Labeo rohita (rohu): 127168062
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Entry
127168062 CDS
T09007
Symbol
grin2ab
Name
(RefSeq) glutamate receptor ionotropic, NMDA 2A isoform X1
KO
K05209
glutamate receptor ionotropic, NMDA 2A
Organism
lroh
Labeo rohita (rohu)
Pathway
lroh04020
Calcium signaling pathway
lroh04080
Neuroactive ligand-receptor interaction
lroh04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
127168062 (grin2ab)
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
127168062 (grin2ab)
04082 Neuroactive ligand signaling
127168062 (grin2ab)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
lroh04040
]
127168062 (grin2ab)
Ion channels [BR:
lroh04040
]
Ligand-gated channels
Glutamate (ionotropic)
127168062 (grin2ab)
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
NMDAR2_C
Lig_chan
Lig_chan-Glu_bd
ANF_receptor
SBP_bac_3
Motif
Other DBs
NCBI-GeneID:
127168062
NCBI-ProteinID:
XP_050970544
LinkDB
All DBs
Position
1:42870433..42984004
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AA seq
1448 aa
AA seq
DB search
MMGAVVWLMVLWALLGWSQAAEKPPSLSVAVILGQTPTVSETALRPARGIGAPLDVTVLS
VQVNQTDPGSMLTHLCELMSRQRLHGLVYGDGTDQEAVAQMLDFVSSQTSMPILGIHGGA
AMTMAEKDASSSFFQFGASLQQEALLMLAIMEEYDWHVFSVVTTKFPGFQEFIATVRVTV
DHSFVRWDLQSVVTLDGVGEPEDRAHVQLKRIQSPVILLYCSKDEAALVMEEARSLGLTG
AGFVWIVPSLTTGNLEHTPEAFPTGMISVAYDEWDYPLEKRVQDAVGIISSAAATMFREE
GRIPDGTASCYGQSEKPEVPANALRRYMMGVNLGGRDHSFMDDGYQVNPKLVVIVLNTER
EWEKMGRWENHSLKLKFPVWPRYNSFGDMDADENHLSIVTLEERPFVIVDDVDILTGTCM
RNSVPCRKHIKDNTTEGSYIKQCCKGFCIDILKKIARNVKFTYDLYLVTNGKHGKKINNV
WNGMVGEVVYKKAVMAVGSLTINEERSEVIDFSVPFVETGISVMVSRSNGTVSPSAFLEP
FSASVWVMMFVMLLIVTAIAVFLFEFISPLGFNRNLAQGKDPHGPSFTIGKAIWLLWGLV
FNNSVPVQNPRGTTSKFIVSVWAFFAVIFLASYTANLAAFMIQEEFVDQVTGLSDRKFQS
PYSYSPPFRFGTVPNGSTERNIRKNYPDMHQYMVKYHQTGVQDALVSLKTGKLDAFIYDA
AVLNYMAGRDDGCKLVTIGSGYIFATTGYGIALQKGSYWKRLVDLAILGIIGDGEMEELE
AQWLTGICHNEKNEVMSSQLDVDNMAGVFYMLAAAMALSLITFVWEHLFYWRLRYCFTGL
CSGRPGILFTISRGIWSCIHGVHIEMKKSPELDFSPQANMLHLLKSAKEITTLGVTSPKR
PVSSILRPTTGLLEFIDGAKGNNLAQKNAPYSNASTMLSNRHKEPLNNTLLPGQRALSLT
DAQPGVAGNGGSGGGGEAARPAPASKPRALWKKSVETLRQNQGPGGNSPPSAPQASETLP
MKSQRYLPEDAPARSDISDCSGRVDLQKQHKLKETLRKRNRLPRDLSDVELSTLRSQPSQ
QSNHSAQIYSQSSQGSQIYTIDSIDQEHGLHYPDIFSDHRDNKLRPSSSSEQQQPILQLN
SSLLSQAHEPDVMQTAIAKDKKYNTYGKPGGAGTIAGGPGSTQDPRQTHCRSCLSKVSSY
SGLYTVRSPQYRCDACLHSANLYDISEDQFLHPDGRGTGGGSVDRAFSPFLPQPDASFTA
