Labeo rohita (rohu): 127168157
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Entry
127168157 CDS
T09007
Symbol
arhgef11
Name
(RefSeq) rho guanine nucleotide exchange factor 11 isoform X1
KO
K12331
Rho guanine nucleotide exchange factor 11
Organism
lroh
Labeo rohita (rohu)
Pathway
lroh04270
Vascular smooth muscle contraction
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09150 Organismal Systems
09153 Circulatory system
04270 Vascular smooth muscle contraction
127168157 (arhgef11)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lroh04131
]
127168157 (arhgef11)
Membrane trafficking [BR:
lroh04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
127168157 (arhgef11)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RGS-like
RhoGEF
PH_16
PDZ
PDZ_6
RGS
PDZ_2
Pept_S41_N_bact
Motif
Other DBs
NCBI-GeneID:
127168157
NCBI-ProteinID:
XP_050970707
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All DBs
Position
7:complement(58031100..58065801)
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AA seq
1432 aa
AA seq
DB search
MSVRHPTSTLDSPFAAWLSSLTLGDSERRSSPGQQRETLSDLSSDNAGTGLVQRCVVVQR
DNLGFGFTVCGERIKLVQNVRPGGAAVKAGVQEGDRIIKVNGSLVSSMSHQEVVKMIKSG
TYVALTLQGPPPSVASVPLQPLPTDLLPNHRTAPGGEAPPPPPTPPTGSSTPTQRITGPK
PLQDPEVQKHATEILRKMLEQEEAELQNLLEEQSRNPSPSLEERIESAKRRANQVRVKIQ
RDVDGTRSEAVANYLIAGEGRLSMDSSEGDFEVCESPFSSPSSFLRNPQLCRQGSDTHTS
DSGGKMQIIGPEEEDEDDGYSINEMDGPFQDIELLKSRPAHMTVFMRYVFSQLLDPNPLL
FYLSVEAYLGSSTKDARSLAPQICSHFLDHDAPLKIKVREEFLTDIENRLHAQEDIRGPL
SELQQQVLPDIQDQLQDYRNKQMMGLGSLFGESDLQQLDGDPAKERQVVDKQVVALWEIL
SKHEEDRSSPLASAVHLYLRHSGIKLRDSKVFPGLISEKEKWLPFFPKSKKLSSTKREKD
GDDKKRNPILKYIGKPRSTSQSTFHVPLSPTEVRPGSVRNIIQQFENNSDSIEDGDIEGQ
RLSSSSFGEDSMDSPTISVRLARSESLKAQGEGRRRGGGAGAESVPRSRSDVDMEDCDER
DGPGLRSLHHSASSSASSSSARSLENPTPPYTPRSQRRIVDTPVPLLPDEDVIDSQNWQE
TVEPHVLASLTSREIDRQAVIYELFTTEVSHLRTLRVLDLVFYQKMQSVLSPEELSCIFL
NLRQVCELHASLCEAMKKRRESPIVQGIGDVMLATFEGEAGEQFEEQVSHLCSQQSQALE
LIKNKQRKDPRFAHLIQECETSPHCRRLQLKDLLVAEMQRLTKYPLLLDNIIKYTETSSP
DLQLLQRAQARCRGILQAVNEVVRETEHRHRLSQYQRRLDLTPLERLANPVAAQFKNLDL
TTKRMIHEGPLTWKVSKDKAIEVQALLLSDLLVLLQRGPDERLILRCPSRSLGGGGATDL
KIPFCPIVRLDFALVRLVATDNKALYVISTSESQIYELVAGTSSEKNTWKDLLEKTITAA
AQVARLSKQGSPAPSSDARSSANPLDVSESPVSLEQDSASDDECALTPDTTPTDGSDARL
HEDRDGIQNKAGVAEAALQDVETLRHLIFRDLEDGWSQDSDDTPTNETANERSPFTDRPG
AELSDPAPSESPSQWEEERVETPPMEVLQPPVQVVRKVLGAGCSLPDNITNDVTAGQSSR
