Labeo rohita (rohu): 127167045
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Entry
127167045 CDS
T09007
Symbol
obsl1a
Name
(RefSeq) obscurin-like protein 1a isoform X1
KO
K19574
obscurin-like protein 1
Organism
lroh
Labeo rohita (rohu)
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
lroh03036
]
127167045 (obsl1a)
Chromosome and associated proteins [BR:
lroh03036
]
Eukaryotic type
Centrosome formation proteins
3M complex
127167045 (obsl1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
I-set
Ig_3
ig
Ig_2
V-set
Ig_4
Izumo-Ig
V-set_CD47
Receptor_2B4
VEGFR-1-like_Ig-like
fn3
Tissue_fac
DUF1203
Motif
Other DBs
NCBI-GeneID:
127167045
NCBI-ProteinID:
XP_050968810
LinkDB
All DBs
Position
6:complement(11489859..11509315)
Genome browser
AA seq
2183 aa
AA seq
DB search
MDVFGGAPRVLGYPRPVLVKCGTDAALKCQIGGDPQPDVIWERKNESILPEGRYRITQDG
KVYTLYISGVTMEDAGQYICRAKNNIGETYAAATLKVEEEPQELQQTQPAPPPQQQNEVK
VIPPEQEIKVMNQQQDEVVQKADPFQDNKPRFLIKPLSLRVDRGEDAAFSCKLSGDPLPQ
VVWEKDGKQLNEIYESSHYHVGQQDGGWFQLKVFRTRAPDGGVYMCKAVNKYGEVMTGAV
LLVEPIPEQREGSKTNGYTNGHYSPHQSRSKHSKEPHLNVSKAKKFTVTEGKHAKFRCYV
TGKPKPEIVWKKDGENIVPGRRFLIFEDREGYYTLKVLYCKQQDTGLYICAASNALGNTL
SAVQLSVKGPPVRFKRALQDAEVRERNVAVLECEVPEESISTAWYLEDQRLQPGNKYNME
QKGTRRRLTIQNVGADDDGVYLCEMPDGGKTIAELAVKGTIVKKLPRRLEVMEGENAAFF
VEVEQDEMDICWFKDGLQLQETHQTIIKSFGKTHILVFVNTSYQDSGTITFMAGRSTTSS
KLRVKTARHCPPICPVSVQMNTDCSNGAILSWSPSPNLQNSTKSVYVLERQEVGSQEWQR
CLTTETGTSAEVLGDSVPCEGDYRFRICCVNKYGRSGHVEFPKVVHLVPGPKIKTPLKNT
VATEGEDAVFSIELSANLIGTWFLNSQQLQNSGRFSITQSQNQHIFRIHQVPNVYDGAEI
TFIATGVRDSATLQIKAPEMKFLPMSEMDTNKTTEVGNPIVLYCEVSHPTANVQWFKDGQ
ELHVEEGLNIQSDGNMRRIVIQSAEYFHSGVYTCQSNNDVVTFNVNVEAPPVSFKEIKQE
ERQKSAMELDPVVLTCELSRPDAPAYWFKDGVAVLQSDNITIQSEGTLKRLIIRSAALAD
AGTYICQAGDQTMSFSVNIKEPPVTIVDPKDDIHMERHLSEEVVLNCELSRSNGEAHWFK
DGLKLQESENVRLSAEGPYRRVTILCASKRDSGEYVCDSGGDSVFFQLIITEAPVRIVSP
RESEVDVCILSSERLVLSCEISKADAEVCWFCDGMEVEENDNLKLEDDGIYRRLVIPCAT
IDDSAEYVCETADDSVTFWVKVEEPPVKLSCSKETGSITENFAGKPVVLELEVSRDNAEV
CWMKDGVKVEESSNITITENGLTRKLTIHFPTLNDSGIYTCNAMDDTLDFKVKITEAPVK
ILNRDQIKSEHKVALYDDVVLECELSTPNGVVNWYKNGSPIEENERFCFEEEGAFRTLVI
LCAELQDSGEYVLDAKDDSISFHVTVQEPSVKIIGNSGDPDYQEMVTGDDLILSCEVSRA
SAPVKWLFNDKPLVPDERTDIESNGTLRKLTLSNIVLSDSGKYMCDAVDDQMITIVKVQE
PPVEFLNKEEVNLVTGYEAEAVTLTAMVSRPNAIVRWLKDWTPVSDERFHIASLGLTRTF
TINPLKKLDSGEYTCDANTDEMHFSLLVKDMRIKFVKPLFDSVAHKDGMVTLCCEVCKTK
ADVQWKKDGVEIIPSRRFSIRANGTERSLTIHRLTKEDAGEYACETKDDCTSAKLRVELP
RVVEFLTELHNTTVMEGEDATFKCVVSPDDVQLVWLMDGEPIKPSERFHIEQNSLCHTLV
