Labeo rohita (rohu): 127167254
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Entry
127167254 CDS
T09007
Symbol
fancd2
Name
(RefSeq) Fanconi anemia group D2 protein
KO
K10891
fanconi anemia group D2 protein
Organism
lroh
Labeo rohita (rohu)
Pathway
lroh03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
127167254 (fancd2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lroh03400
]
127167254 (fancd2)
DNA repair and recombination proteins [BR:
lroh03400
]
Eukaryotic type
DSBR (double strand breaks repair)
FA (Fanconi anemia) pathway
FANCD2-I complex
127167254 (fancd2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FancD2
FANCI_S2
CCDC53
Ferritin
Motif
Other DBs
NCBI-GeneID:
127167254
NCBI-ProteinID:
XP_050969134
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All DBs
Position
6:complement(26341679..26360339)
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AA seq
1445 aa
AA seq
DB search
MMRKKKRSSSTVDDDSILDVSKSKKTKSSGRPTKSSVQDSYPDSVFVQFLKESGVTLTAG
STANEIAVDQVIFQKRLQQHLRKNPRFPNIIQEFISALETYIEDPERFRNCLLPCVPSSS
SQQDTNSGSYQESLVRLLLGIEMLQPLVINTLFEKLPEFMFEGVSEDGLNVPRLIINQLK
WLDRIVDGKDLSSKLMQMVSVAPVEIQRDIITSLPEILEDSQHGDMAKELNGLLQQNTQL
PVPILDALSSLNLSAALLSEVREAVMGTLSAVQLEDLPVVVKFILHSISASDANEVVCDL
RKKLELEQCVLPAVLQASQSRMKSKAASGSSSVPSCSNGQDSVTLVLEVIKSAIRFQKTI
SEAWLKAIENIDESEDHKVVDLLVLFILHSTNANHSRRGAERVLKVKVRKGLIQENLLQK
TFKGHAQVMRGYFPSILTLAQGLLRSPDCCVVPFGGHMYKQAFTAFDSYCKQEVVGSLVT
HACSGVSGEVDVALELLCELVSQKPAEMSQFTVFVKGILDYMDNLTSQQIRRLFHLLSRL
AFGQEQHGGHIQDDMHIVIRKQLSSTVPKYKRIGIIGAVMMVGSMGACRNKPDDSQGGTL
PKDTHRQVMALLELVRTSSESSPEAAALYYDELANLLQTCKLDPLVQAWIGKSVLEDFQE
DFVVDLGPDISGSFLFPASVMYNLDEDESQGGIAINLLPLMTQDQQHKTDTTQPAGVKKE
RRVSPLCLSPFFRLLRLCEEVQHQGDLEEIDALLGCPLILNDMEVTEKVESLSKAEREFL
CSLLFYTINWFREVVNAFCKQNDPEMKMKIITRIQNITYLQSLLQTCLAATPGYTPPQAN
FDGESAEGMIPSASIALPKKGKKETSGKKRKASASKNSSGDKSQLEGAAEAEDSQQDHPE
KESEKEKEKDAKSGVSLSSYWPFFRELDVEALSVLQCGLLSRTLLDTELHSKLREEVQLG
PAELLFLLEDMWRKLDFSLASAPAKKAPFLKSKMDRAVGFAHLQQKNAKEIATFCTELLP
TLCTHLENCHNHFQTVLSENQGVVDAPGVDVKEQQLMCSAYHLLLQVLHTTFSWAGFSGP
EHRALLKSALGVLAGRLKEDETDLTLDQLSRHAFEYLQNFRSTVPSLNTALCLTQLLIVL
SQYGGSNHRTYREQITSLSRHFLCQEWVTASGEKERGNKYNDALQTLLSIYLEHTDDVLK
AVEEIAGEGVPELLNAAKDANSRSWPTLNRQTFLVYYKSMMAELERAVRKIPPSKHTDNQ
EVQSEKLLTWNLAVRDFHILINLVKMFDSRPVLTVCLKYGRLFLESFLKLGMPLLDYSFK
KHKEDVQSLLKTFQLSTRQLHHMCGHSKIRQDTGLTNHVPALKKNLEQFVYRVKAMLTLN
