KEGG   Labeo rohita (rohu): 127167192
Entry
127167192         CDS       T09007                                 
Symbol
cul4a
Name
(RefSeq) cullin-4A
  KO
K10609  cullin 4
Organism
lroh  Labeo rohita (rohu)
Pathway
lroh03420  Nucleotide excision repair
lroh04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:lroh00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    127167192 (cul4a)
  09124 Replication and repair
   03420 Nucleotide excision repair
    127167192 (cul4a)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:lroh04121]
    127167192 (cul4a)
   03400 DNA repair and recombination proteins [BR:lroh03400]
    127167192 (cul4a)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:lroh04147]
    127167192 (cul4a)
Ubiquitin system [BR:lroh04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul4 complex
    Cullin
     127167192 (cul4a)
DNA repair and recombination proteins [BR:lroh03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Cul4-DDB2 complex
      127167192 (cul4a)
    TCR (transcription coupled repair) factors
     Cul4-CSA complex
      127167192 (cul4a)
Exosome [BR:lroh04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   127167192 (cul4a)
SSDB
Motif
Pfam: Cullin Cullin_Nedd8
Other DBs
NCBI-GeneID: 127167192
NCBI-ProteinID: XP_050969026
LinkDB
Position
1:complement(50073172..50088269)
AA seq 745 aa
MMAEDIQHSQKSNFNGLTKSAKAGASKKLVIKNFKDRPKLTDSYTEDTWMKLRDAVSAIQ
NSTSIKYNLEELYQAVENLCSYKVSPMLYKQLRQVCEDHVRAQIHQFREESLDSLSFLKR
MNRCWQDHCRQTIMIRSIFLFLDRTYVLQNSLLPSIWDTGLELFRTHIISDGAVQSRTVE
GILEQIERERNGETVDRSLLRSLLGMLSDLQVYKDSFEQRFLMETNRLYAAEGQRLMQER
DVPEYLHHVARRLEEENDRVISYLDLSTQKPLIATVEKQLLGEHMNAILQKGLRMLLDEN
RVCELTLLYELFSKVKGGLTALLQAWREYIKSFGGEIVSSPERDKEMVQELLDFKDKMDH
VTQRCFQRNDSFINAMKEAFESFINKRPNKPAELIAKYVDSKLRAGNKEATEEELERILD
KIMIIFRFIHGKDVFEAFYKKDLAKRLLVGKSASVDAEKSMLSKLKHECGAAFTSKLEGM
FKDMELSKDIMIQFKQYMQNQSDPSNIELTVNILTMGYWPSYTPMDVHLPAEMVKLQEVF
KLFYLGKHSGRKLQWQPTLGHAVLKTEFKEGKKELQVSLFQTLVLLMFNESDECSVEEIR
AATGIEDGELKRTLQSLACGKARVLNKTPRGKDVEDGDRFHFNSDFRHKLFRIKINQIQM
KETVEEQVSTTERVFQDRQYQIDAAVVRIMKMRKTLSHNLLVSELYNQLKFPVKPADLKK
RIESLIDRDYMERDKENPNQYHYVA
NT seq 2238 nt   +upstreamnt  +downstreamnt
atgatggcggaagacattcagcacagtcagaaatcaaactttaatggactcaccaaatca
gccaaagcaggagcgtcgaagaaactcgtcataaagaactttaaagacagaccgaagctg
acagactcgtacactgaagacacgtggatgaagctcagagatgcagtcagcgccatccag
aacagcacctccatcaaatataacctggaggagctttaccaggccgtggagaatctgtgc
tcctataaagtgtcgcccatgctgtacaagcagctgcgtcaagtgtgtgaggatcacgtt
cgagctcagatccatcagttcagagaagagtcgctggacagcctgtctttcctgaagagg
atgaaccgctgctggcaggaccactgcagacaaacgatcatgatccgcagcatcttcctc
ttcctggaccggacgtacgtcctccagaactcactgctgccgtccatctgggacacgggt
ctggagttgttccggactcacatcataagcgacggagcggttcagagccggacggtggag
ggaatcctggagcagatcgagcgcgagcgtaacggagagacggtggaccgcagtctgctg
aggagcttactgggcatgctctcagacctgcaggtgtataaggactcgttcgagcagcgc
ttcttaatggagacgaaccgtctgtacgcggccgagggtcagagactcatgcaggagaga
gacgttcctgagtatcttcatcacgtggcgcggcgtctggaggaagagaacgaccgcgtc
atcagttacctggatctgagcacacagaagccgctcatcgccacagtggagaagcagctg
ctgggagaacacatgaacgccattctgcagaaaggtctgcggatgctgctggatgagaac
cgtgtgtgtgagctgacgctgctctatgagctcttcagtaaagtcaaaggagggctgacg
gcgctgctgcaggcctggagagaatacattaagagtttcggcggagagatcgtgagttct
ccagagagagataaagagatggttcaggagctgctggactttaaggacaagatggatcac
gtgacgcagcgctgcttccagaggaacgacagcttcatcaacgccatgaaggaggccttc
gagagcttcatcaacaagagacccaacaaacccgccgagctcatcgcgaagtatgtggac
tctaaactgcgagctggaaataaggaggccacagaggaggagctggagaggattctggac
aagatcatgatcatcttccgcttcatccacgggaaggacgtgttcgaggccttctataag
aaggatctggccaagcgtctgctggtgggcaagagcgcctcggtggatgcggagaagtcc
atgctgtccaaactcaaacacgagtgtggagcagcgttcaccagtaaactagaggggatg
ttcaaagacatggagctctccaaagacatcatgatccagttcaaacagtacatgcagaac
cagagtgatcccagcaacatcgagctgaccgtcaacatcctgacgatgggctactggccc
tcatacacaccgatggacgtccatctgcccgctgagatggtgaagcttcaggaagtgttt
aagctcttctatctggggaagcacagcgggcggaaactgcagtggcagcccacactgggt
catgcagtgctgaagactgaatttaaagagggtaagaaggagctgcaggtgtctctgttt
cagactctcgtcctgctgatgttcaatgagagtgatgagtgttcggtggaggagatccgt
gcggcaacaggcatcgaggacggtgagctcaagcgcacgcttcagtctctggcgtgtggg
aaagcacgagtgctcaataaaacgccgcgcgggaaggacgtggaggacggcgaccgcttc
catttcaacagcgacttcagacacaaactcttccgtatcaaaatcaaccagatccagatg
aaggagacggtggaggagcaggtgagcacgacggagcgcgtgtttcaggaccgtcagtat
cagatcgacgcggcggtggtgaggatcatgaagatgaggaagactctgagccacaacctg
ctggtgtctgaactctacaaccagctcaagttccccgtcaagccggcagatctgaagaag
cgcatcgagtcgctgatcgaccgcgattatatggagcgcgacaaagaaaaccccaaccag
taccactatgtggcgtga

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