IRKVQLLDSSRITAEAEGIISKASLKVQEAQVLFTKRMEAVMAEEFGEAILETEVSLESG
EVQWMRQGVVIQPGPRHKLAQNGCKRTLTITNLNLSDRGTYRCETLHDRTQVKLNVEPRK
IVIRKGLMDIETFERETASFEVELSHADVEGVWQKDGLRIKPNNNWRVSCNGRVHGLTLS
NLNLEDTGSIIFSAEGLRTTARLVVKETPVTIIKKLSDVRFEEESAVILECELSRPNVDV
RWLKNGLELKSSKTLRIYSMGHKRCLQILECSTSDSGLYTCEIGDLSTSCKLEIYEHELE
IITGLEDLWIKEDQNAVFMCELSMEDMPGEWYKNGSRIRPTSTIKTRTEGTKHFLLICNV
KPEDSGEIKFISKQVESVAYLEVEELPVSIVRPLRDRTALEKHRVILECTVSSTNCDVTW
YKGDQELESTEHMDIIQDGCYHKLVIHQVALEDEGTYSIEVGEHTSTAKLMVEAQSILVV
KDIEDVEVRATETACFQCEVSVILIKPPTWTLNGETLQSGPNIRIENQATVHKLTIKKTS
ADMSGTLKFTTGKAKTSAKLTVL
NT seq
6552 nt
NT seq
+upstream
nt +downstream
nt
atggatgtttttggaggtgctccacgtgtgcttggttaccctcgcccagttctggtgaaa
tgtggaacagatgctgctcttaaatgtcagattggtggagatccccaaccagatgtgatc
tgggagcgtaaaaatgagtctattcttcctgagggtcgttaccgtattactcaagatggc
aaggtatacaccctttacatctctggtgtgacaatggaagatgctggtcagtatatttgc
agagctaaaaacaacattggggaaacatatgcagctgctacccttaaagtggaagaagag
cctcaagagctccagcaaacacaaccagccccaccaccacaacaacaaaatgaagtaaaa
gtgattccaccagaacaagaaatcaaagttatgaatcaacaacaggatgaggtggtacag
aaagcagacccattccaagacaacaagcctcgttttctgatcaaacctctttctctgaga
gttgaccgtggagaagatgctgccttctcctgtaagctgtcaggcgatcctttacctcag
gtggtttgggagaaagatggtaaacagctgaatgagatctatgaaagttcccactaccat
gtgggccagcaagatggtggctggttccagctgaaggttttcagaacgagagccccagat
ggaggtgtttacatgtgcaaagcagtcaataagtatggagaagtgatgactggagctgtg
ctcctggtagagcccattccagaacaaagagagggaagcaagacaaatggttacaccaat
ggccattactcaccacaccaatcgaggtccaaacactcaaaagagcctcacttgaatgtg
tcgaaggctaagaaattcactgtcacagaaggcaaacatgccaaattccgttgctatgtc
acaggaaagcctaaaccagagattgtatggaagaaagatggagagaatattgtgccgggc
cgacgatttctcatttttgaggatagagaggggtattacaccctgaaagtactgtactgt
aagcagcaggatacaggactctacatatgtgctgcctcaaatgcactgggaaacacactg
agtgctgtgcaactgtctgttaaagggcctccagtccgatttaagcgagctcttcaagat
gcagaggttagggagaggaatgttgctgttctggaatgtgaggttccagaagagtccatt
tccacggcatggtacctggaggatcagaggctgcagccaggaaataagtacaacatggaa
caaaagggaacacggagaagactaaccatacaaaatgttggggcagatgatgatggagtt
tacctctgcgagatgcctgatggtggaaagacaattgcagaattggcagttaaaggtaca
attgtgaagaaacttccacggaggttagaggtaatggaaggagagaatgcagcattcttt
gtggaagtggaacaagatgagatggatatctgctggtttaaagatgggctgcagttgcaa
gaaacacatcaaaccattattaagtcttttggcaagacccacatcctggtctttgtcaat
acatcatatcaagattcaggcacgatcacctttatggcaggcagatcaacgacaagctcc
aaactcagggtcaaaactgctcgacactgcccacccatctgtcctgtgagtgtccaaatg
aatactgactgttcaaatggtgccatcctttcctggtcaccatcacctaacttgcaaaac
tccactaagtcagtgtatgtgctagaacgtcaggaagtgggctctcaggagtggcagcga
