Labeo rohita (rohu): 127168210
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Entry
127168210 CDS
T09007
Symbol
shha
Name
(RefSeq) sonic hedgehog protein
KO
K11988
sonic hedgehog
Organism
lroh
Labeo rohita (rohu)
Pathway
lroh04340
Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
127168210 (shha)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
lroh01002
]
127168210 (shha)
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
lroh00536
]
127168210 (shha)
Peptidases and inhibitors [BR:
lroh01002
]
Cysteine peptidases
Family C46: hedgehog family
127168210 (shha)
Glycosaminoglycan binding proteins [BR:
lroh00536
]
Heparan sulfate / Heparin
Morphogens
127168210 (shha)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HH_signal
Hint
Peptidase_M15_3
DHQS
Vint
DUF7764
Ribosomal_S6e
Motif
Other DBs
NCBI-GeneID:
127168210
NCBI-ProteinID:
XP_050970778
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All DBs
Position
7:complement(24322822..24330326)
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AA seq
418 aa
AA seq
DB search
MRLMTRVLLVSLLSLSLVVSGLACGPGRGYGRRRHPKKLTPLAYKQFIPNVAEKTLGASG
RYEGKITRNSERFKELTPNYNPDIIFKDEENTGADRLMTQRCKDKLNSLAISVMNQWPGV
KLRVTEGWDEDGHHFEESLHYEGRAVDITTSDRDKSKYGTLSRLAVEAGFDWVYYESKAH
IHCSVKAENSVAAKSGGCFPGSALVTLKDGGRKAVKDLNPGDKVLAADGDGNLVYSDFIM
FTDRDSATRRVFYVIETKEPVEKITLTAAHLLFVLDNSTDDLHSMTAAFASSVRAGQKVM
VVDDSGQLKSVIVERIYTEVHQGSFAPVTAHGTIVVDRILASCYAVIEDQSLAHLAFAPV
RLYYDVSSALFPKNFISQTNATLQQEGVHWYSKLLYQMGTWLLDSHLLHPLGMSVNSS
NT seq
1257 nt
NT seq
+upstream
nt +downstream
nt
atgcggcttatgacgagagtgctgctggtgtctcttctcagtctgtccttggtggtgtcc
ggactggcctgcggtcctggcagaggctacggcagaagaagacatccgaagaagctgaca
cctctcgcctacaagcagttcatacctaatgtggcggagaagaccttaggggccagcggc
agatacgagggcaagataacgcgcaattcggagagatttaaagaacttactcccaattac
aatcccgacattatctttaaggatgaggagaacacgggcgcggacagactcatgacacag
agatgcaaagacaagctgaactcactggccatctctgtaatgaaccagtggccaggggtt
aagctgcgtgtgacagagggctgggatgaggacggtcaccattttgaagaatcactccac
tacgagggaagagctgttgatatcaccacctctgatcgagacaagagcaaatacgggaca
ctctctaggttagctgtggaagctggatttgactgggtctattacgaatccaaagcccac
atccattgctctgtcaaagcagaaaattcggttgccgcgaaatccggaggctgcttccca
ggttcggctctggtcacgctcaaggacgggggacggaaggccgtgaaggacctgaacccg
ggtgacaaggtgctggcggccgacggcgatgggaacctcgtgtacagcgacttcatcatg
ttcacagaccgagactcggcgacgcgacgtgtgttttacgtcatagaaacgaaagaaccc
gttgaaaagatcaccctcaccgctgctcatctcctttttgtcctcgacaactcaacggat
gatctccacagcatgaccgccgcgtttgccagcagtgtcagagccggacaaaaggtgatg
gttgttgatgatagcggtcagcttaaatctgtcatcgtggagcggatatacacagaggtg
caccagggctcgttcgcaccagtgactgctcatggaaccattgtggtcgacagaatactg
gcgtcctgttacgccgtaatagaggaccagagtctggcgcatttggccttcgcgcccgtc
aggctctattatgacgtgtcatcggccctattccccaaaaactttatcagtcagaccaat
gcgactttacaacaggaaggagtccactggtactccaagctcctgtatcaaatgggaacg
tggctactggacagccacctgcttcatcctttggggatgtcagtaaactcgagctga
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