Labeo rohita (rohu): 127167618
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Entry
127167618 CDS
T09007
Symbol
irx3a
Name
(RefSeq) iroquois-class homeodomain protein IRX-3a
KO
K24889
iroquois-class homeodomain protein IRX
Organism
lroh
Labeo rohita (rohu)
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lroh03000
]
127167618 (irx3a)
Transcription factors [BR:
lroh03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain TALE
127167618 (irx3a)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Homeobox_KN
Homeodomain
Motif
Other DBs
NCBI-GeneID:
127167618
NCBI-ProteinID:
XP_050969709
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All DBs
Position
7:complement(27581409..27584845)
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AA seq
454 aa
AA seq
DB search
MSFPQLGYQYIRPIYPQDRQGIGSARAGTDLSPSGALSNVLSTMYGSPFAAAQSYGAFLP
YSNDLSIFNQLGAQYELKDSPGVQHPGFAHHHPAFYPYGQYQFGDPSRPKNATRESTSTL
KAWLSEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENKMTWTPRSRTDEE
GNVYNSDHEGEDGDKREDEEEIDLENIDTENIENKDDLDEQDELHSDLKLDGRSDSEISD
GYEDLQGPEQRLFKAMVKDGKEIHGDRAEHFHHHNHHHHHHHNSLEQASSEPVKLNQAII
NSPPSENNPPPAPKPKIWSLAETATTPDNPRKSPLMNGTSAASGAQTIITPHRLLSCPVG
KIQSWTNRGFTAHQLALLNSNHYLGLSNQASANGLALYSRQAEDRSQNSESTVTERSSAL
EAEKKLLKTAFHPVQRRPQNQLEAAMVLSALSSS
NT seq
1365 nt
NT seq
+upstream
nt +downstream
nt
atgtctttcccacagctgggatatcagtacatccgacccatatacccgcaggacaggcag
gggataggcagtgcccgagctgggacagacctgagcccgtccggagcgctctctaatgtt
ctctctactatgtacggatcacctttcgctgccgcacaaagctatggagcttttcttcct
tattcaaatgatctgtccattttcaaccagctgggggcacagtacgaactgaaggacagt
ccgggcgtccagcatcctggatttgcccaccatcatcctgctttttacccatatggtcag
taccagttcggagacccttccagacccaaaaatgccaccagggagagcaccagcacactc
aaggcctggttaagtgagcaccggaaaaacccgtaccccaccaaaggcgagaagatcatg
ctggccattatcactaaaatgaccctcactcaagtgtccacctggttcgccaacgccagg
aggaggctaaagaaggagaacaagatgacctggaccccacggagtcgcacggacgaagaa
ggaaatgtttacaacagcgatcacgagggagaggacggcgacaaacgcgaggatgaggag
gaaattgatttggaaaatattgacacggagaatattgagaataaggacgatttagacgag
caggacgaactgcattctgatttgaaactggacggcaggagcgactctgaaatttcagac
ggctatgaggatttacaaggaccggagcaaaggttgttcaaagcgatggtgaaagacggc
aaagagattcacggcgaccgcgcagagcactttcaccatcacaatcatcatcaccaccac
caccacaacagcttagaacaggccagcagcgagccggtcaaactcaaccaggccatcatc
aactctccgccctcagaaaacaacccacctccggctccaaaacctaagatctggtctttg
gcagagaccgccacaactccagacaatccacgaaaatctcctctgatgaacgggacttcc
gctgcgtccggcgctcagaccatcatcactcctcacagactcctttcgtgtcccgtaggg
aaaatccagagctggacaaatcggggtttcaccgcacaccagctcgccttgctgaactca
aaccactacttaggactcagtaaccaggcttcggcgaatggccttgccctgtacagcaga
caagcagaggacaggagtcaaaactccgagtccacagtcacagaaagatctagtgccttg
gaagcagagaaaaagttgttaaaaacagccttccatcctgttcaaagacggccccagaac
caactcgaagctgccatggtattatccgccctctcgtcctcgtag
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