Labeo rohita (rohu): 127167524
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Entry
127167524 CDS
T09007
Symbol
chsy1
Name
(RefSeq) chondroitin sulfate synthase 1
KO
K13499
chondroitin sulfate synthase [EC:
2.4.1.175
2.4.1.226
]
Organism
lroh
Labeo rohita (rohu)
Pathway
lroh00532
Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
lroh01100
Metabolic pathways
Module
lroh_M00058
Glycosaminoglycan biosynthesis, chondroitin sulfate backbone
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
127167524 (chsy1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
lroh01003
]
127167524 (chsy1)
Enzymes [BR:
lroh01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.175 glucuronosyl-N-acetylgalactosaminyl-proteoglycan 4-beta-N-acetylgalactosaminyltransferase
127167524 (chsy1)
2.4.1.226 N-acetylgalactosaminyl-proteoglycan 3-beta-glucuronosyltransferase
127167524 (chsy1)
Glycosyltransferases [BR:
lroh01003
]
Glycan extension
O-Glycan
127167524 (chsy1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CHGN
Fringe
Glyco_transf_7C
Glyco_tranf_2_2
Galactosyl_T
Motif
Other DBs
NCBI-GeneID:
127167524
NCBI-ProteinID:
XP_050969556
LinkDB
All DBs
Position
7:complement(45088105..45172800)
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AA seq
800 aa
AA seq
DB search
MAGRSRRSWFSVLLGLVVGFTLASRLILPRATELKKAGHKRRASGGTGGCGGGAGMMMMK
KEYGGALMPSTEKPAVPQSSSFLFVGVMTAQKYLNNRAVAAYRTWAKTIPGKVEFFSSEG
SDTSIPIPIVALQNVDDSYPPQKKSFMMLKYMHDHYLDQFEWFMRADDDVYIKSEKLESF
LRSLNSSEAIFLGQTGMGARDELGKLALEPGENFCMGGPGVIMSREVLRRMVPHIRQCLQ
EMYTTHEDVEVGRCVRRFAGVQCVWSYEMQQLFYENYEPNKKGYIRDLHNSKIHRAITLH
PNKNPPYQYRLHSYMLSRKIAELRHRTIQLHREIVQMSRYSNTEVHKEDLQLGMPPSFMR
FHPHQREEVLEWEFLTGKYIFSSSDGQPPRRGIDSSQKVALDDIIMQVMEMINANAKTRG
RVIDFKEIQYGYRRVNPMYGAEYVLDLLLLYKKHKGKTMTVPVRRHAYLQQTFSKIQFLE
DEEMDARVLAARINQDSDSLSFLSNSLKMLVPFKLSSQAGVEQHEPKEKKINILVPLAGR
YEIFVRFMANFEKICLIPNQNVKLLILLFSTDNNTERIKQIELMREYHMKYPKADMEIKP
VSGPFSRALALEVGSAHFTNDSLLFYCDVDLLFTPDFLNRCRGNTVLGEQTYFPIIFSQY
DPKVVYAGKVPSDNHYVFTSKTGLWRHYGFGIVCVYKGDLVKAGGFDVSIQGWGLEDVDL
FNKFVQSGIKLFRSTDTGIVHVHHPVVCDPNLDPKQYKMCLGSKASSHGSTQQLAELWLE
KNNHGFRKISNSNNESMRTE
NT seq
2403 nt
NT seq
+upstream
nt +downstream
nt
atggcaggcagaagccgcaggtcgtggttcagcgtgttgctgggtctggtggtcgggttc
acactggcgtccaggctcatcctgccccgggccactgagctcaagaaagcgggtcacaag
cggcgggcgagcggcggcacgggcggctgcggaggtggagcagggatgatgatgatgaag
aaggagtacggaggggcgctgatgcccagcacagagaagcccgcggtgccccaatccagc
agtttcctgttcgtgggcgtcatgaccgcgcagaagtacctgaataaccgcgccgtggca
gcatataggacctgggctaagaccatcccgggcaaagtggagtttttctccagcgagggt
tcagacacgtcgatcccgatccccatcgtggctctgcagaacgtggacgactcgtaccct
cctcagaagaagtcctttatgatgctcaagtacatgcatgaccactacctggaccagttc
gagtggttcatgcgagccgacgacgacgtctacatcaaaagcgagaagctggagagcttc
ctaaggagtctcaacagcagcgaggctatctttctcggccagacgggcatgggcgcccgc
gacgaactgggcaagctggccttggaaccgggcgagaacttttgcatgggcggccctggc
gtgatcatgagccgcgaggtgctgcgcaggatggtgccccacatccgccagtgcctgcag
gagatgtacaccacccacgaggacgtggaggtgggccgctgcgtgcgccgattcgccggc
gtccaatgcgtctggtcctatgagatgcagcagctgttctatgagaattacgagccgaac
aagaaagggtacatccgtgatcttcacaacagtaagatccaccgggccataactcttcac
cccaataagaacccgccataccagtatcggctacacagctacatgctaagccgcaagatt
gcggagctgcggcaccgcaccatccagctccaccgcgaaattgtgcagatgagccgctac
agcaacaccgaggtgcacaaggaagacctccaactaggcatgcctccgtccttcatgcgc
ttccacccacaccagcgcgaggaggtgctagaatgggagttcctcacgggcaagtacatc
ttctcatcgtcggacgggcagcctccacgtcgaggcatcgactcctcacagaaggtggcg
ctggacgacatcatcatgcaggttatggagatgatcaacgccaacgccaagacgcgagga
agagtcatcgatttcaaggagatccagtacggctaccgaagagtcaaccccatgtacgga
gccgagtacgtactggatctgctcttgctctacaaaaagcacaaggggaagaccatgacg
gttcccgtacggaggcatgcttatctccagcagaccttcagcaagattcagttcttggaa
gacgaggagatggacgcccgagtcttggctgccaggatcaaccaagactcagactcactg
tccttcttgtccaactctctcaagatgctcgtcccgttcaagctgagctcccaagcggga
gtggagcaacacgaacccaaagagaagaagatcaacatcctcgtgcccctggcgggacgc
tacgagatcttcgtgcgcttcatggccaacttcgagaagatctgcctgattcccaaccag
aatgtcaagctcttgattctgctcttcagcacggacaacaacacggagcgcatcaagcag
atcgagctcatgagggagtaccacatgaagtatcccaaagccgacatggagatcaaaccc
gtttccggacccttctcccgtgccctggccctggaggtcggctcggcccactttaccaat
gactccttgctcttctactgtgacgtggacttactgttcacccccgacttcttgaaccgg
tgtcgcgggaacaccgtactcggggagcagacgtacttccccatcattttcagccagtac
gacccgaaggttgtctacgcgggcaaggtgcccagcgacaaccactacgtgttcacttcc
aaaacaggcttgtggagacattacggcttcggaatcgtctgcgtctacaaaggagacttg
gtcaaagcgggcggctttgacgtctccatccaaggttggggtctggaggacgtggacctc
tttaacaaattcgtccagtcggggatcaagctgttccgcagcacggacaccggcatcgtg
cacgtccaccaccccgtggtttgcgaccccaacctcgatcccaagcagtacaaaatgtgc
ctgggctccaaagcgtcctcgcacggctctacgcagcaacttgccgagctgtggttggag
aagaacaaccacggcttccgaaagatctcgaactccaataacgaatcgatgaggacagaa
tag
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