Labeo rohita (rohu): 127167237
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Entry
127167237 CDS
T09007
Symbol
gga3a
Name
(RefSeq) ADP-ribosylation factor-binding protein GGA3a isoform X1
KO
K12404
ADP-ribosylation factor-binding protein GGA
Organism
lroh
Labeo rohita (rohu)
Pathway
lroh04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
127167237 (gga3a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lroh04131
]
127167237 (gga3a)
Membrane trafficking [BR:
lroh04131
]
Endosome - Golgi transport
Others
GGA
127167237 (gga3a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VHS
Alpha_adaptinC2
GAT
GGA_N-GAT
DUF2096_N
DUF1722
UPF0242
Sec20
DASH_Dad4
VCIP135_N
Csm1_N
Motif
Other DBs
NCBI-GeneID:
127167237
NCBI-ProteinID:
XP_050969107
LinkDB
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Position
6:complement(14498012..14508257)
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AA seq
687 aa
AA seq
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MADPEGESLESWLNKATNPSNRQEEWEYIIGFCDQINKELEGPQISVRLLAHKIQSPQDW
ESLQALTVLEACMKNCGRRFHNEVGKFRFLNELIKIVSPKYLGDRVSERVKTKVIELLYS
WSVALPDEAKITEAYHMLKKQGIVAEDPVVPVDKTLVPSPKPKNPVFDNEEKSKRLAELL
KSKKPEDLQEANRIIKNMVKEDEALQQKVSHRVSTLEEVNNSVKLLNEMLSHFKKDESTQ
EDKELLKDLYNDCDKLRTAVFRLATETDDDDSALGDILHASDDLSRVINSYKKIVEGQTI
TTDIPGSTALERATGRTSSEILIDLTDLDSGTPSPLKHVLTSPQHSDSLPADLLTLTPLV
GAQPSSSNTSSGSSSFQTSPPSSQLPNSFSLLDDELGSLGLTNLDSNSSKSAEKNTKEAQ
SNQWISSQTSKPVIDLLGNSAPLNPLVSTAPPASEATSVFENSLQQSCKDFAMLGLDKAS
SESKYSSLGVHPALTTFSLPTGVAPVPSTVTSAKPQSFAPDSPLFRSLSPTFPTSHSPSG
SDISLTSVFVPLEAIKPSKECPVTAYDKDGVRVLLHFATDHPPGRPDVLVIVVSMLNTAP
LLVKNVVFQVAVPKSMRVKLQPPSGTELAPFNPFMPPSSITQIMLLANPQKEKVRVRYKL
TFILGDKQVTESGEIDKFPPVERWGHL
NT seq
2064 nt
NT seq
+upstream
nt +downstream
nt
atggcggatccggaaggagagtcactggagtcatggctaaacaaagccaccaatccttcc
aacagacaggaagagtgggagtacatcattgggttctgtgaccaaatcaataaggaactt
gaaggtccacagatatcggtcagattattagcacataaaatccagtcaccacaagactgg
gaatcgttacaagcattaactgttttagaagcttgcatgaagaactgtgggagaagattt
cataatgaagttggaaaatttagatttttaaatgagctcatcaaaatagtttcaccaaag
tatttgggagacagagtatctgaacgagtgaagactaaagtaatagagttgctttacagc
tggtcagttgctttaccagatgaggcaaagatcacagaggcctatcatatgctaaagaag
caaggcattgtagcagaagacccagtggttcctgtggacaagaccctcgttccctcacca
aagcccaagaatccagtgtttgacaatgaggaaaagagtaagcgtctcgcagaacttctt
aaaagtaaaaagccagaggatcttcaagaagccaaccgcattatcaaaaacatggtcaaa
gaggatgaggctctacaacagaaagtatcccatcgtgtcagcaccctagaggaggtaaac
aacagtgtgaagctccttaatgagatgctaagtcatttcaaaaaagatgaatcaacgcaa
gaagacaaagaacttctaaaggatctgtataatgactgtgacaaacttagaactgctgtc
ttcagacttgccacagagacagatgatgatgacagtgccttaggcgatattttgcatgct
agtgatgatctctcacgagtcattaactcctataaaaagattgttgaaggacaaaccatt
acgactgacataccaggatcaacagctttggaacgcgccactggcagaacctcttctgaa
attttgattgatttgactgatttggactctgggaccccttcaccccttaaacatgttttg
acttcacctcagcactctgattctctaccagctgacctcctcacacttactcctttagtc
ggagctcagccttcctcttccaacacctcctctggatcatcaagtttccaaaccagtcct
ccatcaagtcagcttccaaacagtttttctcttctagatgacgaacttggttcattaggc
cttactaatctggactcaaactcaagcaagtcagcagaaaagaatacaaaagaagctcaa
agcaatcagtggatctcttcacaaacttcaaaaccagtgattgacctgctcggcaactct
gctcccttaaatcctctcgtctcaacagcgccgcctgcctctgaagctacctcagtcttt
gaaaactccctccagcagagctgcaaagattttgccatgttgggcctggacaaggctagc
agcgagtccaagtattcaagcttgggtgtccatcctgcattaaccacattcagtttgccc
actggagtagcaccagtgccttctactgtaacctctgccaaacctcagagctttgcaccg
gacagccctctcttcagatccctctctcctacattccccacaagtcattcaccctcgggc
tcggatatctccctgaccagtgtctttgtcccgcttgaggccatcaaaccaagtaaggag
tgtccagtgacagcctatgataaagatggtgttcgtgtgttgttgcactttgctactgac
cacccgcctggtcgccctgatgttctggtgattgtggtgtccatgctgaacacagcacct
ctgttggtcaagaacgtagtgtttcaggttgctgtgccaaagtctatgagagtgaagctg
caacccccttctggaacagaactggccccctttaaccccttcatgcctcccagttcaatc
actcagattatgctgctggctaacccacagaaggagaaagtgagagtgaggtacaagttg
acatttattcttggagataaacaggtcacagagtctggagagatagacaagttccctcca
gtggaaagatggggtcatttgtag
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