Labeo rohita (rohu): 127167801
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Entry
127167801 CDS
T09007
Symbol
sltm
Name
(RefSeq) SAFB-like transcription modulator isoform X1
KO
K25093
SAFB-like transcription modulator
Organism
lroh
Labeo rohita (rohu)
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
lroh04990
]
127167801 (sltm)
Domain-containing proteins not elsewhere classified [BR:
lroh04990
]
Other domain-containing proteins
RRM domain-containing proteins
127167801 (sltm)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
SAP
RRM_5
Motif
Other DBs
NCBI-GeneID:
127167801
NCBI-ProteinID:
XP_050970004
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All DBs
Position
7:31985252..31997001
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AA seq
986 aa
AA seq
DB search
MASGAISAETKKITDLRVVDLKSELKRRNLDVTGVKNTLIARLKQAIEDEGGDPDNIEIT
VSADTPTRKHSKSKGKKTDLDADTTMEEESFSKETEEEESEKDVTDTDDATRDNSKTFSC
EDGLAEPEAEAGVEPDLEAEAEAEPEAEPDPDAEIEAEREAETEVPAMEALESEAAPEPI
KEVEDDNISVTIQAEDAITLDVDGDDLLETGKHVKLPDSEADKGCEEPEATAEMGQETDS
LTEAIDGHKDGKRDDGLMSDAGKKDSREASKKGETGDKEKDSGKKGPSSTGATGQAKSSS
KDRDGKTAKDDKGSGSSSTSSTRNLWVSGLSSNTKAADLKNLFGKYGKVFSAKVVTNARS
PGAKCYGLVTMSSSAEVARCISHLDRTELHGQQISVDRVKTDPFKKDFSKKEGEDKTSSS
KISGEKRTPTGAKTSSKTPVSSKKEEKKSDKPSEKDNKDVKKQDSKTSKSDAPSSNSGAD
AAKKDDKKHGRKSPGNMMVIDQAKGEQNFNKSRPPFRRGGRFDKPCPPNMMNRRPRGFIP
PEEMEKGRPMPNKGGNKDILPFEKMKEQRMRERMVRMERVRRAMELRRRREVAERERRER
ERIRIMREREERENLMRERQRLEVERQKLERERMERERLERERIRIEQERRKEAERLARE
REELRRQQEQLRYEQEKRNNLKRGRDVDQRREDPYWNSGKKMQNEPEGRISQGGDYNNRQ
QNRFNDFNPRDRNRYQQTSAVQSNNFDRRNRFDGEPESKKNRPAPRREGSGFERYPKNFE
TVRRAEPPPPPRAELRDSDRREIRDRDERRQVSMPDRPAGGRAPPPAIPHSRTPRDGSHA
GWKNDGGMNTKQGDVRAVRMRPERPGREGPGPAMRGVSTASRGRTSFNSRDGGRPVVMGD
QQHFGSGRQVVVERHGRDQGPRKDWHGAGGSQSGGFTDNHRMGDSRPGMMAPHSSHSSSG
MNRIVQITNVPMAGGSGGFKPFKGRF
NT seq
2961 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcgggggccatttcagcagagactaagaagattacagatttacgtgtggtagac
ctcaaatcagagctcaaacgaagaaatttggatgttactggggtaaaaaacacactcatc
gcaagactgaagcaggcaatagaagatgaaggtggagatccagacaacattgaaatcacc
gtatcagctgacacacccacaagaaaacacagcaaatctaaaggaaagaagaccgacctg
gatgccgacaccaccatggaagaggaatccttctctaaggagactgaggaagaggaatct
gaaaaagatgtaactgatactgatgatgctactcgtgacaattctaaaaccttctcctgt
gaagacggccttgcagagcccgaggctgaggcaggagtggagcctgatcttgaggctgag
gcggaagcggaacctgaggccgagcccgatccagatgcggagattgaggctgagagagaa
gccgagactgaagtgccagcgatggaggccttggagagcgaagctgctcctgaacccata
aaagaagttgaggatgacaatatatctgtcaccatccaggccgaagatgccatcacgctg
