaagctcagtac
aggtcatcattgacgtgccctcattgccttaaacagagcaacacctttgaccctttcctg
tgtatttcactcccaatcccactgcgacagaccagggccctgaatgtgattctggtgttc
accaatgaaggtaaacggtttctgagagtagggttggctgtgcctctctttgggtctatc
tcaacactcagggccatggtagcagaggagggcaagatctctccagaccaggtgattttg
acagagatgaactcaaatgggttccagcgctctttctctgatgaagatgatataacgagt
atctccgagagtgatgtcatctatgccttccaggctccacccctcttcaccagaggaggc
tccatgcgattctcagggttccatcactccctcccttcctcgccatacacagcagagcct
gaaggtcacaggttaccaccctcagggacgttatcgtcagaattcttaaatcagggtggt
tcttcaaagatcctcctgctaatctgcaatgttgctggttctggccaacaaactacaagg
tttgggcctccattgatgatgagagtagaaaggactctttcttgggatcatctgcaacag
agtgtctgcaataagctttacttatttcaaaaaaatacaatcataaagactactgaactg
tttaggattcgagtggtgggtggatcggcttcctgcagttacctgtctccccacgacagc
agacctctgtgtcacccaaccgtggacagggccctgaaattatgcggtcctggtggtcct
ctgcatgtgaagcttgtgattgagtgggaaaatagaatcaaagagtgtctctttggtaac
attcaagaggaagttattgaggatgcagagagtgtgcgaatccagcagcagaatcatgta
cagcagcacaactgcacgctggatgagtgttttcagctctacaccaaagaggagcagctg
gcaccagatgatgcatggaagtgccctcactgtaagcagatgcagcaggggatggtgaag
atgagcttatggaccctgcctgacatcctcatcctgcacctcaagcgttttcggcaggtg
ggcaaacggcggaacaagctctccactctcattcgctttcctgtaagcggtctggatatg
actccccatgtggtgaaacgcagtcagagcatgaagaatctgactccgtggccttcaact
tggaaacatggagatactgacttcctatacgacctgtatgcagtctgtaaccaccatgga
ggcatgcatggaggccattacacagcctattgtaggaactcggtggatggccactggtac
agttatgatgacagcagtgtggaggttgtgcccgaggaggaactgtgcacacgaggggca
tatatcctgttctaccagagaagaaatgtcatcccaccctggtccgccaacagctcggtc
agaggttccaccagctcctcaatgtctgatcactggctgattcgtttgaatggtgacagt
aaaagaggaagcatggtatcacggtcttccacaatatgcccttcttccatcccagactcc
ccagaatctcccgtctttctaaatgaaccctcagtggaagagagagtttctttaggtggg
tttgaaagcagacctttcgtgcgaggaatccaaggccgtagcgtaagcatgaaaagtccc
accaagaccagggtgctcccactgcgatggtcctttggaaacaaagaccgccgcaaacct
gcgcaagctcccggccaggctcctgcagagctggttgagtacttggagtctggcagaagg
ccaagatgcaccaaagaccccatcgttgccctaatgactcgaccttcggataaagaagat
gatacgaaaaaacccacagccaaatcttcaagccacagcagcctcggaccttcagagcat
ctcaaaacactgcagggtcaagaaaggagtagctcagagaaagcaacgggccaaaaaccc
agcgccaacagtagaccaaaagaagatggaactttgaccagacggagcagcaggaaatca
aaacaggagtccagaaaaagctccagcgcagggatccaatccagtcccagcggtccaagc
gggtgggaaacaacacagagggatgatccaggtgaggagcaagaccaactggaggagaaa
cagagaaaaggacaggagataaaacgtcacgatagtgtctttgcttttcttaaaggcggt
ttcatcaaaaaagactcgcttcggagatctcgagacagtgaatctgtgaaaaggggtgat
gatggggttaagagcccatctggagttcctctctccaatgggacacaaaacagaacttcc
gaaggtaaagctaatagcactaatcaagttcgtagcagacccggtggcgaagttgcaaat
ggcaaggtgagtcgtgggtcatcagacatcaagcgctcacaaagttcttccaatattcaa
agcaaggctgatctaggcttaagaagaacggcgtctttacacaggaacggcacaacggcg
gcccagccacagagcgttcctatggacaggggctctcagaacaccctacaacgcacgcgc
tacagcacaaactcactgggcagaaagaagccagtgcctgaatcaagcttctga
DBGET
integrated database retrieval system
