Labeo rohita (rohu): 127167448
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Entry
127167448 CDS
T09007
Symbol
smpd2b
Name
(RefSeq) sphingomyelin phosphodiesterase 2 isoform X1
KO
K12351
sphingomyelin phosphodiesterase 2 [EC:
3.1.4.12
]
Organism
lroh
Labeo rohita (rohu)
Pathway
lroh00600
Sphingolipid metabolism
lroh01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09100 Metabolism
09103 Lipid metabolism
00600 Sphingolipid metabolism
127167448 (smpd2b)
Enzymes [BR:
lroh01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.12 sphingomyelin phosphodiesterase
127167448 (smpd2b)
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Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos
SK_channel
Motif
Other DBs
NCBI-GeneID:
127167448
NCBI-ProteinID:
XP_050969484
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All DBs
Position
6:32867617..32878343
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AA seq
462 aa
AA seq
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MIYERCVSDSECFCISDFCLWIYFGSKTDCHHPIRLIAMTTSEPIRFRVFSLNCWGVRYL
SKNCKERFVMIGDLLNQEQLDIALLQEVWCEKDFLFLKKKLSSVYPYSHYYKSGFIGSGL
AVFSKHRIHDAFLYRFSLNGYPYMAQHGDWFGGKGVGKILLNINGLKIHVFVTHLHAEYC
REKDSYLPHRVVQAWELQQFVRHTSVGGDVVILGGDLNMHPDDLGTRLLRNYTGLQDSFS
EAANFDGCEEGYTHVSENPYTNADSLVPFGGGIRIDYILFKGSGEVDVSCESLSTTKGPV
PGHPFPYSDHEALTAEFLFTPTTKGNGCSKRQSGCVSDKLPELVNTVNEARTEVKVGLHC
AERMRHTAARTGIMGLVLLVLELAIAAVPLFALGAEQPFPKASFYLLGALCFAILLTTLM
LYIFYSMEVKALQGTEDQMRLALSSLQEQLKESPKVLSSDRL
NT seq
1389 nt
NT seq
+upstream
nt +downstream
nt
atgatttatgagcgctgtgtgtcagactcagagtgtttctgtatcagtgacttctgtctg
tggatttactttggctctaagacagactgtcaccatcccataagactcatcgccatgaca
acctcagaaccaatcagattccgtgtcttctctcttaactgctggggggtccgatacctc
agtaagaactgcaaagagcggtttgttatgatcggagacctgctgaatcaggaacagctt
gatatagcgttactacaggaggtgtggtgtgagaaagactttctgtttttaaagaagaag
cttagcagcgtctatccatattcccattattataaaagtggatttatagggagcggactg
gccgtgttttccaaacatcgaatccatgatgcatttctgtacagattctcattaaatgga
tatccatacatggctcaacatggcgactggtttggtggtaagggtgttgggaagatcttg
cttaacatcaatgggctgaagattcacgtttttgtcactcatctgcatgcagaatattgc
agagagaaagactcgtatctgccgcaccgagtggttcaagcctgggagctgcaacagttt
gtaaggcacactagtgttggaggagacgtggtgattctgggtggagatctgaacatgcac
ccggacgatctgggcactcgactgttgagaaactacacaggacttcaggacagcttcagt
gaggctgctaactttgatggatgtgaggaaggatacactcatgtatctgaaaacccttac
acaaacgcagatagtcttgttccatttggaggaggaatccggatagactacatcctgttc
aagggatcaggggaagtggatgtgagctgtgagtctttgtccaccactaaaggtccggtt
cctggacatccctttccgtactctgaccacgaggctctcacagctgagttcctgtttaca
ccgactacaaagggaaacgggtgctcaaagagacaatctggatgtgtttcagataagctt
cctgagctggtcaacacagtcaatgaagctcgtactgaagtaaaggtgggtctccactgc
gctgagcgcatgcgtcacaccgcggcacgtacaggcattatgggtctcgtcctgttagtg
ctcgagctagcaatcgccgctgtcccattgtttgctctgggagctgaacagccctttccc
aaagcctctttctacctgctgggggcgctgtgttttgccattctcctcaccactctgatg
ctgtacatcttctacagcatggaggtaaaggcactgcaaggcactgaggaccagatgaga
ctggcactaagtagccttcaagaacagcttaaggagtcccccaaggttttatcctcagac
cgtttgtga
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