Labeo rohita (rohu): 127168072
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Entry
127168072 CDS
T09007
Symbol
bmal1b
Name
(RefSeq) basic helix-loop-helix ARNT like 1b isoform X1
KO
K02296
aryl hydrocarbon receptor nuclear translocator-like protein 1
Organism
lroh
Labeo rohita (rohu)
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lroh03000
]
127168072 (bmal1b)
Transcription factors [BR:
lroh03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
127168072 (bmal1b)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAS_11
PAS
PAS_3
HLH
PAS_9
Per3-like_PAS-A
PAS_4
bHLH_INO2
PAS_2
bHLH_NCOA
PLU-1
bHLH_NPAS4
PAS_8
DUF6779
Motif
Other DBs
NCBI-GeneID:
127168072
NCBI-ProteinID:
XP_050970570
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All DBs
Position
7:complement(7695816..7726806)
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AA seq
646 aa
AA seq
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MADQRMDISSTMNEFMSPSSTDLISSSMGTPGMDYTRKRKGSITDYQIDGFSFESESSWM
RFLIPSSQLTQSSESERDSMDIDKDKQLVRVDQQIKNAREAHSQIEKRRRDKMNSFIDEL
ASLVPTCNAMSRKLDKLTVLRMAVQHMKTLRGAANPYTEANYKPAFLSDDELKHLILRAA
DGFLFVVGCDRGKILFVSESVYKILNYSQNDLIGQSLFDYLHPKDIAKVKEQLSSSDTAP
RERLIDAKTGLPVRTDITPSPSRLCSGARRSFFCRMKCNRPLVKMEDKDFPSTCSKKKAD
RKSFCTIHSTGYLKSWPPTKMGLDEDNEPDNEGCNLSCLVAIGRLHPHIVPQPMNGDIRV
KPTEYVSRHAIDGKFVFVDQRATAILAYLPQELLGTSFYEYFHQDDIGHLAECHRQVLQM
REKINTNCYKFKIKDGSFITLRSRWFSFMNPWTKEVEYIVSTNTVVSGSSLDGAEPGYPQ
LTASPQSMDSVLTAGDSTGKTVPGIPGGTRPGAGKIGRMIAEEVMEIQRIRGSSPSSCGS
SPLNITNSTPPPDTSSPGGRKISNGGTPSDIPSAGMVSGQDSIGYPYSNSSILSDNSHIG
IGDIMDEPGSSSPSSDEAAMAIIMSLLEADAGLGGPVDFSDLPWPL
NT seq
1941 nt
NT seq
+upstream
nt +downstream
nt
atggcagaccaaagaatggacatctcctccacgatgaatgagttcatgtctcccagttcc
actgatctgatcagcagctccatgggaacgccgggcatggactacacccgcaaaaggaag
ggcagcatcaccgactatcaaattgatggattttctttcgaatctgagtcttcatggatg
agattcctcatcccaagctcacagctcacacagtcctctgagagtgaacgggacagtatg
gacatagacaaggacaaacaacttgtaagggtcgatcagcagattaagaatgcaagggag
gctcacagtcagatagagaagagacgcagagacaagatgaacagctttattgatgagctg
gcttcattagtgcctacctgcaatgccatgtcccgcaagctggacaaactcacggtgctg
cgcatggcggtccagcatatgaaaacacttcgaggtgctgcaaacccttatactgaagct
aactacaagccagcctttttatcagacgacgagctgaagcacttaatattaagggctgct
gacggttttctgttcgttgtgggctgtgatcggggaaagatcctttttgtgtcagagtct
gtctacaaaattttaaattacagccagaatgacctgattggccaaagtttgtttgattat
ttgcatcctaaagacattgcaaaagtcaaagagcagctctcgtcatctgacacagcccca
cgcgaaagactcatcgatgctaaaactgggctgccggtcaggacagacatcactcctagt
ccctccagactgtgctcgggggcccgacgctcgttcttctgcagaatgaagtgcaacagg
ccccttgtcaaaatggaagacaaagattttccctcaacttgctctaaaaagaaagctgat
cgcaagagcttctgcaccatccacagcactggctatctgaagagctggcctcccacaaag
atgggcttagatgaagacaatgagcctgataatgaaggctgtaacctcagctgcttagtg
gccattggccgattacatcctcatattgtccctcaacccatgaacggggacatccgggtg
aagccgacagagtatgtctcgcgccatgccattgatgggaagtttgtctttgtggaccaa
agggccacagccattcttgcttatctacctcaagagctgctgggcacgtcgttctatgag
tatttccatcaggatgacatcggacatcttgctgaatgccatagacaggtactgcagatg
agagagaagatcaacactaactgttacaagttcaagattaaagatggttcttttataacg
ttaagaagtcgctggttcagtttcatgaacccttggaccaaagaagtagaatacatcgtc
tcgactaataccgtcgtctcaggcagttctcttgatggagcagaacctggttatcctcag
ctcaccgcctccccccagagtatggatagcgtccttacagctggtgacagcacagggaag
actgtccctggaatccctggaggcacaagacccggagcaggaaagatcggccgcatgatt
gctgaggaagtgatggagatacagaggataagaggctcatccccatctagttgtggttca
agcccccttaacatcaccaacagcacccctcctcctgacacatcctcaccggggggaaga
aagatttcaaacggtggaactccttcagacattccttcagcagggatggtgtcaggccag
gacagcataggatatccttactctaacagctcgattttaagtgataattcacacatcggt
atcggtgacatcatggacgagccgggctccagcagccccagcagtgatgaggctgccatg
gccatcatcatgagcctgctggaggcggacgcaggtctgggaggtcccgtggactttagt
gacctgccctggccgctttga
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