gatgtagatggcgacgatctcctggaaacaggtaaacatgtgaaacttccagattctgag
gcagacaagggctgcgaagagcctgaggccactgctgagatggggcaggagacagactcg
ctgaccgaagcgatagatggccacaaggatggtaagagagatgacgggctgatgtctgac
gccggcaagaaggacagcagagaggcctcgaagaaaggagaaacgggagacaaggaaaag
gattctgggaagaaaggcccctcatcaactggggcgacaggtcaagcaaagagctcttca
aaagacagagatggaaagactgcaaaagatgacaaaggaagtggcagcagcagtaccagc
tctactcgcaatctgtgggtgagcggcctgtcgtccaacaccaaagcagctgatctcaag
aacctctttggcaaatatggaaaagtttttagtgccaaagtggtcaccaatgctcgtagc
ccaggagccaagtgttatggattggttaccatgtcatccagcgcagaagtggccaggtgc
atctctcacctggaccgcacagaactccatggacagcagatatctgtggacagggtgaaa
actgacccattcaaaaaggatttctctaagaaagagggagaagacaagaccagttccagt
aaaatttctggagagaaacgtactccaactggagcaaaaacctccagcaagacaccggtt
tcatctaagaaggaggagaagaaatcagacaaaccatctgagaaggacaacaaagatgtc
aaaaaacaagactccaaaaccagcaaatctgatgcaccatcttccaattcaggtgcagat
gcggcaaagaaagatgataagaaacatggacgaaagagtccaggcaatatgatggtgatc
gaccaagctaaaggagagcagaacttcaacaaatctcgtcctcctttcagaaggggtggg
aggtttgataagccttgtccacccaacatgatgaacagacgccccagagggttcatacca
cctgaagagatggagaaaggccgtcccatgcctaacaaaggtggcaacaaagacatcctg
ccttttgagaagatgaaggaacaacgtatgcgtgagcgcatggtcaggatggaacgcgtt
cgcagggctatggaactgcgcagacggcgtgaggtagcagagcgagagcgccgggagagg
gaacgcatccgaattatgcgtgagcgtgaggaacgggagaacctgatgagagagcggcaa
aggctggaggtggaaaggcagaaactggaacgtgagcgcatggagagagagagactggaa
cgggagcggatccgtatcgagcaggagcgacgcaaggaagcggagcgtttggctcgtgaa
cgtgaagagctgagacgacagcaggaacagttgcgttatgagcaagagaaacgaaacaac
ttaaagaggggacgtgacgttgaccaaaggagagaagacccgtactggaatagtggtaaa
aagatgcagaatgagccagaggggcggatcagtcaaggcggagattacaacaatcgacaa
cagaaccgcttcaatgatttcaaccccagagaccggaaccgataccaacagacatcagct
gtgcaatccaacaactttgatagacgcaaccgctttgacggggaacctgagtcgaagaag
aatcgacctgctccgcgccgtgaaggttctgggtttgagcgctatcctaaaaactttgaa
accgtgcggagagcagaaccaccacctccgccccgtgcagagttgcgagacagcgatcgc
agagagatccgcgaccgtgatgagcgcagacaggtgtccatgcctgatcgaccagctggt
ggcagagcgccgcctcctgccatcccccactcccgtacccccagagacggcagccacgct
ggctggaaaaatgatgggggaatgaacacaaagcaaggagatgtcagagcagtgcggatg
cgtccagaacgtccaggcagagagggtcctggacctgccatgagaggggtgtccacagcc
agccgtggcagaaccagcttcaacagccgggacggcggcagacctgtggtcatgggagac
cagcagcacttcggcagtggcagacaggtggtggtggagcggcatggacgcgatcagggc
cccaggaaagactggcacggggcagggggctcacaaagcggaggattcacagataaccac
cgaatgggagacagtcggcctggcatgatggcaccacactccagtcattcctcttctggt
atgaacagaattgtgcagatcactaatgttcccatggccggtggcagcggaggattcaag
cccttcaaaggaaggttctag
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