Labeo rohita (rohu): 127168275
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Entry
127168275 CDS
T09007
Symbol
slc6a5
Name
(RefSeq) sodium- and chloride-dependent glycine transporter 2
KO
K05038
solute carrier family 6 (neurotransmitter transporter, glycine) member 5/9
Organism
lroh
Labeo rohita (rohu)
Pathway
lroh04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
127168275 (slc6a5)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
lroh02000
]
127168275 (slc6a5)
Transporters [BR:
lroh02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
127168275 (slc6a5)
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Motif
Pfam:
SNF
Motif
Other DBs
NCBI-GeneID:
127168275
NCBI-ProteinID:
XP_050970944
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Position
7:complement(40854474..40868931)
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AA seq
773 aa
AA seq
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MDFSEHGEMLRQPSNSIPPQPSGGAVGTTNKPENGNPVLQPPPVNERKTFCPSENKPCDM
EANKAYGTFKNAAPGPTFAPVNSAVRKDSVGKMDGSTGKATSDFMSNNQSAVRIAAEHNN
TTGDWTSMSQTTIILGTDGNTSVLPGTLTGEEDDDDGGDENKARGNWSNKLDFILSMVGY
AVGLGNVWRFPYLAFQNGGGAFLIPYLIMLGLAGIPIFLLEVSLGQFASQGPVSVWKAIP
ALQGCGIAMLIISVLIAIYYNIIMCWTLYYLFASLKETLPWATCNNEWNTVECKDKDMLL
LDSCILRDRNITSIKNTTFCLSANAVGNLTKLLNVTSDNKTYVSPSEEYFKYNVLHISKG
IEYPGDIRWPLAACLFLAWLIVYASLAKGIKSSGKVVYFTATFPYVVLVILLIRGVTLPG
AGSGILYFITPKWEKLNDAKVWKDAATQIFFSLSAAWGGLITLSSYNKFHNNCYRDTLIV
TCTNSATSIFAGFVIFSVIGFMAHELKVPIESVADEGPGIAFVVYPEALTRLPLSPFWAI
IFFLMLLTLGLDTMFATIETIVTSVSDEFPKYLRKHKPLFTLVCCLSFFVLGFPMITESG
MYMLQLVDTYAASYSLVIIAIFELVGVSYVYGLQRFCEDIEMMIGFQPNKFWRICWAFVT
PTILTFILALSLYQWKVMTYEDYTYPTWSMVLGWLMVICSVIWIPIMFVIKMHLAPGSFI
ERLKLVCSPQPDWGPFLMKHRGERYKNMIDPLGTNSLGLKLPPKDFQLSAQYQ
NT seq
2322 nt
NT seq
+upstream
nt +downstream
nt
atggatttttccgagcacggggaaatgttgagacagccgtcaaacagtattccgccccag
ccgtctgggggagcggttggaactactaacaaaccggagaacgggaacccggtgctccaa
ccgccgcctgtgaacgaacggaaaactttttgtccctcggaaaataaaccctgcgacatg
gaagccaataaagcatacgggacgtttaaaaacgccgcacctggacccacgtttgctccc
gttaattctgccgtgcgcaaggattccgtcggtaaaatggatggttcgaccggtaaagcc
acgtcggacttcatgtctaacaatcaaagtgctgtaaggatcgcggcggagcataacaac
accaccggtgactggacctccatgagccagaccaccatcatcctgggtacagatggcaat
acatctgttctgcctggcacattgaccggggaggaggatgatgatgatggaggagatgag
aataaggccagggggaactggtccaacaaactggattttattctgtccatggtgggatat
gccgtgggtttgggaaatgtgtggagattcccatatcttgctttccagaatggtggaggt
gcgtttttgataccttacctaatcatgttaggcctcgccggtattcctatatttttgttg
gaggtgtctttgggtcagttcgccagccaaggcccggtgtcagtatggaaagcgattcca
gctctacaaggttgcgggattgccatgttgataatatctgtcttgatagccatatactat
aatattattatgtgctggacattgtactacctgttcgcttcgttgaaggagacactgcca
tgggccacctgtaataatgaatggaacaccgtcgagtgcaaagacaaagacatgctgctt
ttggactcctgtatactaagggacagaaacatcacatcaatcaagaacactacattctgt
ttatctgcaaatgctgtcgggaatttgactaaactcttaaatgtcacatcggacaataaa
acctatgtcagccctagtgaggaatatttcaagtataatgtgttgcatatttcgaagggt
attgaatacccaggtgacatccgttggcccttggctgcttgcctttttctggcttggctt
attgtttatgcctctttggctaaagggatcaagtcctcagggaaggtggtgtatttcact
gccacgttcccctatgtggtgttggtcatcctgttgatccgtggggtcactctgcccgga
gccggttctgggatcctttacttcataacacccaaatgggaaaaactcaatgatgccaag
gtgtggaaggatgctgctacacagattttcttctctctgtctgcagcatggggtggtctt
ataaccctgtcgtcctacaataagttccataataactgttacagggatactctcatcgtg
acgtgtactaacagtgccaccagtatttttgctgggtttgtcattttttcagttattggc
ttcatggctcatgagctcaaagtcccaattgagagtgtggcagatgaaggtcctgggatt
gcatttgtggtctacccagaggctttgactaggttgcccttgtcaccattctgggctatc
atcttcttcctcatgctgcttacacttggtctggataccatgtttgccacaatagaaact
atagtgacatctgtttccgatgagttccccaagtacctgcgcaaacacaagcctctgttc
actttggtttgctgtctgtccttttttgtgctgggcttccccatgatcactgagagtgga
atgtacatgcttcagctggtggacacctatgcagcctcttactctctggtcatcatagcc
atattcgaactggttggagtctcatacgtttatggtctacagcggttctgtgaggacatt
gagatgatgattgggttccagccaaacaagttttggagaatctgctgggcctttgtcaca
ccaaccattctcacatttattttggcactcagtttgtaccagtggaaggtgatgacatat
gaggattacacttatccaacctggtctatggttctcggctggcttatggtcatctgttct
gtcatatggattcccattatgtttgttattaagatgcaccttgcacctggatcgtttatt
gagcgtctgaagttggtgtgctctcctcagcccgactggggtccattcctgatgaaacac
cgtggggaacgctacaagaacatgatcgacccactgggcaccaactccctcggcctcaaa
cttccccccaaagatttccagctatcagcccaatatcaataa
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