Labeo rohita (rohu): 127167009
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Entry
127167009 CDS
T09007
Symbol
sox21a
Name
(RefSeq) transcription factor Sox-21-A
KO
K09267
transcription factor SOX1/3/14/21 (SOX group B)
Organism
lroh
Labeo rohita (rohu)
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lroh03000
]
127167009 (sox21a)
Transcription factors [BR:
lroh03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
127167009 (sox21a)
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GFIT
Motif
Pfam:
HMG_box
HMG_box_2
HMG_WDHD1
SOXp
Motif
Other DBs
NCBI-GeneID:
127167009
NCBI-ProteinID:
XP_050968732
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All DBs
Position
6:5949317..5950438
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AA seq
238 aa
AA seq
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MAKPMDHVKRPMNAFMVWSRAQRRKMALDNPKMHNSEISKRLGGEWKLLSDSEKRPFIDE
AKRLRAVHMKEHPDYKYRPRRKPKNLIKKDRYHFNVTYNLGDSDPLKSARLPGDALTDSL
SAEKTSVAAATRVFFSHHLSASPYPFLDLTSKVSELPPAPFPHYSMLGYPGGVSAFPGMG
VLAGAPHAHPSPGNPGHMLPYNCLGWPGSGPAVPSSYVLLPGMTKAQHEPYLTYAATI
NT seq
717 nt
NT seq
+upstream
nt +downstream
nt
atggcaaagcctatggaccatgttaaacgtcccatgaacgcttttatggtgtggtcgaga
gcccagagacggaaaatggcactggacaacccgaagatgcacaactctgagatcagcaaa
cgccttggcggtgaatggaaactcctgtcggactctgaaaaaagaccttttattgacgag
gccaaacgccttagagccgttcacatgaaagaacacccggattacaaatacagaccgcgg
cgaaagcccaaaaacttgattaaaaaagaccggtatcattttaatgtgacgtacaatctg
ggtgacagcgacccgttgaaaagtgcgcgtctacccggtgacgcactcacggactcgctg
agcgcggagaaaacgtcggtcgccgctgctactcgggtgtttttcagtcaccacctgtcc
gccagcccatatccgtttctcgacctcacctccaaagtttcggaattaccccctgcgcct
ttcccacattactcaatgctcgggtatcctggtggagtctccgcgtttcccgggatgggg
gttctggccggtgcgccacacgctcacccgtctccgggtaacccgggccacatgttgccc
tataactgcctgggctggccgggttctggacctgctgttccttcctcttacgtgctttta
ccaggaatgaccaaagctcaacatgaaccttatctgacgtacgctgcgacgatatga
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