YLPQSDQEGDGLISHYQNEGVIIRQHSYENLPQKSSSRRVSLQDNTPYANIPSATLIPDK
PPKNQAVHLNHTLAGVGVSGLGIGRRSKSMYPARPTENPFLQTLRDDQRLAHGRSSTDIY
KQLVPLTLGQADGNVLGVGMPTPDLYYPEHVMPYVAPPPVGTYTAPRAMSAGGARRVYKR
MPSIESDV
NT seq
4347 nt
NT seq
+upstream
nt +downstream
nt
atgatgggagctgtagtctggttgatggtgttatgggccttgctgggttggtcgcaggcc
gcagagaagcctccatccctgagtgtagctgtgatactgggccaaacccccaccgtatcc
gaaacagccctgcgtccggctcgtgggataggcgcgccactggatgtgactgttctcagc
gtccaggtgaaccagacggacccaggaagcatgcttacacacctgtgtgagctcatgtcc
cgacagagactgcacgggctggtctatggagacggcacagaccaggaagctgtggcacag
atgctggactttgtttcctctcagacttccatgcccatactgggaatccacggcggcgct
gccatgacaatggccgaaaaggatgccagttcttcatttttccagtttggggcctccctc
cagcaggaggcgctgttgatgcttgctataatggaggagtacgactggcacgtcttctcg
gtggtcaccaccaagttcccaggtttccaggagttcatagccaccgtccgtgtcacggtg
gaccacagcttcgttcgttgggacctccagagcgtagtgacgctggacggcgtcggagaa
cccgaggaccgagcccacgtgcagcttaaacgcatccagtcgcccgtcatcctcctctac
tgctccaaagatgaagcggcgttggttatggaggaagcccgttcgctagggctcacgggg
gctggctttgtgtggattgttcctagtctgacgacaggaaatctcgaacataccccggaa
gcctttccgacgggtatgatatctgtggcgtacgacgagtgggattatcccctggagaaa
cgtgtacaggacgctgtgggaattatcagttctgcagccgctaccatgttcagagaggaa
ggtcggatacctgacggaacggctagctgctacggccaatcagagaagccggaggtgcca
gcaaatgctctgcgcaggtatatgatgggagtcaatttagggggtagagatcattcgttc
atggacgatggctaccaagtcaatcccaaactggttgtcattgttctgaacacggagagg
gaatgggagaagatgggacgatgggaaaaccactcactgaaattgaagtttccagtttgg
ccccgttataactcgttcggagacatggacgctgatgagaaccacttgagcattgtgact
ctagaggaaagaccctttgttatagtggacgatgtggacattcttactggcacttgtatg
cgtaactctgtaccttgcaggaaacacattaaagataataccacagagggctcctatatc
aagcagtgctgcaagggcttttgtatagacatcctgaagaagattgccagaaatgtaaag
ttcacctatgacctgtacctggtcacaaatggcaaacatggcaagaagatcaataatgtg
tggaacggcatggtgggggaggtagtctataaaaaggctgtaatggctgtgggctcactg
accataaatgaagagcggtcagaggtcatagacttctctgtcccatttgtcgagacaggc
atcagcgtgatggtgtcgcgtagcaatggaacggtgtcgccctctgcgtttctagaaccc
ttcagtgcttcagtgtgggttatgatgtttgtcatgttactcatcgtcacagcaatcgct
gttttcctctttgaattcatcagtccgctcggtttcaatagaaacctggcacagggcaaa
gaccctcatggaccctccttcaccattggcaaggctatctggctgctgtggggtctggtg
ttcaacaactctgtcccagtacagaaccccaggggcactactagtaaatttattgtgtcc
gtatgggcctttttcgctgtgatcttcctggccagctacactgccaacttggctgccttt
atgatccaggaggagtttgtggaccaagtcacaggccttagtgacagaaagtttcagagt
ccttattcctattcaccgccgtttcgcttcgggaccgtgcctaatgggagcacagagcga
aacatcaggaaaaactacccagacatgcaccagtacatggtgaaataccatcagactgga
