Labeo rohita (rohu): 127167757
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Entry
127167757 CDS
T09007
Symbol
fxr2
Name
(RefSeq) fragile X mental retardation syndrome-related protein 2 isoform X1
KO
K15516
fragile X mental retardation protein
Organism
lroh
Labeo rohita (rohu)
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lroh03019
]
127167757 (fxr2)
Messenger RNA biogenesis [BR:
lroh03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
127167757 (fxr2)
Factors involved in mRNA localization
Other mRNA localization factors
127167757 (fxr2)
mRNA cycle factors
Stress granule specific factors
127167757 (fxr2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FXMRP1_C_core
KH_9
Tudor_FRX1
FXR_C1
KH_1
Agenet
KH-I_KHDC4-BBP
DUF150_C
Tudor_2
KH_5
Motif
Other DBs
NCBI-GeneID:
127167757
NCBI-ProteinID:
XP_050969930
LinkDB
All DBs
Position
7:complement(37290285..37392748)
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AA seq
677 aa
AA seq
DB search
MDGLAVEVRGSNGAFYKGFIKDVHEDSLTIVFENNWQPERQLPFSDVRLPPPADYHKDIC
EGDEVEVYSRANEQEPCGWWLARVRMMKGEFYVIEYAACDATYNEIVTSERIRPVNPNSP
SSENSFYKVPIAVPEDLREICLTENIHKDFRKAIGANCIFYNTFTHQLIVLSTNECTVKR
AGLLSDMHFRSIRTKLMLMSRNEEATKHLETSKQLASAYQEEVRVREDLMGLAIGSHGAN
IQQARKVPGVTAIELEEESCTFRIYGETPEAVKQARTYLEFKEDSFQVPRNLVGKVIGKN
GKIIQEIVDKSGVVRVRIEGDNDKKLPREEVGRQGAGRDNTVSSQEGMVPFIFVGTKENI
SNAQALLEYHVAYLQEVEQLRLERLQIDEQLRQIGVGYRAPPSRSGSGVAGERERGYLTD
ESTNSLQTTRTYGGRGRGRKSNNAYSGYGTNSEMSNASETEETGEREPRPKGVGGDDRGS
KRGGRGRGSSTGRGRGGPGPRNTNTISSVLRDPDSNPYSLLEGEGELGGDTDASESMGGT
DRRRRSRRRRNDQEPSLMDAAANESDGQAAASENGLEEEGRPQRRNRSRRRRNRGNRPEG
SSTSRDRQPITVADFISRADSQSRQNLPGKKEVTPHTSHPKENGTSENKEERAPSKRSPS
NGVASPGEAPALVNGVS
NT seq
2034 nt
NT seq
+upstream
nt +downstream
nt
atggacgggttggcggtggaggtgcgcggctccaacggggccttctacaagggtttcatc
aaggatgtacatgaagactccctcacaatagtctttgaaaacaactggcaaccagagaga
cagctgccgttcagtgacgtgaggttgccgcccccggccgattaccacaaggacatttgt
gagggagatgaggtggaggtttactccagagccaacgagcaggagccctgcggctggtgg
ttggcgagggtgaggatgatgaagggagagttctatgtgattgaatacgcagcctgcgac
gccacatacaatgaaatcgtcacgtcggaacgaatccggccagtcaatcccaacagcccc
tcctctgaaaactccttttacaaagtccccattgctgtacctgaggatctcagagaaatc
tgtttgactgaaaacatccacaaagacttcaggaaagcaattggagccaactgcatcttc
tacaacacctttacacaccaacttattgtcctgtccacaaatgagtgcacggtgaagcga
gcaggcctactaagtgacatgcacttccggagtattcgcaccaaactgatgttgatgtcc
cgtaacgaagaggccactaaacacttagagacgagtaaacagctggcgtctgcgtatcag
gaggaagtgagggtgcgtgaagatctaatgggtctggccattggttctcacggcgccaac
atccagcaagcccgcaaagttcccggcgtcactgccattgagctggaagaagagagctgc
acattcagaatctatggagagaccccagaggctgtgaagcaggccaggacgtatctggag
tttaaggaggattccttccaggttccaaggaaccttgtaggcaaagtcattggtaaaaac
ggcaaaattatccaggaaatagttgacaaatcgggcgtggttcgagtccggatcgaaggg
gacaatgataaaaagctgcccagggaggaggtaggcaggcagggggctggcagagacaac
actgtcagcagccaagagggtatggttccctttatctttgttggaaccaaagagaacatc
agtaacgcccaggccttgctcgaataccatgtggcctaccttcaggaggtggagcagttg
cgtctcgagcgcctacagatcgatgagcagctccgtcagattggggtgggataccgcgca
ccccccagccgctctggttcaggggtcgctggtgagcgtgaacggggttaccttacagac
gagagcaccaactccctgcagaccacacgcacctatggaggaagaggacgtggacgcaaa
tctaacaatgcgtattctggctatggaacaaactctgaaatgtcaaatgcatcagagacc
gaagaaacaggggagcgggagcccaggccaaaaggtgttggaggcgatgacaggggttcc
aagcgtggaggtcgtggccgtggctccagcactggcaggggccggggaggaccagggccc
cgaaacaccaacactatcagctcagtgctccgagatccagacagtaacccgtactctctg
ctggagggagaaggtgaactaggcggtgatacagatgctagcgagagcatgggcggcact
gaccgcaggagacgttcacgtcgtcgccgtaatgaccaggagcccagccttatggatgca
gccgctaacgaatcagacggtcaggcagctgccagtgagaacggactggaagaggagggc
aggccccagcgccgcaatagaagccgccgccgccgtaacagaggcaatcgtcctgaggga
agctccaccagccgtgacagacagccgattactgttgctgacttcatctctcgtgccgat
tcccagagcagacagaatctcccagggaagaaggaggtgacaccgcacacgtcccatccc
aaggaaaatgggactagcgagaataaggaagagcgcgctccttccaaacgctcccctagc
aatggcgtggcgtcgcccggggaggctccagccctggtgaatggcgtctcgtaa
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