Labeo rohita (rohu): 127168186
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Entry
127168186 CDS
T09007
Symbol
katnb1
Name
(RefSeq) katanin p80 WD40 repeat-containing subunit B1
KO
K18643
katanin p80 WD40 repeat-containing subunit B1
Organism
lroh
Labeo rohita (rohu)
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
lroh04812
]
127168186 (katnb1)
Cytoskeleton proteins [BR:
lroh04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Microtubule severing proteins
127168186 (katnb1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
Katanin_con80
ANAPC4_WD40
NBCH_WD40
eIF2A
PROPPIN
WDR54
RMC1_N
Ge1_WD40
Cytochrom_D1
Motif
Other DBs
NCBI-GeneID:
127168186
NCBI-ProteinID:
XP_050970738
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All DBs
Position
7:17642547..17656246
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AA seq
694 aa
AA seq
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MALTNTTITSWKLQEIVAHSSNVSSLVLGKSSGRLLATGGEDCRVNIWAVSKPNCIMSLT
GHTSSVECIQFNSSEERVVAGSQSGSLRLWDLEAAKILRTLMGHKASICSLDFHPMGEYL
ASGSVDSNIKLWDVRRKGCVFRYKGHTQAVRCLAFSPDGKWLASASDDSTVKLWDLIAGK
MITEFTSHTSAVNVVQFHPNEYLLASGSADRTVKLWDLEKFNMIGSSEGETGVVRSILFN
PDGSCLYSGSENTLRVYGWEPDRCFDVVHVGWGKVTDLAISNNQMIAVSYSQNNVSWYVV
DLNRVKKSGSVIQGLIQDKLIPAPKSALGTTLRRNYDRPTTSCTGQEMKQSSEADRRSPE
GERRSPSSEDEKEDKESSAEITNPEDYKEIFQPRSVISRTPPKRSEPFPAPLDNSFSESV
LEKPGSAIKIVTPVIDRAGQLKGPITSSTPVQRVEPTVIAAAPRPVAVVTTSVSSPSRPV
VTTTKPKPSTGIILSTRNEPIGLNAGDFLSHARNAKAGVMGDEEALAQIRKGHDTMCVML
TSRYKNLDTVRSVWASGDVKTSLDSAVSMNDLSIVVDVLNIINLKPSLWKLDLCTSILPQ
IEELLQSKYESYVQTGCMSLKLILKRFWPLISDTLTAPPSVGVDITREERHQKCKACYKQ
LKNLSNVVKNRAEQVGRHGSTFKELQLLMAPLDY
NT seq
2085 nt
NT seq
+upstream
nt +downstream
nt
atggctctcaccaacaccacgataacatcatggaaactgcaggagattgtggctcactcc
agcaatgtgtcttcactggttctggggaaatcgtccggtcgtctgctggcaactggcggc
gaggactgcagagtcaatatctgggctgtcagcaaaccaaactgcattatgagtttgacg
ggccacaccagctctgtggagtgtatccagtttaacagttctgaagagcgtgtggtggcc
ggttctcagtccggctctcttcggctttgggatttggaagctgctaaaattctgcgtact
ttgatggggcacaaagccagtatctgcagtctggattttcaccccatgggagaatacctg
gcgtctggctctgtagatagcaatattaagttgtgggatgtgagaaggaaaggatgtgtg
ttcagatataagggtcacactcaggctgtgcgctgtctagccttcagtcctgatggaaaa
tggctggcttcagccagtgatgacagcacagtaaagctgtgggatctgatagcaggcaag
atgatcactgaattcacatcacacacatcagcagtcaatgttgtgcagttccaccccaat
gagtacctgctcgcctctgggagtgcagatcggactgttaagctgtgggacctggagaaa
ttcaacatgattggctcgtcagagggcgagacgggagttgtgaggagtattttgtttaat
cctgatggtagctgcttgtacagcggctcagagaacacactacgagtgtacggctgggag
cctgaccgctgctttgatgtagtgcatgtaggctggggcaaagtgactgacctggccatc
agcaacaaccaaatgattgcggtgtcctacagtcagaataatgtgagctggtatgttgtg
gatctcaaccgagtgaagaagtcaggatctgtgatccaagggctgattcaggacaaactg
atcccagctcccaaatctgcactgggaacaacactaaggcggaattacgatcgacccact
acatcctgcactggacaggagatgaagcagagttcagaggcagatcggcggagtccagaa
ggagagaggagaagtcccagcagcgaggatgagaaagaagacaaagagagcagtgcagaa
atcaccaacccagaagattataaagagatctttcagccacgcagtgtcatctcacggacg
ccacctaaaagatccgaacctttcccagcacccctagacaattctttctcagagagtgta
ctagagaaacctggctctgcaattaagattgtaacaccagtaatagacagggcaggacag
ttgaaaggtcccatcacctcctctactccagtacaaagagttgaaccaactgtgattgct
gctgctccccgtccagtagctgtggtgacgacatcagtgagctctccctctcgtcctgtg
gttactacaaccaaacctaaaccttctacaggaatcatcctctcaacacgcaacgagcca
attggcctcaatgcaggggacttcctttctcatgcacgaaacgctaaagccggcgtgatg
ggagacgaagaggcattagcacagatcaggaaagggcatgacaccatgtgcgtaatgctg
accagtcgatacaaaaacctggacactgtacgctccgtctgggccagtggtgatgtcaag
acttccctggattcagctgtatctatgaatgatctttctattgtggtagacgtccttaac
ataatcaacctcaaaccatcgctgtggaaattagacctctgcacttccatcttgccacag
attgaggaattgctacagagcaaatatgaaagctatgtacagactggttgtatgtcttta
aagctgattctgaagcgtttttggccgttaatctcggacacgctgactgctcccccatct
gtaggagtggacattactcgagaggagaggcatcagaaatgtaaagcatgctataaacag
ctgaagaacctcagtaatgtagtgaagaaccgggcggaacaggttggtcgtcatggcagc
actttcaaagagctacaactacttatggccccactggactactga
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