DGGNMFYLVLPKEQSSAHTDESSTDELKDSDASDSIHQTKNMLSSSFINEEEEQETPCLS
PTDQSLTETLSQRERLCQSQLSIRQHVIKNVDEIFNTMEELMRKLQHLRDIEADHYKLLK
KLKKPLPADKLSSDLVYESPRAVRMPSLDRGAGDGKEGVSEPAQPEIQSTGF
NT seq
4299 nt
NT seq
+upstream
nt +downstream
nt
atgagtgttcgacatccgacctccacgctggacagtccttttgctgcttggttgagcagt
ttgacgttaggagactcggagcgcaggtcttctcctggccagcagagagaaacgctgtct
gatctctcctcagacaatgcagggacaggtttagtccaaagatgtgtggttgtgcaaagg
gacaatctggggtttggcttcaccgtctgtggtgagagaatcaaactagtgcagaatgtt
cggccaggtggagcggcggtcaaggctggagttcaggaaggagaccgaatcattaaggtc
aatggttcattggtttcctccatgtctcaccaggaagttgtaaagatgatcaaatccggg
acgtatgtggcgttgactcttcagggcccgcctccttcagtcgcgtctgtcccgcttcag
cccctccctactgacctcttgcccaatcacaggactgcgccgggcggcgaagctccgcca
cctccaccaacgccacccacaggaagcagcaccccgactcagagaatcacaggacccaaa
ccattacaggaccctgaggtgcagaaacacgccacagaaatcctccgaaagatgctggag
caggaggaggcagagctacagaaccttctggaggaacagtctcgaaatccctcaccttca
ttagaggagcgaatagaaagtgccaaacgaagagccaatcaagtacgagtgaagatccag
cgggatgtggatggcactcgatcagaagctgtcgctaactatctcatagccggagaaggt
cggttatcgatggactccagtgaaggagacttcgaggtgtgtgagagtcccttctcctcc
ccgtcctccttcctcaggaaccctcagctctgccggcagggatccgacacgcacacctcg
gactcgggaggaaagatgcagatcattggcccggaggaagaagatgaggatgatgggtat
tcgattaatgagatggacgggccatttcaggacatcgagctgctgaagagtcgtcctgct
cacatgacggtgttcatgagatacgtattcagtcaactactggatccaaacccgctgttg
ttttatctgtctgtggaggcgtatctgggctccagcaccaaagacgcccgttcactcgcc
cctcagatctgctcacacttcctggaccatgatgcccctctgaagattaaagtgcgagag
gagtttctgacagatatcgagaatcgtctgcacgcacaggaggacattcgagggccgctg
tctgagctccagcagcaggtgcttccagacattcaagaccagcttcaagactacaggaat
aagcagatgatgggtctgggctctctgtttggagagagcgacctgcagcagttagacgga
gaccctgcgaaagagagacaggtggtggacaaacaggtggtggcgctgtgggagatcctg
tcaaaacatgaggaggatagaagttctccactagcatctgcggttcatctgtatctcaga
cactcgggcattaagctcagagactccaaagtgtttcctggtttgatctcagagaaggaa
aagtggcttccattctttcctaaatctaaaaagctgagcagcacgaaacgagagaaggat
ggagatgacaagaaacgaaatcccatcctgaagtacatcggcaaacccagaagcacgtct
cagtccacgttccatgttcctttgtcccccactgaagttcgacccggcagcgtgagaaac
atcattcagcagtttgagaataattcggactctattgaagacggtgatattgagggacag
agattgtcttccagcagcttcggagaggacagcatggacagtccgaccatatcggtgcgt
ttggctcgcagcgagtctttaaaagctcagggggaggggcgtcgacgaggaggcggggcc
ggggcggagtctgtccctcgttcccgtagcgatgttgacatggaggactgtgatgagagg
gatggtccgggactgagatcgttacatcacagcgcctcgtcttcagcatccagcagttcg
