Labeo rohita (rohu): 127168362
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Entry
127168362 CDS
T09007
Symbol
lrrc4cb
Name
(RefSeq) leucine-rich repeat-containing protein 4C
KO
K07523
netrin-G1 ligand
Organism
lroh
Labeo rohita (rohu)
Pathway
lroh04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
127168362 (lrrc4cb)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
lroh04515
]
127168362 (lrrc4cb)
Cell adhesion molecules [BR:
lroh04515
]
Immunoglobulin superfamily
NGL family
127168362 (lrrc4cb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
LRR_1
I-set
Ig_3
LRR_14
ig
LRR_9
V-set
Ig_2
LRRNT
LRR_RPS2
DUF7617
LRRCT
Sp38
Syndecan
Motif
Other DBs
NCBI-GeneID:
127168362
NCBI-ProteinID:
XP_050971160
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Position
7:complement(18457139..18491419)
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AA seq
631 aa
AA seq
DB search
MLNKMTSYHQRQMLRGPRWKGAWFDPLFLLLLALQLLVVAGLVRAQTCPSVCSCSNQFSK
VICTRRGLKDVPDGVSTNTRYLNLQDNQIQVIKVDSFKHLRHLEILQLSRNHIRNIEIGA
FNGLTSLNTLELFDNRLTTIPNGAFEYLSKLKELWLRNNPIESIPSDAFSRLPSLRRLDL
GELKRLSYISSGAFQGLSNLRYLNLGMCNLKEVPNIQPLIRLDELEMSGNQLTVIQPSSF
KGLVHLQKLWMMHAQVQTIERNSFDDLHSLRELNLAHNNLTFLPHDLFTPLHHLQRVHLH
HNPWNCNCDILWLSWWLKETVPTNTSCCARCNSPPSLKGRYIGELDQSYFQCYAPVIVEP
PADLNLTEGMAAELKCRTNSVTSVSWLTPNGSIITHGALKMRISVQNDGTLNFTNVTIQD
TGTYTCIVSNMLGNISASAVLNVTSVDNSGFSYFTTVTVETIETSIDGESRTPVQPSFGW
ASSSTTKGTPIATERAYTIPVTDIDIDGALNGLEEVMKTTKIIIGCFVAITLMAAVMLII
FYKMRKQHHQQDHDGPARTIEIINVHEELTRVPAMESHLTLPPLEHEHYNHYNSYKTAYN
HVSALSSLHSSVHEPLLIQASSKDNVQETQI
NT seq
1896 nt
NT seq
+upstream
nt +downstream
nt
atgttgaacaagatgacctcttaccatcagcgccagatgttgagaggtcctagatggaaa
ggggcttggtttgaccccttgtttctcctgcttttagccctgcagttgcttgtcgtcgcc
ggattggtacgagcgcaaacctgtccttccgtatgttcctgcagtaatcagtttagtaag
gtcatctgcacacgcagaggtctgaaggatgtccctgacggcgtctccaccaacacacgg
tatctaaaccttcaggacaatcagatccaggtcatcaaagtagacagtttcaagcatctg
cgacaccttgagattctgcagcttagcagaaaccacatccgcaacatcgaaatcggcgcc
ttcaatgggctgaccagccttaacactctggagctttttgacaatcgcctcacgaccatc
ccaaatggcgccttcgagtatctatcaaaactgaaagagctgtggcttaggaataaccct
atagagagcataccgtctgatgccttcagtcgcttgccctccctgcggcgcttggacttg
ggagagctgaagcgtctctcctacatttcaagcggagcatttcagggcttgagtaacctt
cgctacctgaatctgggcatgtgtaacctcaaagaggtccccaatattcagcccttgatt
cgcttggacgagctggagatgtccgggaaccagctcaccgtcattcagcccagttctttt
aagggtctcgtccatcttcagaagctgtggatgatgcacgcccaagtccaaaccatagag
cggaactccttcgacgacctgcactctttgcgagagctcaacctggctcacaacaacctt
acctttttgccccacgatctcttcacgcctttgcaccacctgcagcgagtgcatttgcat
cacaatccctggaactgcaactgtgacatcctttggctgagctggtggctgaaagagacc
gtgccaacgaacaccagctgctgcgcccgctgcaattcccctcccagcctcaaggggcgc
tacatcggtgagctagaccagagctactttcagtgctacgcgcccgttatcgttgagccg
cctgccgacctcaatttgactgaaggaatggcggcagagctcaaatgtcggacgaattca
gtgacctcggtcagctggctaacaccaaatggctccatcataacacatggggcgctcaag
atgcgcatctccgtccaaaacgacggaacactaaacttcaccaacgtcaccatccaggac
acgggaacctacacttgcatcgtcagcaacatgctaggcaacatttcagcctctgcggtc
ctcaacgtgacgtccgttgacaacagcggctttagttacttcactacggtcactgtagag
acaattgaaacctctatcgatggggagagcaggacacctgtgcagccttctttcggctgg
gcgtcctcctcaaccacaaagggaacacctatcgccacagagagagcgtacaccattccc
gtgactgacatagacattgacggcgctctcaatggtttggaggaagtgatgaaaaccacc
aagatcatcattggctgctttgtcgccatcacactcatggcggccgtcatgctcataata
ttctacaagatgcgcaagcagcaccaccagcaggatcacgatgggccggcccgcaccatc
gagatcatcaacgtacacgaggagctgacgagggttccggccatggagagtcacctgact
cttccgcccctggagcatgagcattacaaccactataactcctacaaaactgcttataac
catgtgtctgctctcagctcgctgcatagttcagtgcatgaacctttactaatccaagcc
agctcaaaggataacgtgcaggagacgcaaatttga
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