Labeo rohita (rohu): 127168195
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Entry
127168195 CDS
T09007
Symbol
scrib
Name
(RefSeq) LOW QUALITY PROTEIN: protein scribble homolog
KO
K16175
protein scribble
Organism
lroh
Labeo rohita (rohu)
Pathway
lroh04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
127168195 (scrib)
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Gene cluster
GFIT
Motif
Pfam:
PDZ
PDZ_6
LRR_14
LRR_8
LRR_4
PDZ_2
LRR_1
LRR_LRWD1
LRR_13
LRR_9
Motif
Other DBs
NCBI-GeneID:
127168195
NCBI-ProteinID:
XP_050970757
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All DBs
Position
7:complement(24022619..24110376)
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AA seq
1921 aa
AA seq
DB search
MLKCIPLWRCNRHVESVDKRHCSLTAVPDEIYRYNRSLEELLLDANQLRELPKPFFRLHN
LRKLGLSDNEIQKLPPDVANFTQLVELDLSRNDISEIPENIKFCQALEIADFSGNPLSRL
PDGFTQLRGLAHLSLNDVSLQSLPNDIGNLSNLVTLELRENLLKSLPSSLSFLVKLEQLD
LGSNVLEVLPDTLGALPNLRELWLDRNQLSSLPPELGNLRQLVCLDVSENRLSELPTEIS
GLIALTDLLLSENLLEVLPDSIGSLKKLSILKVNQNRLVHLTDSIGECENLTELMLTENL
LQSLPRSLGKLKKLTNLNVDRNRLSSVPAELGGCVGLNVLSLRDNRLGKLPAELANATEL
HVLDVAGNRLQNLPFALANLNLKAMWLAENQSQPMLKFQTEDDERTGEKVLTCYLLPQQP
SSSLENLLDRSVDETWPTDTNLNRVSVIQFQDDSKHDEEDEETAAERRQGLQRRATPHPS
ELKVMKNVIEARRNEAYTAKPDEDLESPDSEEKRLSGLSNQSHDSQASSSTASATSQDEK
RGINNTGVESNDGQGQEEEELDEMEVEYTEPTVHFAEEPIIRGGDEEDDDENEVDDEDAE
RSDEDSRTPPLPAEKQRLIRKDTPHYKKHFKITKLPKPETVAALLQGFSHDGLSPTAHTP
EDERDGEEEEEDEEDEGGVTVNTPFQHRLEAAELEDSRLSQMNSSLQPVKGVSFDQVNNL
LIEPARIEEEELTLSILRQTGGLGISIAGGKGSTPYKGDDEGIFISRVSEEGPAARAGVK
VGDKLLEVNGVDLHGAEHHTAVEALRNSGAAVVMTVLRERMVEPENAITTTPLRPEDDYF
PRERRSSGLPFLLDPASPAVSTGPMQRLATCLVRNDKGLGFSIAGGKGSTPYRVGDTGIF
ISRIAEGGAAHRDNILHVGDRVISINGVDMTEARHDQAVALLTGTSPTITLLVERDQASA
GGSSPRTRPHSPPPPEPSDSPEQEEGDEHLGNHLNCPMEDEYPIEEVTLIKAGGPLGLSI
VGGSDHASHPFGINEPGVFISKVIPNGLASQSGLRVGDRILEVNTIDLRHATHQEAVRAL
LSNKQEIRMLVRRDPSPPGMQEIVIHKQPGEKLGISIRGGAKGHAGNPFDPTDEGIFISK
VSSSGAAARDGRLRVGMRILEVGNNSLLGMTHTEAVRVLRAAGDSLVMLVCDGFDPRNAA
SIEASPGVIANPFAAGIVRKNSMESISSVDRDLSPEEIDIMQKEVEMARETSQWEREEME
KVERMRLEREEATRLLEEETENLSTGPLKLDYKTLAALPTTSLQKVNRSSPSEPHRIDSP
VRDAAHSPHNSQQSHKSSSAMLGREVRYSNIHFPSNANTKDNSSTKPGAIQPLSRVRPAV
SPASQDGHSSPNPFQHGLSPINSQTTPRAPSPDTHEEYPINIKQVYKAFAAVPHSLAVLE
PPQDLYSPRNNVSAKQPSPEPELNNEVFMDEADGEGSSPLRSRPSLLSDRREYRNMAAVP
RLSRPSVESKTPTSVGRDSPEQRSFRDRQKYFEIDVKQQTPDKPKPRISLVGEDDLKKMK
EEEAKRLEQRAREYMLDEDEDDEEEDLAKQVADMKAHGKVILDGVEYKVESLGSHSSPSP
RQCATPPSYSATPPSHCDSSGPSSVDGKGDSQRNSMEDSFRLEQRPNSMTGLIPVYPGES
AAPIRTAKAERRHQDRLRMQSPELAVAMDKELSPAEKRALEAEKRAMWRAARPYGLEEDV
KQYEQDLAKRLYQSRVRASLGSAAAPPTSCSSSSCQPRMKSLEQDALKAQMVIAKSKEGK
KRGTLDQLSESPSPAPTPSPTPMEDISPRAVTSPGRLSLSEKKFDYRQFAAIPSSKPVYD
IQSPGAGDDVRFMDDASSNPVSVVDPEVPVATTSALEEMALYSNKRKLRQGRRSLEAPVP
T
NT seq
5766 nt
NT seq
+upstream
nt +downstream
nt
atgctgaagtgtatcccgctgtggcggtgtaaccgtcatgtcgagtccgtggataagcga
cactgctcgctcactgcggtgcccgatgagatctaccgctacaaccgcagtctggaggag
