Labeo rohita (rohu): 127167185
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Entry
127167185 CDS
T09007
Symbol
vhl
Name
(RefSeq) von Hippel-Lindau disease tumor suppressor
KO
K03871
von Hippel-Lindau disease tumor supressor
Organism
lroh
Labeo rohita (rohu)
Pathway
lroh04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
127167185 (vhl)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lroh04121
]
127167185 (vhl)
Ubiquitin system [BR:
lroh04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul2 complex
Target recognizing subunit
127167185 (vhl)
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Gene cluster
GFIT
Motif
Pfam:
VHL
VHL_C
Motif
Other DBs
NCBI-GeneID:
127167185
NCBI-ProteinID:
XP_050969014
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Position
6:complement(25294491..25298433)
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AA seq
172 aa
AA seq
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MMPQEPPEGQSLPLVRSLVSRIPVEVVFCNCSPRVVKPVWINFRGEPQPYVDIQPYTGRK
MKTFVGHPWMFRDAETDDPMVVNNKEMYLPAPHENGQVSFANITLPVLTLRDRCLQVVRR
LVRREDICQLEIARCLQDDLAQRPSIHTDLQRISRRVEQKLLENREQQNVKM
NT seq
519 nt
NT seq
+upstream
nt +downstream
nt
atgatgcctcaggaacctccggaggggcaatcgctgccgctggtccgatctctggttagc
cggataccagtcgaagtggtgttctgtaactgcagtccgcgcgtcgtcaagcccgtctgg
atcaacttccgcggggagccgcagccatacgtagatattcagccgtacaccggacgaaaa
atgaaaacttttgtggggcatccatggatgtttcgggatgcagaaactgatgatccaatg
gtagtcaataataaagagatgtatttgccagccccgcatgaaaatggacaagtctcattt
gccaacatcacactgcctgtgctgaccttgcgagatcgctgtctgcaagttgtgaggcgg
ttggttcgcagagaagatatctgtcagttggagattgcacgctgcctacaagatgacctt
gctcagagacccagcattcacactgatctacaacgcattagtcggcgggtggaacagaag
ttactggagaacagagaacagcaaaacgtgaaaatgtga
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