gcacgatcactggagaacccaacgccgccgtacactcctcgctctcagcgcaggattgtg
gacactccggtgcctctgttaccggatgaggacgtgatcgactcgcagaactggcaggag
acggtggagccgcacgtgctggcgtcgcttacctcacgagagatcgaccgtcaggccgtc
atctacgagttgttcaccacagaagtgtctcaccttcggacgctgcgggttctggatctc
gtgttttatcagaagatgcagagcgtcctcagtccagaagagctgtcctgtatcttccta
aacctgcgtcaggtctgcgaactacacgcgagcttatgtgaggccatgaagaagcgcagg
gaatcaccgatcgttcagggcatcggagacgtcatgctggccacattcgagggagaggct
ggagagcagtttgaggagcaggtgtctcatctgtgcagtcagcagagtcaagcgttggag
ctcatcaagaacaaacagcgcaaagaccctcgattcgcacacctcatacaggaatgtgag
accagtccacactgccggaggttacagctgaaggatctgctggtggctgaaatgcaacgc
ttgactaaatacccactgctgctggacaacatcatcaaatacacagaaacgtcgtctcct
gacctgcagctgcttcagagagctcaggcccgatgccgcgggattctgcaggccgttaac
gaggtcgtcagggagacggagcaccggcatcgtctcagccaataccagcgcaggctggac
ctgactcctctggaacggctggccaatcccgtcgctgcgcagttcaagaatctggatctc
accactaagaggatgatccacgaggggccgctcacatggaaagtcagcaaagacaaagcc
atcgaggtgcaggcgctgctgctctcagatctgctggtgctgcttcagaggggtccagac
gagcgtctcatcctgcgttgtccatcacgctcactgggtggaggcggagctacagatctc
aaaatcccattctgcccaatcgtacgcctcgatttcgccctcgtccgattggttgcgaca
gacaataaagcgctgtatgtgatcagcacgtcagagagccagatttatgagctggtggcc
gggacgtcgtcagaaaagaacacctggaaagatctgctggaaaagacaatcactgcagcc
gctcaagtagcaagattgagcaaacaaggatcaccagcaccgtcatcagatgcgcgttca
tccgccaatccattagatgtgtcggagtcgcccgtgtctctggagcaggactctgctagt
gatgatgaatgtgctctcacacctgacaccacaccaacagatggatcagacgcacgtctg
catgaggacagggatgggatccaaaataaagctggtgtcgcagaagctgctcttcaggat
gtggaaaccctccgacatctgatcttcagagacctggaggatggatggagtcaagattct
gatgacacgcccacaaatgagacagccaatgaaaggagtcctttcacagacagaccggga
gcggagttgtctgatcccgcccccagcgagagtcccagccaatgggaggaggagcgtgta
gaaactccgcctatggaggtgctgcaaccgcctgttcaggttgtgaggaaagttttgggt
gcgggctgttctcttcctgacaacatcaccaatgatgtcaccgccggccaatcctctcgg
gacggagggaacatgttttatctggtcttgcccaaagagcaatccagcgctcacacagac
gagagcagcacagacgagctcaaagactcagacgcgtctgacagcatccatcagactaaa
aacatgctctcatcgtccttcatcaatgaggaagaggaacaggagacgccctgcctctct
ccaaccgaccaatcgctgactgaaacattaagtcaaagggaacggctctgccaatcacaa
ctgagcatccgacaacatgtgatcaagaacgttgatgagatctttaacaccatggaggag
ctgatgaggaaactgcagcacctgagggacattgaagctgatcactacaaactcctgaag
aaattaaaaaagccacttcctgcggataaattgtcaagcgatctcgtctacgagtctccc
agagcggtccgaatgccatcactggaccgcggagcaggagatggtaaagagggcgtctcc
gaaccagctcagccagaaatccagtccactggtttctga
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