Labeo rohita (rohu): 127167547
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Entry
127167547 CDS
T09007
Symbol
vps35
Name
(RefSeq) vacuolar protein sorting-associated protein 35
KO
K18468
vacuolar protein sorting-associated protein 35
Organism
lroh
Labeo rohita (rohu)
Pathway
lroh04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
127167547 (vps35)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lroh04131
]
127167547 (vps35)
Membrane trafficking [BR:
lroh04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Retromer subcomplex
127167547 (vps35)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps35
CENP-O
FerA
Motif
Other DBs
NCBI-GeneID:
127167547
NCBI-ProteinID:
XP_050969634
LinkDB
All DBs
Position
7:23634835..23675236
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AA seq
844 aa
AA seq
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MGVDNLSGLVVLCVGSARHEAEQQQRQSHDTTHSQGGHPVFPLTYLIIMPTTQQSPQDEQ
EKLLDEAVQAVKVQSFQMKRCLDKNKLMDALKHASNMLGELRTSMLSPKSYYELYMAISD
ELHYLEVYLTDEFAKGRKVADLYELVQYAGNIIPRLYLLITVGVVYVRSFPQSRKDILKD
LVEMCRGVQHPLRGLFLRNYLLQCTRNILPDDGEQAEEEMTGDINDSIDFVLLNFAEMNK
LWVRMQHQGHSRDREKREKERQELRILVGTNLVRLSQLEGVNVEKYKQIVLSGILEQVVN
CRDSLAQEYLMECIIQVFPDEFHLQTLNPFLRSCAELHQNVNVKNIIIALIDRLALFAHR
EDGPGIPAEIKLFDIFSQQVATVIQSRQDMPSEDVVSLQVSLINLAMKCYPERVDYVDKV
LESTVEIFNKLNLEHIATSSAVSKELTRLLKIPVDTYNNILTVLQLKHFPPLFEYFDYES
RKSMSCYVLSNILDYNTTIVAQDQVDAILNLVSTLIQDQPDQPAEDPDPEDFAEEQSLVG
RFIHLLHSDDPDQQYLILNTARKHFGAGGNQRIRHTLPPLVFAAYQLAFRYKENSSSDDK
WEKKCQKIFSFAHQTISALIKAELAELPLRLFLQGALAAGEIGFENHETVAYEFMSQAFS
LYEDEISDSKAQLAAITLIIGTFERTRCFSEENHEPLRTQCALAASKLLKKPDQCRAVSI
CAHLFWSGRNTDKGGEEICDGRRVMECLKKALKIANQCMDPSLQVQLFIEILNRYICFYE
RENDAVTVQVLNQLIQKIREDLPNLEASEETEQINKHFHNTLEHLRLQRESPESEGPAYE
GLVL
NT seq
2535 nt
NT seq
+upstream
nt +downstream
nt
atgggcgtggacaacctctcagggcttgttgtgctgtgtgtgggtagtgctcgtcatgag
gcggaacagcagcagcggcagtcacatgacacgacacattcacaggggggtcatccagtg
tttcctctaacatacctaataatcatgcctaccacacagcagtcgccccaggatgagcag
gagaagctgctggatgaagctgtgcaggcagtcaaggttcagtcatttcaaatgaagcgc
tgtctggacaagaacaagttgatggatgcactgaaacatgcctcaaatatgttgggggag
ttgaggacttctatgctttctcccaagagctactacgaactctatatggccatctcagat
gagctgcattacctggaggtctatttgacagatgagttcgccaaaggccgcaaggtcgct
gacctctatgagcttgttcagtatgcagggaacatcatccctagactgtacctgttgata
accgtcggagtggtgtatgtccgctctttcccccaatcccgcaaagacatactaaaggac
ctggtggaaatgtgtcgtggtgtgcagcatccactccggggcttgttcctcaggaactac
ctgctgcagtgtacgcgcaacatcctgcctgacgatggagagcaggctgaggaagagatg
accggggacattaatgactccattgactttgtactgctgaattttgccgagatgaataaa
ctgtgggtgcgcatgcagcatcagggacacagtagggacagagaaaagcgggagaaggag
aggcaagagctgcgtatcctcgtaggaaccaatctggtccgactcagccagctggaaggt
gtcaatgtggaaaagtacaaacagatcgtgttgtctgggatcttggagcaggtggtgaac
tgtagagactctctagcacaggaatacctcatggagtgcatcatacaggtctttccggat
gagttccacctgcagacgctgaacccgtttcttcgctcatgtgccgagctgcaccaaaac
gtgaacgtcaagaacatcatcattgctcttattgacagattggccttgtttgctcacaga
gaagatggacctggaatccctgctgaaatcaagctatttgatattttctcacagcaagtg
gcaactgtcatacagtctcgtcaggacatgccatctgaagatgttgtttcgctccaagtg
tctctcattaatctggctatgaagtgctatcctgagcgtgtggactatgtggataaagtg
ttggaaagtactgtggagattttcaacaaacttaacctggaacacattgccaccagcagc
gcggtgtctaaggagctgaccaggctgctaaagatccccgtggacacgtacaataacatc
cttacggtgctccagctcaagcattttccaccactctttgagtactttgattatgagtca
cgcaaaagcatgagctgctacgtgctgagcaacattctggactacaacaccaccatagtg
gcccaagatcaggttgatgcgatcctgaacctggtgtctacgctgatccaggaccagcca
gaccagcctgctgaggatcctgacccggaggactttgcagaggaacagagcctagtgggc
cgctttattcatctgctgcattcagacgaccctgaccagcagtatctgattttaaacact
gccaggaaacactttggcgctggagggaaccagaggattcgacacactcttcccccgctg
gtgttcgctgcttatcaactggccttccgttacaaagagaactcctcctcagatgacaaa
tgggaaaagaaatgtcagaagattttctcattcgctcatcagaccatcagtgctctgatc
aaagcagagctggcggagttacccctgaggcttttcctccaaggggctctggcggctgga
gagatcggttttgagaaccatgaaactgttgcctacgagttcatgtctcaggcgttctcc
ctgtatgaagatgagatcagcgactccaaggctcagctggccgccattacgctgatcatt
ggcacatttgagcgtacacggtgcttcagcgaagagaaccacgaacccctgcgtacccaa
tgtgccctggctgcctccaaactgctgaagaaacccgaccaatgccgtgcagtcagcatt
tgtgcccatcttttctggtcaggacgcaacactgacaaaggtggagaagagatctgtgat
gggcggagggtgatggaatgcttgaagaaggctctgaagatcgctaaccagtgcatggac
ccgtccttgcaagttcagctcttcattgagatcctcaacagatacatctgcttctacgaa
cgagagaatgatgcggtgacagtccaagtgctgaatcagctgatccagaagatccgtgag
gatctcccgaacctggaggccagcgaggagacggagcagattaacaaacacttccacaat
acactggagcacctgcgtctgcagagagagtcgcccgagtctgagggacctgcttacgag
gggttggtgctgtag
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