gttcaggatgcattggtcagcctcaagacgggtaaactggatgctttcatatatgatgcg
gctgtgctcaactatatggcggggcgtgatgatggctgtaagctagtaactattggcagt
ggctacatctttgccacaacaggatatggcattgccctgcagaaaggatcctactggaaa
cggctggttgaccttgctatccttgggatcattggagacggtgagatggaggagctggag
gcccagtggctgactggtatctgtcataatgagaagaatgaagtgatgagcagtcagctg
gatgtggataatatggctggtgtgttctatatgcttgcggcggccatggcactgtcgcta
attacttttgtctgggagcacctcttctactggaggctacgttactgtttcactggtctc
tgttctggtcggccaggaattctcttcactatcagcagggggatttggagttgtattcac
ggtgtccatattgagatgaaaaaatccccagaattggacttcagccctcaggccaacatg
ttacaccttctgaaatcggctaaagagatcaccacccttggagttacctcgcccaagcgg
cccgtgagtagcattctccgtcctaccacgggcttgctggaatttatagatggagcaaaa
ggcaacaacctcgcccagaaaaatgctccctatagcaatgccagcaccatgctcagcaac
cgtcacaaagagccacttaacaacactctgttgccagggcaacgtgccctaagcttgacg
gatgctcagccaggtgttgctggaaacggtggctcgggaggcggaggtgaggctgctcga
cctgctccagcctccaagccgcgtgctctgtggaagaagtctgtggagactctacggcag
aaccaaggacctgggggaaattccccaccatctgccccgcaggcctccgagactctacct
atgaagagccagcggtacctgcctgaagacgcacccgcccgctcggatatttcagattgc
tccggccgggtggacttgcaaaagcagcacaagttgaaagaaacgcttcggaaacggaac
cgcctaccgcgggatctgagcgacgttgagctttcaactctgcgaagccaacccagtcag
cagagcaaccacagtgctcagatctactctcagagcagccaggggagtcagatttatacc
atcgactccatcgatcaggagcacgggctgcactacccagatatcttcagcgatcaccgt
gacaacaagctccggccttcctcttcctccgagcagcagcagccaattctgcagctcaac
agcagtctgctctcccaggcccatgaaccggacgtgatgcaaaccgccatcgcaaaggac
aagaaatacaacacgtacggaaagcctggcggcgcagggaccatcgccggcgggcctggt
tctactcaggatccacgacagacacactgccgcagctgcctgtcgaaagtgtccagttac
tctgggctttacactgtacggtcccctcagtatcgctgcgatgcctgtctgcactccgca
aacctgtacgacatcagcgaagaccagttcctccatccagatggacggggcactggtggc
ggaagtgttgacagggccttctctccttttctccctcagcctgatgcttccttcacagcc
tatcttccccagagtgaccaagagggcgacggtcttattagtcactaccagaacgagggc
gtaatcatccgccagcactcgtacgagaacctgccccagaagagttcgtcacggcgggtc
agtctgcaggacaacacgccgtatgccaacattccctcggcgactctcatcccggacaag
cccccaaaaaatcaggcggtccacctaaaccacacgctcgccggggtgggcgtcagcgga
ctcgggatcggccgtcgcagcaagtcgatgtatccggcacgcccgacggaaaacccattt
ctccagacgctccgcgacgaccagcgtctagctcacggccgcagctccacagacatttat
aagcagctcgtgccactcacattaggccaggccgatggcaatgtgctcggcgtggggatg
ccgacccctgacctctattaccccgagcatgtcatgccttatgtagcccctccccctgtc
ggcacatacaccgctcccagggcgatgagcgctgggggcgctcggcgtgtctacaagagg
atgccgagcatcgagtctgatgtctga
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integrated database retrieval system
