Labeo rohita (rohu): 127168318
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Entry
127168318 CDS
T09007
Symbol
cilp
Name
(RefSeq) LOW QUALITY PROTEIN: cartilage intermediate layer protein 1
KO
K24436
cartilage intermediate layer protein
Organism
lroh
Labeo rohita (rohu)
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
lroh04990
]
127168318 (cilp)
Domain-containing proteins not elsewhere classified [BR:
lroh04990
]
Thrombospondin domain-containing proteins
Other thrombospondin domain-containing proteins
127168318 (cilp)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
CILP_C
CILP_8th
CILP
CILP_5th
Mucin2_WxxW
Ig_3
I-set
Ig_2
ig
CarbopepD_reg_2
CarboxypepD_reg
TSP_1
V-set
TSP1_CFP_C
Motif
Other DBs
NCBI-GeneID:
127168318
NCBI-ProteinID:
XP_050971076
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All DBs
Position
7:31342151..31350121
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AA seq
1150 aa
AA seq
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MGCLSTWIFLLFLSGITGTFSQDDYEWTTWFNVDHPGGKGDYEKLNAIRFYYRARVCEVP
RALEARTTEWIPARSTGERVHADPTVGFWCVNDEQPVGRNCSNYAVRFLCPKEIVPEVEE
VVWGPWSDWSLCPAQCDHVAIQHRSRSCRSTSKQCNGQTVEARSCKGPPCPRCDLQCVMG
KVNDECNGCMCLDHTVLGSVRSAGGLPAPGAAILRAGSSPKLLTVTDHNGHFQVPGICPD
GNTTLMIKLKNHAPHQVAVPPSTERTSVVHLKLERAKKLYVLKNPENKARREGQTAAFCC
KIDGTPEPNQYEWFHNDTLLDRSQYQYDETLVLRNLTLDHTGEYYCRASNENGAIKSKPA
TLTVIGQTAPSCNPKPDSHPIRLPHDCFQNETNSFYYDVGKCPTSTCTGKLDNGIRCKDS
VSYCCGISNMEKKEITCQGYQLPIMVVTQCGCKTCVDTKAIVRGRAIAADTGEPMRFGHV
YMDGTRVSRTGYKGTFSIQVPTNTERLVLTFVDNMQKFVNTTKVLPFNPKGGAVFHEIKL
LRKKPAVIISSRETNKLDLGEAKGQDPIAEIEIPPNAFYKENGEVFMGNVKASVTFLDPR
DVSTAAAAQSDLNFIGDEGDTLPLRTYGMFSVDFRDEEGGEPLNAGEVKVRLDAAQVKMP
EHLKTMKLWSLNPDTGLWEEEGQFHAEKKQRGKREERTFLIGNMEIRERRLFNLDVPENR
RCYVKVRAFRSERYMPSEQTEGVVMTLINMEPTPGFSTNPRAWGRFDSVITGPNGACLPA
FCDEQKPDAYSAYVMANLGGEELEAVASSPKLNPNIIGVPQPYLNKLNYRRTDHDDPRIK
KTAFSINVAKPRSNTAEEANGPVYPFDKLKECEEAPFSAAHFRFSRVEGDRYDYNTVPFN
EDDPMSWTEDYLSWWPKPMEYRACYIKVKLNSAHELNIRSRNMGGTHPKTVGQLYGIRDT
RSIRDMDQSTVSAVCLEFKCSGMLYDQDRVDRTLVKVMPQGSCKRDSVNSMLQEYLVNHL
PLAVNNDTNEFTMLAPLDPLGHNYGIYTVTDQDPRTAKEIALGRCFDGTSDGTSRVMKSN
AGVALTFTCGDKEVTRQSMFQQMQNSLGQATAGSARPGRGNRRQRGGSTAPRNSKRRSTR
NSYTRAQTIG
NT seq
3453 nt
NT seq
+upstream
nt +downstream
nt
atgggctgcctctcaacatggatctttcttctgtttctgtcgggaattacaggcaccttt
tctcaagatgattatgagtggactacatggttcaatgtagatcaccctggagggaaggga
gactacgaaaagctgaacgccattcgtttttattatcgagcccgtgtctgtgaggttcct
cgagctctagaggcacgcactaccgagtggatcccagctcgcagcaccggggaaagagta
catgctgacccaactgtgggcttctggtgtgtcaatgatgaacagcctgttgggaggaac
tgctcaaactatgctgtacgtttcctgtgccctaaagaaattgttccagaagttgaagaa
gtggtatggggtccatggtcagactggagtctgtgcccagctcagtgcgatcacgttgca
atacagcatcgctctagaagctgcagatccacttccaaacaatgcaatggccaaactgtc
gaggctaggtcatgcaaagggccaccttgtccacgctgtgatctgcagtgtgtgatgggc
aaggtaaacgatgagtgcaatggctgcatgtgcctggatcataccgttttaggatcagtc
cgtagtgccgggggtctccctgcacctggagctgccatcctccgtgctgggtccagcccc