HCQEAFWLGNLKNRDLKGEEILSQRSQAADEEEEESSQVQSEEEESDSDDRNNEQEEVEE
SDESD
NT seq
4338 nt
NT seq
+upstream
nt +downstream
nt
atgatgcgtaagaagaaacgttcatccagcacagtcgatgacgattccatacttgacgtt
tcaaagtcaaaaaagaccaagagcagtggacgacccacaaagtcttcagtgcaggattcc
tacccagattcagtttttgttcagtttctgaaggaatctggtgtcactttgacagctggc
agtactgctaatgaaattgctgtagaccaagtgatatttcaaaagcggctccagcagcat
ctacgaaaaaatcctagattccccaatataattcaggagtttatatctgcactggaaaca
tacattgaagacccagagagattcagaaactgcctgctgccttgtgtgccatcatcctct
tcacagcaggataccaattctggctcctatcaggaaagtcttgtacgcttgttgcttgga
atagagatgctacagccactggtcataaacactttgtttgaaaagcttccagaattcatg
tttgagggtgtgagtgaggacggcctcaacgttccccgtctcataataaaccagttgaaa
tggctggaccgaattgtagatggcaaggatttgagcagcaagctgatgcagatggtgtct
gtggctccggtggagatccagcgggacattattacaagcctgcctgaaatcctggaggac
tcccagcatggagacatggccaaagagctaaatggcttacttcagcagaacactcagctc
cctgtgcctatattggatgctttatccagcttgaatctgagcgctgctttactgtccgag
gtgcgtgaggcagtaatgggaactctctctgctgtgcagttagaggatcttcctgttgta
gtcaagttcatcttacactccatctctgcatctgatgctaatgaggtggtgtgtgacctg
cgtaaaaagctggagttggagcagtgtgttttgccagcagttctgcaggcctcccagagt
cgtatgaaaagcaaagccgcatcagggtcctccagtgtcccatcatgcagcaatggtcag
gatagtgtgactttagttttggaggtcataaagtcagctattcgctttcagaaaaccatc
tcagaggcttggttgaaagccatagagaatattgacgagtcagaggaccataaggtggtt
gatctgctggtgctgttcatccttcactccactaatgcaaaccacagccggcgtggggca
gagagagtgctcaaggtcaaagttcgcaagggtctgattcaggaaaacctcttgcagaag
acctttaagggtcatgctcaggtgatgcggggttatttcccatccattctgactttagct
cagggactcttgcgctctccagactgctgtgtggttcctttcggaggtcacatgtacaaa
caggcctttactgcctttgactcctactgtaagcaggaggtggtgggctctctggtcaca
cacgcatgcagtggcgtgagtggcgaggtggatgtggctcttgagctgctttgtgagctg
gtgtctcagaaacctgcagaaatgagccaattcactgttttcgtgaagggtattctggac
tacatggacaacctgacctcacagcaaatccgacgcctcttccacctgctcagccgcctg
gcatttggacaggagcagcacggaggacacattcaggatgacatgcacatcgtgatccgt
aagcagttgtctagcacggtgcccaagtacaagcgaattggtatcattggggcggtcatg
atggtgggcagtatgggggcatgcagaaataaacctgatgactctcagggtggcacactg
cccaaagatacacacagacaggtgatggctctgttggagctggtgcgcacgagcagtgag
agttcccctgaagctgccgctctctattacgatgagctggccaacctgctgcagacttgc
aaactggaccctctagtgcaggcatggatcgggaagagtgtgttggaggattttcaggaa
gactttgttgtagaccttggaccagatatatcgggctcattcctgtttcctgcctctgtg
atgtataatttggatgaggatgagagtcaagggggaatcgccatcaatctactgccactt
atgactcaagaccagcagcataaaacagacacaacacaaccagctggagtcaagaaagag
