Labeo rohita (rohu): 127166992
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Entry
127166992 CDS
T09007
Symbol
atf4a
Name
(RefSeq) cyclic AMP-dependent transcription factor ATF-4
KO
K04374
cyclic AMP-dependent transcription factor ATF-4
Organism
lroh
Labeo rohita (rohu)
Pathway
lroh04010
MAPK signaling pathway
lroh04137
Mitophagy - animal
lroh04141
Protein processing in endoplasmic reticulum
lroh04210
Apoptosis
lroh04261
Adrenergic signaling in cardiomyocytes
lroh04912
GnRH signaling pathway
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
127166992 (atf4a)
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
127166992 (atf4a)
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
127166992 (atf4a)
09143 Cell growth and death
04210 Apoptosis
127166992 (atf4a)
09150 Organismal Systems
09152 Endocrine system
04912 GnRH signaling pathway
127166992 (atf4a)
09153 Circulatory system
04261 Adrenergic signaling in cardiomyocytes
127166992 (atf4a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lroh03000
]
127166992 (atf4a)
Transcription factors [BR:
lroh03000
]
Eukaryotic type
Basic leucine zipper (bZIP)
AP-1(-like) components, CRE-BP/ATF
127166992 (atf4a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
bZIP_1
bZIP_2
GOLGA2L5
COG3_N
Nop53
UPF0242
MCU
DUF3450
AAA_13
Motif
Other DBs
NCBI-GeneID:
127166992
NCBI-ProteinID:
XP_050968696
LinkDB
All DBs
Position
6:complement(298853..302465)
Genome browser
AA seq
379 aa
AA seq
DB search
MSVVSQMCLEDMGALFLGSSSLMADPFGPLLDEDEESALSEGSSSPLSSSYAESSSSFSP
LSPSCPASVGFKSELLSLSWPPASALLTAQSETEQSKGDAFSGMDWMTEKLDLNDFDLDS
LIGSCDSEEPPSSPEELLACLDTDMDLDLDSLPFGSSELGLPLPPLPLDLPLPEAADGPQ
EPVEIKSEPPSPAQSPDPTYTLELGSEVSVLQSAEIMLTPSHIVLLLAPKEEAIGGDSSD
SDSGISVSGSPPHRPDPEPSPKPAGSSRTKPYSKPDPDAATAVTSRVKAAPGTPKVVEKK
LKKMEQNKTAATRYRQKKRAEQETLSSECSDLEKRNRELKEKAESISREIQYLKDLMEEV
RSAKNRRSKAKAQDAVSSG
NT seq
1140 nt
NT seq
+upstream
nt +downstream
nt
atgtccgtggtgtctcagatgtgtttggaggatatgggggccctgttcctggggtcctca
tctctgatggctgacccctttgggccccttctggacgaagatgaggagagcgctctatcg
gaggggtcgtcgtcgcccctctcctcttcctacgctgaatcttcctcctctttctcgccc
ctctctccctcttgtcctgcttctgtagggtttaagtcagagctgctgtcgctctcctgg
ccgcctgcgtctgcgctgctcaccgcgcaatcggagaccgagcagagcaaaggcgatgcg
ttttctggcatggattggatgacggagaagttagacctgaatgactttgacctggattct
ctcattggatcgtgtgattcagaagagcctcccagttccccggaagagctgctggcctgc
ctggacaccgacatggatctggacctggattcgctcccgttcggctcgtcggagctgggt
ctgccgcttcctcctctgccccttgaccttcccctcccggaggcggcggacgggccgcag
gagcccgtggagatcaagtctgagcctccgtctccggcgcagtctccagatccgacctac
actctggagctgggcagcgaggtgtccgtgctccagtccgccgaaatcatgctgactccg
tcccacatcgtgctcctgttggctcccaaagaggaggcgatcggcggcgattcatccgac
agcgacagcgggatctccgtctccggatcgccgcctcacagaccggatcccgaaccctcg
ccgaagcccgcgggctcctccagaacaaaaccgtactccaaacccgacccggacgccgcg
acggccgtcacgagccgcgtgaaggccgcgcccggcactcccaaagtggtggagaagaaa
ctgaagaagatggagcagaacaaaacggcagcgacgcggtaccgccagaagaaacgcgcc
gagcaggagacgctgagctccgagtgctccgatctggagaagaggaaccgcgagctcaag
gagaaagccgagtccatcagccgggagatccagtacctgaaagatctcatggaggaagtt
cggtccgcgaaaaaccgcaggagcaaagcaaaagcccaggatgccgtcagctctggttag
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