Labeo rohita (rohu): 127167176
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Entry
127167176 CDS
T09007
Symbol
ccdc174
Name
(RefSeq) coiled-coil domain-containing protein 174
KO
K25178
coiled-coil domain-containing protein 174
Organism
lroh
Labeo rohita (rohu)
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lroh03019
]
127167176 (ccdc174)
03041 Spliceosome [BR:
lroh03041
]
127167176 (ccdc174)
Messenger RNA biogenesis [BR:
lroh03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
127167176 (ccdc174)
Spliceosome [BR:
lroh03041
]
Complex C
Other components
EJC/TREX
127167176 (ccdc174)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4078
ivWA
Motif
Other DBs
NCBI-GeneID:
127167176
NCBI-ProteinID:
XP_050969002
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All DBs
Position
6:complement(25280083..25283534)
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AA seq
463 aa
AA seq
DB search
MDKKKKPYSVTASSLVDLKAELYRKQEQFKHDRLGQDAGAAQKSKAKIKKPNVWSKQNEG
VNVRAQKDVQQTAEEENTLDKSRQKLEEKARLYEQMTKGDFPDEETESLFLVDFTQKIIN
QRNEPQTRIANIAGDRDGEDSDVNIPVPPPQNANEEWVDYVDALGRSRRCLRKDLPNFQK
MDQEFQNKRVTGADRTLLSEDMRREMQREQWEREEEEQMKKPVGPIHYENIREQEARELG
VGYFAFAQDEDQRRKQRETLDMLRDQTTDQRHKREQLKEKRKALLDARLAKVRMRRMKKS
KLEPGDEEEAAPDVAEKEEDDDEDLVGPPAPPTVRKVEVEIQERKDTKPGVPHVREWDRG
KEFSWGQWTSRRREERDSEFAPPSAYYTDDTRASYSRATDKGQSKGKLAFKWSETQMSTE
RDTENISTMRQPSDIPTYAQPSQPQTAQTQSLDDLLSYYKHST
NT seq
1392 nt
NT seq
+upstream
nt +downstream
nt
atggataaaaagaagaaaccatacagtgtcacagcgtcatcgctggttgatttgaaagcc
gaattatatcggaaacaggaacaatttaagcacgaccgacttggccaggacgcaggagct
gctcagaagtctaaggcaaaaataaaaaagcctaatgtctggagcaaacagaatgaagga
gtcaatgtacgagcacagaaggacgttcagcaaactgcagaggaagaaaacacacttgat
aaatccaggcagaaattggaggaaaaggcacgtctttatgaacagatgactaaaggagat
ttcccagatgaggagactgaaagtcttttcctggtggacttcacccaaaagattatcaac
cagaggaatgaacctcagacgcgcattgcgaatatagcaggggaccgagatggagaggac
tctgatgtgaacatccctgttccacctccacagaacgcaaatgaagaatgggtggactat
gtcgatgcattaggacgttctcgaagatgtctgaggaaagacctacccaattttcagaaa
atggaccaagaatttcagaacaagagggtgactggagctgataggacactgttatctgag
gacatgaggagagaaatgcagagagagcagtgggagagagaggaagaggagcagatgaaa
aaacctgttggacccattcactatgaaaatatcagagagcaagaggccagggagctgggt
gttggttactttgcttttgcccaggatgaggaccaacgaagaaaacaaagagaaactcta
gacatgctgagagaccagaccacagatcagcgccacaaacgtgagcaactgaaggagaag
cggaaagctctgcttgatgctcgacttgctaaagtgaggatgaggaggatgaagaaaagc
aagctggagccaggcgatgaagaagaagctgctcctgatgttgctgagaaagaagaagat
gatgatgaagatttggttggacctccagctcctccaacagtgcggaaagtagaggtggag
attcaagagagaaaagacaccaaacctggcgttccacatgtaagagagtgggacagaggc
aaagagttctcctggggtcagtggaccagtcggcgtcgagaagagcgggactcagagttt
gctcctccttctgcttattacacagatgacacaagagccagttacagcagagccacagac
aaagggcagagcaaaggaaaacttgccttcaagtggtctgaaacccaaatgtccacagaa
cgagacacagagaacatatctactatgagacaaccttctgacatacccacatatgcacaa
ccttctcaaccacagactgctcaaacacagagtctggacgacctgttatcgtactacaaa
cactccacgtga
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