ctgctcctggacgccaaccagctgagagagcttcccaagcctttcttcagactgcacaat
ttgcgaaagctgggcctcagtgacaatgagattcaaaaattaccgcctgacgttgccaac
ttcacgcagctggtggagctggacctctctagaaatgatatttctgagattcctgaaaac
attaaattctgtcaggccttggagattgcagacttcagcggaaaccccttgtccaggttg
cctgatggcttcacacagctcagaggactggctcacctatcactcaatgacgtgtcactg
cagtctctacccaatgacattggaaacttgtcaaacctagtgactctagagctgagggag
aatctactgaaatctttaccctcctccctttccttcctggttaaactggaacagctggat
ctgggcagcaatgtactggaagttttgcctgacacacttggggcactgcccaatcttcgt
gagctttggttggacagaaaccagctctcctcactacctcctgagctggggaacctgcgg
cagctggtttgcttggacgtgtcagagaaccgtctatcagagcttcccacagagatcagt
ggccttatcgccctcacggacctgctgctctctgagaacctcctggaagtcttgccagac
agcattggctcacttaagaagttgtccattctgaaagtgaaccagaaccgcttagtgcat
ctcacagactctattggcgagtgtgagaacctgacagagcttatgttgactgagaatctt
ctacagtccctccctcgttcacttgggaagctaaagaagctgaccaacttaaatgtggac
cgaaaccgcttgagcagcgtgccagcagaactgggaggttgtgtcggcctgaacgtgctc
tctctcagagataaccgtttgggaaaactacctgctgagctcgccaatgccacagagtta
catgtgctagacgtggcaggcaacaggttgcagaatttaccattcgcattggccaatctg
aacctgaaggccatgtggctggcagagaaccagtctcagcccatgctaaagttccagaca
gaggatgatgagcggactggagaaaaagttctcacctgttacctgctgcctcagcaaccc
tcatcgagccttgagaatctactggacaggagtgtagatgaaacctggcccacagacact
aatttgaacagggtatcggttattcagttccaggatgactccaaacacgatgaggaagat
gaggagactgcggcagagaggaggcagggtcttcagaggagagccacaccacatcccagt
gagttgaaggtgatgaagaatgtcattgaagctagaagaaatgaggcttatacagccaag
ccggacgaagatctggagtccccggactctgaggaaaaacggttgagtgggctgtctaat
caaagtcatgattctcaggcatccagtagcactgcctctgccacatctcaggatgagaag
cggggtataaacaacacaggggtggagagtaatgatggacagggtcaagaggaggaggaa
ctggatgagatggaggtggagtatactgagcctactgtgcactttgctgaagagcccatc
atccgtggcggtgatgaggaggacgatgatgaaaatgaagtagatgatgaagacgctgaa
agaagcgatgaggactctcgaacgccacctttacctgcagagaaacagcggcttatacgt
aaagacacaccacactacaaaaagcacttcaagatcaccaagctgcccaaacccgagact
gtcgccgccctgctgcaaggcttcagtcatgacggcctctcacctactgctcacacccct
gaggatgagagggatggtgaggaggaggaggaagacgaggaggatgagggaggagtaacg
gtcaataccccttttcagcacagactagaagcagctgagttagaagacagcagactgagt
cagatgaattcatccctacagccagtgaagggggtgtcatttgatcaagtcaataatctg
ctgattgagcctgctcgaattgaggaggaagagctgaccctgtctatcctgaggcagacg
ggtgggttaggcatcagcatagcaggggggaaaggatctacgccctataagggcgacgac
gagggtattttcatctctagagtgtcagaagaaggtcctgcagctcgcgctggagtcaaa
gtgggagacaaacttcttgaggtgaacggagtggacttgcacggtgcagagcatcacaca
gctgtcgaggccttgcgcaactcaggagcggctgtggttatgaccgttctgcgggaacgc
atggttgaaccagagaatgccatcaccaccacgccgttgagaccagaagatgattatttc
ccccgggagagacggtccagtgggctgcctttcctcctggaccctgcttcacctgctgtc
agcactggacctatgcagcgactagccacttgtctggtccgcaacgataaaggtttaggg
ttcagcattgctggagggaaagggtcaacgccttatcgagtaggagacacgggaatcttc
atctctcgtattgctgaaggaggagctgctcacagagacaatatcctgcacgtgggagac
agggtcatatcaatcaatggtgtagacatgacagaggccagacatgaccaggcagtagcg
ctgcttaccggcacctcccccaccatcaccctcctggtcgaacgggaccaggccagtgca
gggggctcctcccctcgaactcgacctcattcaccccctcctccagagccgtctgactca
cctgagcaagaggaaggagatgagcaccttggaaaccatctcaactgccccatggaagat
