Labeo rohita (rohu): 127168339
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Entry
127168339 CDS
T09007
Symbol
slc1a1
Name
(RefSeq) excitatory amino acid transporter 3
KO
K05612
solute carrier family 1 (neuronal/epithelial high affinity glutamate transporter), member 1
Organism
lroh
Labeo rohita (rohu)
Pathway
lroh04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
127168339 (slc1a1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
lroh02000
]
127168339 (slc1a1)
Transporters [BR:
lroh02000
]
Solute carrier family (SLC)
SLC1: High-affinity glutamate and neutral amino acid transporter
127168339 (slc1a1)
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GFIT
Motif
Pfam:
SDF
CENPU
Motif
Other DBs
NCBI-GeneID:
127168339
NCBI-ProteinID:
XP_050971104
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Position
7:5442960..5467877
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AA seq
527 aa
AA seq
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MDMLGKKERRGRDVKGLLKRNWVLIATITSVILGIGLGVLVRDYTSLSQLDKQYFGFPGD
ILMRMLKLVILPLIVSSMITGVAALDSEVSGRIGLRAVVYYLSTTIIAVILGIVLVTTIK
PGVSQSAENLERAGSTPNVTTVDTLLDLIRNMFPENLVQACFQQYKTQRKEIEPPKTNIN
TTNTTTFPPFTTIISAVAQNLTKDYKIMGSYSDGINVLGLIVFCVTFGLVIGKMGERGRI
LLEFFDALNEATMRIVQIIMCYMPIGILFLIAAKIIEVDDWEIFRKMGMYMVTVLSGLAI
HSMIFLPLIYFVFVRKNPFTFTLGMAQALLTALMISSSSATLPVTFRCAEENNRIDKRIT
RFVLPVGATINMDGTALYEAVASIFIAQLNNLDLDAGQIVTISITATVASIGAAGVPNAG
LVTMVIVLTAVGLPASDVTLIVAVDWLLDRFRTMVNVLGDAYGAGIVQKLSKRELERMDL
TSDVDAANPFALETTLDDDECEKKSYVNGGFTIDKSDAISFTETSQF
NT seq
1584 nt
NT seq
+upstream
nt +downstream
nt
atggatatgctggggaagaaagagcggagaggcagggatgtgaagggattgttgaagagg
aactgggttctcatagcaaccatcacctcggtgatactggggatcgggctgggagtgctg
gtgcgggactacacctctctgtcccagctggacaaacagtactttggcttcccaggagat
atcctgatgagaatgctaaagctggtcatcctgcccctcatcgtctccagcatgataaca
ggagtggcagcgctggactctgaggtgtcgggcaggatcggtcttcgtgccgttgtttat
tacctctccactaccatcattgctgtcattcttggaatcgttcttgtgacgacgattaaa
cccggggtctctcagagtgctgaaaatttagagagagcaggaagcactccgaatgtgacc
actgttgacaccctgctggaccttattaggaatatgtttcctgaaaatcttgtgcaagcc
tgttttcagcagtataagacgcagcgcaaagagattgaaccaccgaaaaccaacataaac
acaactaatacgactacattcccaccgttcaccaccattatttcagcagttgcacagaat
ttgaccaaagactacaagatcatgggctcatattcagatggcattaatgttcttggtctg
atcgtgttctgtgtgacttttggcctggtcatcggcaagatgggagaaaggggccgaatc
ctgctcgagttctttgatgctctgaatgaggccaccatgagaattgttcagattattatg
tgctacatgcctatcggcatcttgttcctaatcgccgccaagatcatcgaggtggacgac
tgggaaatcttcaggaagatgggcatgtacatggtgacagtgctcagcggactagccatc
cattccatgatattcctccccctcatatactttgtgtttgtgaggaagaatccattcacc
ttcactctgggaatggcacaggctttgctaacagctctcatgatttcctcaagctcagcc
actctgccggtcacgttccgatgcgcagaggagaacaacaggatcgacaagagaatcacc
cgtttcgtccttccagtcggtgcgactatcaatatggacggcactgcgctgtatgaagcc
gttgcttctatattcatagcccaattgaacaacctcgacctggacgctggccagattgtt
accattagtatcacagcaacagtcgccagcatcggtgcagcaggagttccaaatgctgga
ctggtaaccatggtgatagtcctcacagcagtgggccttcctgccagtgatgtcaccctc
atcgtcgctgttgattggctgctcgatcgcttccgtaccatggtcaacgtgctgggagac
gcctacggcgctggaatagtccagaagctgtcaaaacgagaactagaaaggatggacctg
acttcagacgtggacgcggccaaccccttcgccctagagaccacgctggacgacgacgag
tgcgagaagaaatcttacgtgaacggtggattcaccatcgacaaaagcgacgccatttcc
ttcaccgagacctcgcagttctag
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