tgcctgacaacagagacgggcacttctgctgaggtcctgggtgatagcgtgccatgtgag
ggtgattaccgtttccgtatctgctgtgttaacaaatatggcagaagtggacatgtggag
ttccccaaagtagtacatctggtcccaggtccaaagatcaaaacccctctgaagaatact
gtggcgactgagggtgaggatgctgtgttctccattgagctctctgctaatttgattggt
acgtggttcctgaatagccagcagctgcagaatagtggacgcttctccatcactcagtca
cagaaccaacacattttcagaatccaccaagtgcctaatgtgtacgatggagctgaaatt
actttcattgccactggcgtacgagattcagcaacactacagattaaagcacctgaaatg
aaattcttaccaatgtcagagatggacaccaacaagaccactgaggtgggaaatcccatt
gtgctgtactgtgaggtgtcacatcccacagccaacgttcaatggtttaaagacggacag
gagctacatgtagaggagggtctaaatattcaatcagatggcaacatgaggaggatcgtc
attcagtcagcggagtactttcattctggtgtctacacctgccaatcaaacaacgacgta
gtcacatttaatgtaaatgtcgaagccccgcctgtgtcatttaaagagattaagcaggaa
gagaggcagaaaagtgctatggaactggaccctgtggtcttgacgtgtgaactctcccga
ccagatgcacctgcctactggtttaaagatggagttgcggtccttcagtcagacaacatt
accatccagtctgaaggcaccttgaaaagacttataatccgttcagcagcgcttgcagat
gctgggacatatatttgccaagcaggcgaccaaaccatgtcattttctgtcaacataaaa
gaacctccggttacaattgtggacccaaaagatgacatccacatggagcgtcatctctct
gaggaggtagtcctgaactgtgagctctctcgatcaaatggagaagctcactggtttaaa
gatggcctaaagctccaggagagtgagaatgtccgactcagtgctgaaggcccgtacagg
agggtaacaattctctgtgcttccaaacgggattctggagagtatgtatgcgactcaggc
ggcgactcagtattctttcagctcattattacggaggctccagtccgtattgtgtccccc
agagagtcagaggtagatgtgtgtatactgagctctgagaggctggtcctgagctgtgag
atctccaaagcagatgcagaagtctgctggttttgtgatggcatggaggtggaagagaat
gataacttgaaactggaagatgatgggatttaccgcaggctggtgattccctgtgccacc
attgatgattctgcagaatatgtatgcgagactgcagatgactctgtcacattttgggtg
aaagtagaagagcctcctgttaaactttcttgctccaaggagacaggcagcattacagag
aattttgctggtaaacctgtagtcctagagcttgaagtgtcccgtgataatgcagaggtg
tgctggatgaaagatggagtgaaggtggaagagagcagcaacattacaattactgaaaat
ggcctcacacgcaagcttacaatccattttccaactctaaatgattctggaatatatacc
tgcaatgccatggatgacacattggattttaaagtcaaaattactgaggcaccggtaaaa
atcctgaatagagatcagatcaagagcgagcacaaggttgcgttatatgatgacgttgta
ttggagtgtgagctgtccacaccgaatggtgtagtcaattggtataaaaatggaagtcct
attgaggagaatgaacgcttctgttttgaggaggaaggtgccttcagaacactagtcatt
ctctgtgcagagctgcaggactctggagaatatgttcttgatgctaaagatgattcgatt
tcatttcatgtcacagtacaagagccatcggtgaagatcattggcaactctggtgatcct
gattatcaggagatggtgacaggagatgatctcatcttatcttgtgaggtttctcgagcc
agtgcaccagttaagtggctattcaatgataagccattggtccctgatgagcgtacggat
attgaaagcaatggaacactccggaaactgactttatccaacatcgtcctttctgactct
gggaaatacatgtgtgatgctgttgatgaccaaatgataaccattgttaaagttcaagag
cctcctgtagagttcctcaacaaagaagaggtaaatttagtcactggttatgaagcagag