gaataccccattgaggaggtgacgctgatcaaagcaggtggtcccctgggtctgagcatt
gtagggggaagtgaccatgccagccatccatttggaattaatgagccaggggtgttcatc
tcaaaggtcatccccaatggcttggcctctcagagtggacttcgtgtgggtgatcgtatc
ttggaggtgaacaccatcgacctacgacatgccacacaccaggaagctgttagagccctg
ctctccaacaagcaggagatccggatgcttgtgcgcagagatccctcgccccctggcatg
caggaaattgtcattcacaagcagcctggagaaaagctgggcatcagcatcaggggtggt
gctaaaggccatgcaggcaacccctttgaccccacagatgagggcatcttcatttccaag
gtgagctccagcggtgctgctgcacgagatggccgactacgggtgggaatgcgtattctc
gaggtgggcaacaacagtctgctgggtatgacacacacggaagcagtgagggtcttgcgt
gctgccggtgactccttggtcatgcttgtgtgtgatggctttgacccaagaaatgctgca
agcatagaggcatcccctggtgttattgcaaacccgtttgcggcaggtattgttcgtaag
aacagtatggagagcatctcatcagtagacagagacttgagtcctgaagagattgacatc
atgcagaaggaggtagagatggcgagggagacgtcccagtgggaacgggaggagatggaa
aaagtggagcgtatgcgcttggagcgcgaggaggcaactcgtttgctggaggaggaaact
gagaatttgagcactggaccactgaaactggactacaagacactggcagctctacctacc
actagtctgcagaaagttaatagatcttcaccatctgagcctcacaggattgacagtcct
gtccgagatgctgcacactctccacacaactcacagcagtcccacaaatcatcttctgcg
atgcttggaagggaggttcgatattcaaacattcatttcccatcaaatgcaaacaccaag
gataattcatcaactaaacctggtgccatccagcctctctctcgggtgcgacccgctgtg
tccccagccagtcaggatggccacagcagtcccaaccctttccagcatggcctctctccc
atcaactctcagaccactcctcgtgccccatcccctgacacacatgaggaataccccatc
aatatcaagcaggtatataaggccttcgcagctgtgccacactccctggccgtattggaa
cccccacaggatctttactctccacggaacaatgtcagcgcaaagcaaccatcaccggag
cctgagctgaataatgaggtgtttatggatgaggctgatggtgagggcagtagtcctctc
aggtctcgtccctccctcttatctgaccgccgtgagtacagaaacatggcggccgtgcca
cgcctgtctcgcccctcagtggagtcgaagacccccacctctgttggcagagatagccca
gagcagcgctccttcagagacaggcagaaatattttgagattgatgtgaagcagcagaca
ccagacaaacccaaacctcgcatctcacttgtgggagaagatgacttgaagaaaatgaaa
gaggaagaagcaaagcgattggagcagagggcacgagagtatatgctggatgaagatgag
gatgacgaggaggaagatctggccaagcaggtggcagatatgaaggctcacggaaaggtt
atccttgatggtgtggagtacaaggtcgagagcttgggaagccacagttctccatctccg
aggcagtgtgccacacctcccagctatagcgccacacctcctagccactgtgacagctca
ggcccttcctccgtggacggtaaaggagactctcagcgaaattcaatggaagacagcttc
agactggagcagagacccaactccatgacgggtttgatcccagtttatcccggtgaatct
gcggctcccattcgaacggccaaagcagaacgcaggcatcaagaccgattacgcatgcag
agcccggagcttgctgtcgccatggacaaggagctgtcgcctgctgaaaaacgagccctg
gaggcagagaagagggccatgtggagagcagccaggccttacggtctagaggaggacgta
aagcagtatgagcaagacctggctaagcgactctaccagtcccgtgtgagggcatctcta
ggcagcgctgcagcccctcccacttcctgctcctcctcttcctgtcagcccaggatgaag
tctctagagcaggatgctttgaaggcccagatggttattgccaagtctaaagaggggaag
aagcgtggaacgttggatcagctgtcagagtcgccgtcccctgcgcccacaccgtctcca
acaccaatggaagatatcagtccacgggcagtgacttcaccaggcagactgtccctgtca
gaaaagaagtttgactaccgacaatttgctgccattccttcttccaaacccgtttacgac
attcagtctcctggtgcaggtgatgacgtgcgcttcatggatgatgcctccagtaaccca
gtgtctgttgtagatccagaagttcctgtggccaccacatctgctctagaggagatggct
ctctacagtaacaagcgcaaactacgacagggccgccgcagcctggaggctcctgtgccc
acataa
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