Labeo rohita (rohu): 127168336
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Entry
127168336 CDS
T09007
Symbol
si:ch211-286b5.4
Name
(RefSeq) afadin- and alpha-actinin-binding protein
KO
K06085
synovial sarcoma, X breakpoint 2 interacting protein
Organism
lroh
Labeo rohita (rohu)
Pathway
lroh04517
IgSF CAM signaling
lroh04520
Adherens junction
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
127168336 (si:ch211-286b5.4)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
127168336 (si:ch211-286b5.4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
lroh03036
]
127168336 (si:ch211-286b5.4)
Chromosome and associated proteins [BR:
lroh03036
]
Eukaryotic type
Centrosome formation proteins
Pericentriolar materials (PCM)
Centriolar satellite
127168336 (si:ch211-286b5.4)
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Ortholog
Paralog
GFIT
Motif
Pfam:
SF3b1
Motif
Other DBs
NCBI-GeneID:
127168336
NCBI-ProteinID:
XP_050971103
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All DBs
Position
1:14216891..14222599
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AA seq
432 aa
AA seq
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MAHKQVARSPTSHIRVQDCSEMLSSVIVPLCPNETTHSFSHRIFREEHRDLTNSLQEQII
EKDLHISRLQDALTSEREKCARLQCRCNQQAAELKRREQHNNRMKEKLSQLTDRHKHRGV
SMEIINVLPKRTGRREPGFKTARADGRTEEALRLLLDRREAELREVMKLRHGLTTLLHML
RNNMEQTLRDKNGTELEDETDDNVLVQSEQCLGDHVTGGVVQEWMQVQKRLRELISKSPV
ALGTDQEKLMAHLEEELEQSRHLIRAQQQLLQDSVTSPLPAVLMDCYYLEEWERLQDHWE
EFNRQRRSFQQERQAFTEAAIRLGHERCEFERQKAFRLKSDFLTLSPVKKTSRWNRREST
ALSDLRAAVPEQLSLSPCATPSSEGSEITPGSRQNMVMTPNTPELYSALKLPYYRSERIL
HSPDERNTDWPF
NT seq
1299 nt
NT seq
+upstream
nt +downstream
nt
atggcacacaaacaggttgcaagatctccaacatcccatataagagtgcaggactgctca
gagatgctgagctctgtgattgtgcctctgtgtcctaatgaaaccactcacagcttctca
cacaggatctttagagaagagcacagagacctcaccaactcattacaggagcagattata
gagaaggacctccacatctccagactacaagatgctctgacctctgaaagagaaaagtgc
gctcggctgcagtgtcgctgtaaccagcaggcggcggagctgaagcgcagagagcagcac
aacaaccgaatgaaagagaaactctcgcaactcaccgacagacacaaacaccgcggcgtc
tccatggagataataaatgttttgccaaagcggacaggacggagagagcctggcttcaag
accgcaagggctgatgggaggacagaagaagcactgcgtctgctgttggaccgaagggaa
gccgagctcagagaagtgatgaaactacgacacggccttactacactactgcacatgctt
agaaataatatggaacagacactacgagacaaaaacggtacagaactggaggatgagacc
gatgacaacgtgctggtccaatcagagcagtgccttggtgatcatgtgaccggaggtgtg
gtccaagagtggatgcaagtccagaagagacttcgggagctcatctcaaagagtcctgtt
gctctaggaacagaccaggaaaagctgatggctcatcttgaggaagagctggagcagagc
agacatctgatccgggcgcagcaacagttactgcaggacagtgtaacttcacccctcccc
gctgtgctgatggactgctactatctggaggagtgggagcggctacaggaccactgggag
gagtttaacaggcagaggcggagcttccagcaagagcggcaggcctttactgaagctgct
atccgactgggtcacgagagatgtgagtttgagcggcagaaagccttccggttgaagtca
gacttcctcactctttctcctgtcaagaaaacctcgaggtggaacaggagagaaagcaca
gcgctcagcgacctacgtgcagccgtaccggagcagctctctctgtctccatgtgccaca
ccatcatctgaggggtcagagatcacgccgggttcccgtcagaacatggttatgaccccc
aacacccctgagctgtactcggctcttaaactgccttactacaggtcagaacggatcctc
cactcgcctgatgaacgcaacacggactggcccttttaa
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