Labeo rohita (rohu): 127167923
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Entry
127167923 CDS
T09007
Symbol
si:cabz01101003.1
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase CYLD
KO
K08601
ubiquitin carboxyl-terminal hydrolase CYLD [EC:
3.4.19.12
]
Organism
lroh
Labeo rohita (rohu)
Pathway
lroh04217
Necroptosis
lroh04622
RIG-I-like receptor signaling pathway
lroh04625
C-type lectin receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09140 Cellular Processes
09143 Cell growth and death
04217 Necroptosis
127167923 (si:cabz01101003.1)
09150 Organismal Systems
09151 Immune system
04622 RIG-I-like receptor signaling pathway
127167923 (si:cabz01101003.1)
04625 C-type lectin receptor signaling pathway
127167923 (si:cabz01101003.1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
lroh01002
]
127167923 (si:cabz01101003.1)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lroh04121
]
127167923 (si:cabz01101003.1)
Enzymes [BR:
lroh01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
127167923 (si:cabz01101003.1)
Peptidases and inhibitors [BR:
lroh01002
]
Cysteine peptidases
Family C67
127167923 (si:cabz01101003.1)
Ubiquitin system [BR:
lroh04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
127167923 (si:cabz01101003.1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CAP_GLY
UCH
Albumin_I_a
Motif
Other DBs
NCBI-GeneID:
127167923
NCBI-ProteinID:
XP_050970300
LinkDB
All DBs
Position
7:complement(60122179..60135216)
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AA seq
952 aa
AA seq
DB search
MSGDSHHSRRRRYPKMYMVASDHKVQDHLEGTIRLQRGQLCHQQEGGGHRSARGDHLWVK
VIDNGCVVKVERQVLNEVPADLAGLLEPVPDLEIRVKLLSRTQFLQRMTALPLGSEVRVI
WNRSQSELAEAELRYRGPLTRGSSAVYFGIQLKGWAAGRGKGNGSYKGHQLFTCPDGCAM
FLPVSDLTLPRSSRGGSSGDNDRHPHQSNHAASANGQNPVNILSRAAESSPNPGVPQPFA
VGQRVCFTRDECVQRGSVQFCGPLSHRAPSAIYVGVLLDQPGGSWDGYYKNTKLCSIPSP
DFGALLPLSKVTPESRSERSPLAVTSPKPLPQLPPLPVSNKAALQPPSPSKDPSQPTTTP
ANRPLIQPSMLVTAKKALQPPSSSVPKAALKPPPLNTPKPALLPPVVLPNKPQAPPMSPP
IDQSRSSNGFHNLLSPAVAEQKAEFSTWLEVGSMVEVNDPPLFGVIRWIGQINNIPEPVA
GIELDQELSAATDGSYLGERHFRCPANKGLFVKLRNCRRDSRFPEPELPINQVDRCNSIA
FANWSSKRVEDHTPPLSGPDARLTYEGFKKGIQGHLNSCYLDASLFSIFSCCSSFDWLLF
WPSGPQNNPISHSAQDLLRCEIVNPLRRYGYVCASKTMALRKLLKEETADSGFTNEEKDP
EEFLNQLFLLLQVEPLLKIRSVSQKAQECFIYQLFPPSVSPSSPLVSPASPGLSPVLSPS
AGLLRVSSVQALLESSFMHSGLKLTEAPSCLPLLMPRFGKEFKMFDAILPSLSLDITDLL
DETLRQCSICQSVAQWECLQCYEDVDITPGQLKQYCNTCNTQVHTHKKRQTHRPVEVRVP
RGCWEGPVHGARQLMDLFAVTCIETSHYVSFVKHGPQPTDWLFFDSMADREGGENGFNVP
QVRACPEVGRYLSLSVDEIARLDVASLRDPVRRLLCDAYMCLYHCPQLSLYK
NT seq
2859 nt
NT seq
+upstream
nt +downstream
nt
atgtccggcgactcgcatcacagtagaagaagacgctaccccaaaatgtacatggtcgcg
tccgaccataaagtgcaggaccacctggaaggaaccattcgcctgcagcgggggcagctg
tgtcatcagcaggagggagggggacacaggagcgcgagaggtgatcatttgtgggtgaag
