Labeo rohita (rohu): 127167365
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Entry
127167365 CDS
T09007
Symbol
itgb7
Name
(RefSeq) LOW QUALITY PROTEIN: integrin beta-7
KO
K06590
integrin beta 7
Organism
lroh
Labeo rohita (rohu)
Pathway
lroh04510
Focal adhesion
lroh04512
ECM-receptor interaction
lroh04514
Cell adhesion molecules
lroh04672
Intestinal immune network for IgA production
lroh04810
Regulation of actin cytoskeleton
lroh04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
127167365 (itgb7)
04514 Cell adhesion molecules
127167365 (itgb7)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
127167365 (itgb7)
09142 Cell motility
04820 Cytoskeleton in muscle cells
127167365 (itgb7)
04810 Regulation of actin cytoskeleton
127167365 (itgb7)
09150 Organismal Systems
09151 Immune system
04672 Intestinal immune network for IgA production
127167365 (itgb7)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
lroh04147
]
127167365 (itgb7)
04515 Cell adhesion molecules [BR:
lroh04515
]
127167365 (itgb7)
Exosome [BR:
lroh04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
127167365 (itgb7)
Cell adhesion molecules [BR:
lroh04515
]
Integrins
Integrin beta subunits
127167365 (itgb7)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Integrin_beta
Integrin_b_cyt
EGF_2
I-EGF_1
Motif
Other DBs
NCBI-GeneID:
127167365
NCBI-ProteinID:
XP_050969324
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All DBs
Position
6:complement(24847212..24865085)
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AA seq
768 aa
AA seq
DB search
MKAVLIAATVLFHCLGQRCILGQEPLCQSHSSCSECIRSPSCAWCTQTDFLKPGESNERR
CDSVESLKNRKCKADHVINPVKHPLTNVKNSDLSDDVHNVVQLKPQNVNITLRVGVPFEF
TVEFKRAQGYPIDLYYLMDLSYSMKDDLEQIKTLGQKILKKLKDITQTVRIGFGSFVDKE
MLPYVSQVKARRQNPCPNRIDTCQPAFSFKNVLPLTDDASEFEREVSKQKISGNLDAPEA
GLDAIMQAAVCKDKIKWGNVTRILVYTSDDTFHMAGDGRLGGVFQPHNGQCLLNVNGSYN
GKAYDYPSVGHVSRVLQDNNIQLIFAVTEDIYPAYKALSALIPQSVVGVLKNDSSNVVDL
ISEAYGNLSSTLVLEQEGAPKELDVSYWSTCKGNKADIEWKEKGECQGIKHEKIAFKVRL
NASECLKEPQTFRIKMQGINEEVKITVHTECHCDCGASEKAATYCSGKGTLSCGLCSCDD
RFLGQQCQCAQQSDKDSIASMLASCRLDNSSRVCSGHGTCVCGKCECRGKLKGKFCECDD
NNCERHNSILCNGKGECQCGKCNCTENYTGSACECSPSQDNCTNDKGLCSGQGKCTCNHC
QCNEGFTGNHCSEFINACTKMKDCVACHVQTPDIEGCAVRCFNAKVIRLEGYHELHCTYA
DTTSYDVKLGFNGTIELQYADLPRSVDKTTLIIGISVSSIIFIGIIIIIIYRCLLELYDI
REYQNFVRAQKMTEWKEVQNPLFKGATTTVYNPLHDIEDKEKEHSELD
NT seq
2307 nt
NT seq
+upstream
nt +downstream
nt
atgaaggctgttttgatagctgcgacagttctttttcactgtttgggtcagaggtgtatc
cttgggcaggaaccgctttgccaatctcactcatcatgttctgaatgtataaggagtcct
agctgtgcgtggtgcacacagacagacttcctgaaaccaggtgagtcaaatgaacggcga
tgtgattctgtcgagtctctgaagaacaggaaatgtaaagcggatcatgtgatcaaccct
gtaaaacatcctttgaccaatgtgaaaaacagtgaccttagcgacgatgttcacaacgtg
gtccaactcaaacctcagaatgtcaacattacactcagagttggagttccatttgaattc
acagttgagtttaagagggctcaaggttaccctatagatctgtactacctgatggatctg
agctattccatgaaagatgatctggagcaaattaaaaccttggggcagaaaatcctcaag
aagctgaaggacatcacacagaccgtccggattggtttcgggtcttttgttgataaggag
atgttgccgtatgtcagtcaggtgaaggcaagacgtcagaacccctgccccaatcgcata
gatacctgccaaccggctttcagttttaagaatgtcctgcctctgactgacgatgccagc
gagtttgaacgagaagttagcaaacagaagatctctggcaacctggatgctcctgaggct
ggtttggatgccatcatgcaggctgcggtctgtaaggataagatcaagtggggtaatgtg
acacggattttggtttatacgtctgatgatactttccacatggcaggagatggacgacta
ggtggggtctttcagccacataatggacagtgtcttcttaatgttaatggttcctataat
ggaaaagcctatgattacccatcagtgggtcatgtatctagagttctgcaggacaacaac
attcagctcatatttgctgtgactgaggatatctatccagcatataaggcactgagtgca
ttgattcctcagtcagtggttggtgtattaaagaatgactccagtaatgttgtggatctc
atctctgaagcctatgggaatttgtcgtccacactggtgttagagcaggaaggagcacca
aaagaattagacgtgtcctactggtctacatgtaaggggaataaggcagatattgaatgg
aaggagaaaggagagtgtcaaggcatcaagcatgagaagattgcattcaaagtacgtttg
aatgcgtctgaatgtctgaaggagcctcagacatttcggatcaaaatgcaaggtatcaat
gaggaggtgaagatcacagtgcatacagagtgccactgtgactgtggtgcttcagagaag
gccgccacatactgtagcggtaaaggaactctctcgtgcggcttgtgcagctgtgatgac
aggtttttgggtcagcaatgtcagtgtgcgcaacagagtgacaaagactctatcgccagt
atgctggcgtcctgtcggcttgacaacagctcgcgggtttgcagtggacatggcacctgt
gtgtgtggcaagtgtgagtgtcgaggcaagctcaaggggaaattctgtgaatgtgatgac
aataattgtgaacgccataatagcattctctgtaatggtaaaggtgaatgtcagtgtgga
aaatgtaactgtactgaaaactacacggggtctgcatgcgagtgttcgcctagccaagac
aactgtacgaatgacaaagggctttgcagcggtcaaggcaaatgcacttgcaaccattgt
cagtgtaacgaaggcttcacgggaaaccactgctctgaattcattaatgcttgcacgaag
atgaaggactgtgtggcatgtcatgtacaaactcctgatatagaaggctgtgctgtaaga
tgttttaatgctaaagtaattcgtcttgagggctatcatgagctgcattgcacatatgca
gacaccacttcatacgatgtaaagcttggttttaacggcacaattgaacttcaatatgca
gacttgccacgttctgttgataagaccacgcttattattggcatctctgtgtcaagcata
atttttattggcattataataatcattatttaccgttgcctgctggagctgtacgacatt
agagaataccagaactttgtcagagcacagaaaatgactgagtggaaagaggtccagaat
cctcttttcaaaggtgccacgacaacggtgtataaccctttgcatgacattgaggacaaa
gaaaaggaacattctgagttggattaa
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