gctgttactctgactgccatggtttcaagacccaatgcaatagtgcgatggcttaaagac
tggactccagtcagtgatgaacgtttccacatagccagcctgggcctgacccgcactttc
accatcaacccgttaaagaaacttgacagtggagagtacacatgtgatgcaaacacagat
gagatgcacttcagcctcttagtcaaagacatgcgtattaaatttgtgaagccactgttt
gactcagtggcccataaagatggtatggtcacactttgctgtgaggtatgcaagaccaaa
gcagatgtccagtggaagaaggatggagtggagatcattcccagtcgtcgcttctccatc
cgtgccaatgggacagagaggagtctcacaatccatcgtctcaccaaagaagacgctgga
gagtatgcttgtgagaccaaagatgactgtaccagcgccaaattaagggtagaattgccc
cgtgtggtggaattcctcacagagcttcacaataccacagtcatggagggtgaggatgct
acctttaagtgtgtggtctcacctgatgatgttcagttggtctggctcatggatggagaa
cccatcaaacccagtgaacgcttccatattgaacagaacagcctctgccatactctggta
atccggaaggtccagctcctggattcgtcccggatcactgcagaggctgagggtataatt
tctaaagccagcctcaaggtccaggaggcgcaggtgttgttcacaaagagaatggaggca
gtgatggctgaggagtttggagaggcaatattggagacagaagtgagtctggagtctgga
gaagtgcagtggatgagacagggggtggtgatccagccaggaccaagacataaactcgcc
cagaatggctgcaaacgcactttgaccatcactaacctcaacttgtctgatcggggaact
taccgctgtgagactctccatgaccgtacacaggtcaaactcaatgtggagccgaggaag
attgtcatacgcaagggtctgatggacattgagacatttgagagagagacggcatctttc
gaggtggaactttctcatgccgatgtagagggtgtgtggcaaaaagatggtctgcgtatc
aaacccaataacaactggcgtgttagttgcaatggacgagtacatggtctcaccctctcc
aacctcaacttggaggataccggtagcattatcttttctgcagaaggtctgagaactact
gccagactggtagtcaaagaaacaccagtaacaatcattaagaagctgtccgatgtgagg
tttgaggaggaatctgcagtgattttggagtgtgagttgtctaggccaaatgtggatgtc
agatggctaaagaatggcttggagctgaaatccagtaagactttgaggatttattccatg
ggacataaacgctgtttacagatcttggaatgcagcaccagtgactcaggcctttatact
tgtgaaataggtgacctcagcacttcctgtaaacttgagatctatgaacatgaattagag
atcataactggcttggaggatctttggatcaaggaggaccagaatgctgtctttatgtgc
gagctctcaatggaagatatgcctggggaatggtacaaaaatggcagcaggatacgcccc
acatcgactatcaagactcgaacagagggcacaaagcacttcctgcttatatgcaacgtc
aagccagaggattctggtgaaatcaagtttatttccaaacaagtggagtcagttgcttat
cttgaggttgaagagcttcctgtaagcattgtccgtccccttagggatcgtacagcactg
gaaaaacatcgagtcattctagaatgcactgtatcatccacaaattgtgatgtcacctgg
tacaaaggggatcaagagttggaatccacagaacacatggacatcatacaagacggctgt
tatcataaactagtcatccaccaggtggcgctggaagatgagggaacctacagtattgaa
gttggggagcacacatccacagccaagctgatggtcgaggcccagtctattctagtggtg
aaagatatagaggacgttgaagtgagagctactgaaacagcttgcttccagtgtgaagtg
tccgtgatcctcatcaagcctcccacctggactctgaacggggagaccctgcagtcaggg
cccaatatccgaatagagaaccaagcgactgtacacaaactgacaatcaaaaaaaccagc
gctgacatgagtgggacactcaagtttaccacagggaaagccaagactagtgccaaactg
acagtgctgtag
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integrated database retrieval system