gtgatcgataatggctgcgtggtgaaggtggaaaggcaggttctcaatgaagtcccggct
gatctcgccggtctgctcgaacccgtccctgacctcgagatccgcgtcaaactgctgtcc
aggacgcagttcctgcagcgaatgaccgctttgccgctgggatcagaggtgcgggtcata
tggaatcgcagccaatcagagctcgccgaggcggagcttcgttaccgcgggccgttgacg
agaggaagctccgctgtttattttggaattcagctaaaaggatgggcagcaggtcgcggt
aaaggcaacggaagctataaagggcatcagttgttcacgtgtccggacggctgcgccatg
ttcctcccggtcagtgacctcacgctccctcgatcgtcccgcggcggcagctccggtgac
aacgaccgccatccgcaccagtcgaaccacgcggcgtccgctaacggccagaatcccgtc
aacatactgtcacgtgctgcggagtccagccccaatcccggcgtgccgcagccgttcgcc
gtgggacagagggtctgtttcactcgggacgagtgcgtccagcgcgggagcgtccagttc
tgcgggcccctgtctcaccgcgccccgtctgcaatttatgtgggagttttactggatcag
ccaggaggatcgtgggatggatattataaaaacaccaaactgtgctccatcccgtcgcct
gactttggagctttgcttcctctctctaaagtaaccccagaatctcgatctgaacggtct
cctctggctgtgacgagtcccaaaccgcttcctcaactgccgccgctgcccgtctccaat
aaagccgcccttcagcctccgtcacccagcaaagacccgtcacagcccacgacgacgccc
gcgaaccggccgctcatccagccgtccatgctggtgacagctaaaaaagccctccagcct
ccgtcctcctccgtccctaaagccgctctaaaacctcctccgctcaatacacccaaacct
gctctgctgcctcccgtggtcctgcccaacaaaccacaggccccgcccatgtccccgccc
atcgaccagtcccgctcctccaacggattccacaacctcctgtctccagcggtcgctgag
cagaaggcggagtttagcacgtggttggaggtgggatccatggtggaggtgaacgacccg
ccccttttcggagtcattcgctggattggacaaatcaacaacatcccggaaccggtcgct
ggaatcgagctggatcaggagttgtccgccgccacggatggcagttatctgggtgaacgt
cacttccgctgtcccgctaacaaaggcctcttcgtcaaactgaggaactgcagacgcgac
tccaggtttccggaacctgaactgcccatcaatcaggtcgatcgatgcaactcaattgcg
tttgctaactggagcagtaagcgtgtggaggatcacacgcctccgctgtcgggtccagac
gcccgtctgacatacgagggcttcaagaaaggcattcagggacacctgaactcctgctac
ctggacgcgtctctcttcagtatattctcgtgctgcagctcgttcgattggctgttgttt
tggccgtctggtcctcagaacaatcccatcagtcacagcgctcaggatctgctgcgctgc
gagatcgtcaatcctctgcgccggtacggatatgtgtgtgccagtaaaaccatggcttta
cgcaaactacttaaagaagaaaccgccgattcaggatttaccaatgaggagaaagatcca
gaggaattcctcaaccagcttttcctgcttctccaggttgaaccgcttctgaagatcagg
tctgtgagtcagaaggcgcaggagtgtttcatctatcagctctttcctccgtctgtttct
ccgtcgtctcctctggtttctcccgcttctcctggtctgtctccggtcttgtctccgtct
gcggggctcctgcgtgtgtccagcgttcaggcgttactcgaatcctccttcatgcactcg
ggactcaagctcacagaggctccgtcgtgtttgccgctcctcatgcccagattcggcaaa
gagttcaagatgtttgacgccatcctgccctcgctgagcctcgacatcaccgacctgctg
gacgagactctgcgtcagtgcagtatctgtcagtcggtggcgcagtgggagtgtctgcag
tgttacgaggatgttgacatcacacctggacaattaaaacagtactgcaacacctgtaac
acacaggttcacacacataagaagcgtcagacgcacaggccggtggaggtgcgggtgccg
cggggctgctgggaagggccggttcacggggcccgtcagctgatggatctgttcgccgtc
acctgcatcgagacgagccactacgtgagcttcgtcaaacacggaccccaacccaccgac
tggctcttcttcgacagcatggctgacagagagggaggagagaacggctttaacgtgccg
caggttcgagcatgtccggaggtcggccgttatctgagtctgtccgtggatgaaatcgct
cgtctggacgtggcgtcgctcagagatcccgtccgccgcctactgtgtgacgcctacatg
tgtctctaccactgtccacagctctctctctacaaataa
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