aaactccttactgtaactgatcacaatggccattttcaagtccctggaatctgcccagat
ggcaacacgacactaatgatcaagctgaaaaaccacgctccacaccaagttgctgtgccc
ccaagcactgaacgcacctctgttgtccatttgaagctggagagagcaaaaaaactgtat
gtgttgaaaaaccctgagaacaaggccaggagggaaggtcagacagctgccttctgttgt
aagattgatggcacacctgaacccaaccagtatgaatggttccacaacgatactctgctg
gacaggagtcaatatcagtatgacgagacattggttctgaggaatctcactttggaccat
acaggagaatactactgcagagccagcaatgagaacggagccatcaaatctaagccagcc
acccttacagttattggtcaaacggcaccatcatgcaaccctaagcctgattcccatccg
atccgactaccacacgactgctttcaaaacgagactaactctttctactacgatgtggga
aaatgcccaacatctacgtgcacagggaagctggataacggcatcagatgcaaagactca
gtttcctactgctgtggaatttcaaacatggagaagaaggaaattacatgtcagggatat
cagttgcccatcatggtagtgactcagtgtggttgtaaaacatgtgtggacacaaaggct
atcgttcgtggacgtgctatcgcagcagacaccggtgagcccatgaggtttggacacgtc
tacatggatggcacaagagtaagtcgaactggatacaaaggcacattctctatccaggta
ccaacaaacacagagcgtctggtcctcaccttcgtggacaacatgcagaagtttgtgaat
accaccaaagtgctaccattcaatcctaaaggtggagctgtgttccacgagatcaagctg
ttgaggaaaaagccagctgtgatcattagctcaagagagactaataagctagatcttggt
gaggcaaaaggccaggatcccattgctgagattgagatcccaccaaatgcattctataaa
gaaaacggagaggtgttcatgggaaacgtcaaggctagtgtgactttcctcgaccctagg
gacgtatcaacagcagcggcagcccaaagtgatcttaacttcattggtgatgaaggtgac
actctgcccttgaggacctatggaatgttctctgtggactttagggatgaagaaggaggt
gagccgctcaacgccggagaggtgaaagtgcgtctcgatgcagcacaagttaagatgccc
gagcacttgaagacaatgaaattatggtcccttaatcctgatacaggtttgtgggaggag
gaaggccagttccatgctgagaagaagcaacggggaaaaagagaggaaagaaccttcctc
ataggtaacatggaaatccgtgagagacggctgtttaacttggatgttcctgagaacagg
agatgttacgtgaaagtgcgagctttccgcagcgaacggtacatgcctagtgagcaaact
gaaggagtcgtgatgactttaataaatatggagcccacgccagggttttcaaccaaccct
cgggcttggggtagatttgatagtgtcatcactggcccaaatggtgcatgtcttccagcc
ttctgtgatgaacagaaaccagatgcatattcagcctacgtcatggcaaacctcggggga
gaagagctagaggcagtagcatcttctccaaagttgaatcctaacatcattggcgtcccg
caaccctacttgaataaacttaactacagacgtacagaccatgacgatcccagaataaaa
aagacagcgttcagcatcaatgtggccaaacctcggtcgaacaccgctgaggaggccaat
ggtccggtttatccatttgataaacttaaagagtgtgaggaagctccattcagtgcagct
catttccgtttctcaagagttgaaggagatcggtatgattacaacacagtgccttttaac
gaggacgatcccatgagctggactgaagactatttgagttggtggccaaagcccatggaa
tacagggcctgctacattaaggtaaaacttaacagcgcccatgagctcaacattcggtct
cgtaatatgggaggtacccatccaaaaaccgttggccaactgtatggcattcgagacacc
aggagcatccgagatatggaccaatcaactgtttcagcagtgtgcctggagtttaagtgc
agcgggatgctgtatgatcaagaccgagtggatcggactctcgtgaaagtaatgcctcag
ggcagctgcaagcgagacagtgtgaacagcatgctacaggaatacttggtgaaccacctt
ccactggctgtcaacaacgacacaaatgagttcaccatgcttgcacctctagacccactg
ggccacaactacggtatatatacagtgactgaccaagatcctcggacagccaaagaaatt
gcacttggccgttgctttgatggtacatcagatggcacctctcgagtcatgaagagcaac
gcaggagtggcattaacattcacctgcggtgataaagaggtcaccaggcagagcatgttc
cagcagatgcagaactcactgggtcaggccacagctggaagcgcaaggccgggaagagga
aaccggaggcagagagggggctcaacagcacctcgcaatagtaaaaggaggagtactcgt
aattcttacacacgtgcccaaaccattggttga
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