aggcgtgtgtctccactttgcctgtccccgtttttccgcctgctgaggttgtgtgaagag
gtgcagcaccaaggtgatctggaggagattgatgctttgctaggctgtcctctgatcctg
aacgatatggaggtgacggagaaggtggagagtctgtctaaggctgagagagagttcctc
tgttctctgctcttttacaccatcaactggttcagagaggtggtgaatgcattttgcaag
cagaacgatcctgagatgaaaatgaaaattataactcgtattcagaatatcacttacctt
cagagtttactgcagacgtgcttggcagctacaccaggctacactcctcctcaggcaaac
tttgatggagagagtgctgaaggaatgataccctctgcttcaattgctttgccaaagaaa
ggaaagaaagaaacatctgggaagaagaggaaggcctcagcgagtaagaactcctcaggt
gacaaatcacagctggagggggccgcagaggccgaagattcgcaacaggaccatccagag
aaagagagcgagaaggagaaagaaaaggatgccaaatcaggggtcagtctgtcatcatac
tggccgttcttcagagagctggatgttgaagctctgagcgttcttcagtgtggccttctg
tcccggacgttattggacactgagctacatagtaagttaagggaggaagtccaactaggc
cctgcagagttgcttttcctgttggaggacatgtggcgtaaactggacttcagtttggct
tctgcaccagccaaaaaagcgccatttcttaaaagtaagatggatagagcagttggcttt
gctcacttgcagcagaagaatgctaaagaaatcgccaccttctgcactgagctgctgccc
acactttgcacacacctggaaaactgccacaatcactttcagactgtgctctctgagaat
cagggtgttgttgatgctcctggtgtcgacgtgaaggaacagcagctcatgtgttcagcc
tatcatctcctattgcaagtgctacacactactttcagttgggccggattttcgggtcca
gagcatcgtgctctgctgaagagcgctctgggggtcctagccggccggctgaaggaggac
gagactgatttgaccctggatcagctcagtaggcacgcttttgagtacctgcagaacttc
cgaagcacagtgcccagcctgaacactgccctgtgtctgacccagctgcttattgtgctg
tcccagtatggaggatcaaaccacaggacctacagagaacagatcacatcgctgtcgaga
catttcctctgtcaggagtgggttacagcgagtggagagaaagagcgaggaaacaaatac
aatgatgctcttcaaactctcctcagtatttatctggagcacactgatgatgttctgaag
gccgtggaggaaatagcaggtgaaggggttccagagctgctgaatgctgctaaagatgct
aactcacgcagctggccaacactcaacaggcagacgttcctagtgtactacaagagcatg
atggcagagctagagagagccgtccggaagattcctcccagcaaacacacagataatcaa
gaggtgcagagcgagaagctcctaacatggaatctggctgtgcgtgacttccacatcctc
ataaacctggtcaagatgtttgacagcagacctgtacttactgtgtgtttaaagtatggt
cgtctttttctggagtccttcctcaagcttggaatgcctctgcttgactacagctttaaa
aaacacaaggaggatgttcagagtttactgaagaccttccagctcagtactagacaactg
caccacatgtgtggtcactcaaagattaggcaagatacagggttgaccaatcacgttcca
gccttgaagaaaaatctggagcagtttgtgtatcgtgtgaaagccatgctcactcttaac
cattgccaggaagccttctggctggggaacctgaagaacagagacttaaagggtgaagag
attctctcacaaaggtcacaggcagctgatgaagaggaggaagagtcctctcaggtgcaa
agtgaagaggaggagagtgactctgatgacaggaacaatgaacaggaagaagtggaggag
tcagatgaatcagactga
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integrated database retrieval system